Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0302900 |
Transcript ID | LotjaGi1g1v0302900.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Zinc finger with UFM1-specific peptidase domain protein; TAIR: AT5G24680.1 Peptidase C78, ubiquitin fold modifier-specific peptidase 1/ 2; Swiss-Prot: sp|Q96AP4|ZUFSP_HUMAN Zinc finger with UFM1-specific peptidase domain protein; TrEMBL-Plants: tr|G7J9Q3|G7J9Q3_MEDTR Zinc finger with UFM1-specific peptidase domain protein; Found in the gene: LotjaGi1g1v0302900 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:73854936..73861109) extracted from Lotus japonicus Gifu genome v1.2.
AAAGGTAACATGGATGCAGATTCATGGACTAGTTGCCCTTTCTGCGATTCAACAGTCCCCTCATCCCAAATCAATCGGTA TGTTTGCGTTTTCCTTTCTTCTTCCCCATATAATATCGTTATATCAATATAATATGATTCTGCAAATGCAGGCACGCCAA TGCTCACTTTGAAGATGATCCTGAGCTACCCCAACATATTCATTTTCCCCCTAATTCCCACCTTCAATCATCTCTTCCGG TACTCCCATTAACAAATCTATGTCGTATATTTACCCGGTTTGGAAGAACTTATTTAAGCTTATTTTATAACATACTGGTT ATACAAATGTTCGAGAGAACTTATGAAAATACCTTATTTCGTATCTATAAGCTGTTTTGAGTTCGTTTTGATAAATTCTT CAAATTGGCTTACGAATAAGCAGTCGTGCTTATTTATAACATATTTTCAATTTTTTTCAATAAGTTTCTTAAATTATAGG CGCTTAAGCTGTTTACCCAAACGCACTCATTGTCTAATATCATATTTTGCAGAGTGAACAAACAGACAATGACTTGCAGT GCGGAGCAAATTCTGGAGAGTGTGGTGGTGAAACTAGTAGAGATAGCGGGGAATGCAAAATGGATGATAAGTTATCTTGC TTGATTGGTTTACAGGCGAGGAGTGAATTTTGCAAAGTTGAAGGGGGTTTGATGGCTTTGTTAAGAGATTGTTTGGAGTG TGAAGCTGAAAATTCGAGAAGCGTTTTATCTGGGTATGTTGATCATTTCCAGAGTCTTCAGTCTGAGGATTCTGGTTGGG GTTGTGGATGGCGTAACATTCAAATGCTTAGCTCTCACTTGCTAGTGCAAAGGCCAGAAGCAAGAGAAGCTTTGTTTGGG GGTTCGGGATTTGTTACGGATATCCCTTCGCTCCAGAGATGGCTTGAGATTGCTTGGGAGAAGGGTTTTGATGCGCCTGG ATCGGCTCAATTTGATCATGTTGTTTATGGTTCAAAAAAATGGATAGGAACTACTGAGTGCGCAGCTCTTTTGCGATCCT TTGGTCTTCGAGCGAGAGTAGTGGATTTTGGTCCCAAGGAATCCCAATCTGCCTCAGGTTCAAGTGTTGATAGCACTATG AATACAGCAAATACTAGTAAGATGGTAGAAAGTAAAGATAAAAAAGGTGAGGCTTATCAAGTTCTCATGGATTTTGTGTG GAATTACTTTTCTGATGAAAGCTCAATCCAATTTGGTCAACAGTGTGTTGTGGTCAGTGAAAAAATGTGAGGGCACATTT TAGATACATTTCTCAATCACACAAATAATTTTGTTTCTTATGGTGTTTAATCTTTGAAAGCTTTCTTGGACAGGCCCTTA TACTTTCAACATGCTGGTCACTCAAGAACAATAGTTGGAATTCATGTCAAACATCAAGAGACTGGAATTCTACAATATAA TCTCCTTGTTCTGGACCCTGCTCATGTAATTTATCTGCAACGCAAGCTTCACATTTTGTTATCAATATCTAATTTCTTGA TTGTAATTTAGATTACTTTAAGAAATTGCATGTCATATAGGCGTCTTTTTGCTTTATCATAGTCAATAAGATAAATAGAA AAAATACCAGAGGTAGTGAAGTGGACATTTTCCTGAAAATGTTTTGCTTATACTAAGGAGTAAGGACTACTTTGAGAATG GAAGGACAAGTAGTATTTTGCCAATACATTTGTAGGGATCCAAAAAATGATGGTCTTACTAATTTCCAAGATCCTAGAAA ATAGATGACTCAAAACTCTTAATATATGAGCAGATAGCTCAAGCTGATCATTCTTTTACTTACGGAAAATAGGTGGATAT AGGTAAAATGCCAAGAACTGAAAGAAGACCTAAGGCAGAGAAAATCCTGAAATGTGAATATATTACTTGGGAGAGATTCG TGTTCTTATTGTATAAAGTCAGCTAGAATCCAGAAAATGGGGAAAACGTTGCTTACTAATCCCCTTCTGCTGTTCTTTAC GTTTACGAGCTAAAATTAAAGTAAATGTTTGTCTCTTCTTCTCTTTGTTGTTGTTATGATTATTATTATTAAGTACAACT AAACTAGTTTTGAGATTACCTTCTTTTAGTATTTTTTTAGTTTTCTTTTCAAGTATTTTATTTGTCCAAATGATTTAAAA AAATTAATACATTAATTTTGATTAATACATTAATTTTGATTGGCACAAGGGTCAAACTACAAAGAAAAGCATATCAGAAT TAGGATGATCATGATAGTCCTCACTCATTGTTTTATCTGATTTTTTATGAGCTCTGTAATTCATATATTTGTTTCTTGAT TTCTTCCTCTCTGTTCACACACACACACACACACACACACACACACATTAAAAGGGTATTCTGGAGCATGCTTATTGTGT AATGATTATACATCCTTGCAAGTTTCAGATGTTATTTTTTATTATAGAGTACGGCTGCTCTTGAAAGATCACTACGACAG AAAGTTGGATGGCAGAAACTCATAAAAAGGGGAATGCATACACTGAAGAAGCCACAATACCAGGTCTTAATTCTTTTATT AAAAAATTTCAATTGCATTGCAGTATTGCACCAATAAATGATTAGGCTTGATGGTTTTGTTTATATTTCAGCTGTGTTAT GTTGATCCTGGAATTGCTGGAGAGGAGGAGATAGAAAAACTCAAGACAATTGACAGTGTCTTCCTTGAAATTTAGACGAC CATATAAAGCTCTTTGCCACATCCAGGAACTGTCTTTATCTCATGTAATTAAAAAAAAAATCTTTGGCATTTATTCTAAC TATAATTTCATTACATCAGAGAAGAAATTTAAGAGTGCAGATTCTTTTCACAACTTCAAATACCAGATCTGTATAACACT GTCTTCTATTCAACCCATGAGCTTTGTACAAAGCTCTGCATCTTGATTAACTTTGAATAGAGTCCTGCATCTGATGCTAG TAGGGTTGAGTGGGATCCCGTCTCTACAATTTTACCCTTATCCATGACGACTATGGTATCCGAGTTTATCACCGTGGATA ATCTATGAGCTACTGTGATCTGGGTGATTCTTGAGCTCAAGCCACTCCCTTCCTTCAGATTCATTGCTTTTAAAGCATTC ACTATAGTTCTTTCAGACTCAGCATCAAGAGCACTTGTTGCTTCATCAAAGAGTAATATTGCAGGCCTCTTTAGTAAGGT TCTGGCAATGGCTATTCTTTGTTTTTGTCCTCCTGAAAGCTGGCAGCCTTTCTCTCCAACAACAGTGTTATATCCGTTTG GTAGATTACTTACAAATTCATGTATGTTTGCTTCTCTGGCAACCTCCACTATTTCACTTTCAGAAGCCGCATTATTTCCA TAGCAAATATTTTCTCTAATTGAGCAGTTGAAAAGCAATGGCTCTTGTTGTACCAGCCCTATTTGTGTCCTTAACCACCT TAGATTATATTCCTGTATGTCTTTCCCATCAATTAATACCTTTCCCATTCCTGGATTGTAAAATCTTAATAGAAGGGCCA AAACAGAAGATTTTCCTGCACCGCTTGGTCCTACAAAAGCTACCTTCGATCCAGCTTCAATTTGTAAACTGAAATTGTCA AGAACAGTGATTGAAGGTCTTGATGGGTAGTTGAATTGTACGTTTTCAAATTCAACACTTCCCTGGATTCTATCAGGTTG GGAATCATCTGGTGTATCTGGTTCAATTTCAGTTTTACGGTCAAGGGTCTTGAATGCTGGAGTTAGTATATTGATAGCAG AGACAACAGTTGGGATCAGTGTGTACAATTCTGTGATAGAAGGAACTGTGAGAGAAAAAATTTGGTATGATCTTATTCCA TTTTCGAAGGTGGCTTGACGTCTATCAACCAGAACTGTTGTGTACCACAAAGCAACAGCATGTGCAATGTTCCACAAGCA AAGGGAGAAACCTTGAATGATACCATACTTGATACTCTCATTCCTGTACTTTTTCTTTGGAATTTCCAGAAATGTTTTGG CTTTCTTCAGTACTTGCTCTTCATGACAAAATGATGCAATAGTCCTTATGTTGGTTGCAGACTCCGATGTAAGTGCAACA AGGTCAGAATGTGCTGCAGAGTAGTCACCGGAGAATCCTTTGGCTGACTTGCCTTGAATGAGACCACCTATGAAGTGGCA GGGCATAACAGCCCAAGCTACCAAACCCATTCTCCAGTTGACTCTCATGCTGACAATTGTTGCTATCAGTATGGAGGAAA TGCATTGCACAATCACGGACATGCGATCAGCAATTATGACTTTGACCATGGAAGTATCACTGATAATGCGTGAAGTTAGA GAACCAACAGTGTTCTCAGGTTTGTCAAACCAGCCTACTTCGTTACGGAGTACACCTGTAATAAGTTGAAAGGATAATTG ACTTGTATTTTTTAAATCATACAGAAATCTTTATGTACATGATGAATTTTTGTAGGCTATTTAGCTTATGCTTCAATGTT TGTTTGTTTTTTCAGGAAAGAGAAATTAGGTGAATGTGCTGAAATTCTTGTATGGAAATATCTAATACCTGAATACAATG CACGTCTGACATTTGCCATAGCCTTTTCTCCAATAACTCCAAAGAAATAATGCTGGAAGGTGTGGCTAAATAAGGAAAGC AACCCTATTCCAGAGAAGATGGCTGAATAAAATCCAACTTTCCGTTTTGCATCTGGATGGAAATATGCAACTCCAATGGT GATGATGTAGAATCCAAAAAATGGCTTTGAGATGCCAGAGAAAGCTGCTGCAAACGATCCAAGTGAAATCTTCACCAGCT CCCTCTTTTTTAAACCAAACCAAATTCTGAAAAATATGCTCCTTTCCCTTGTGCTCGTATTGCTTTGTTCCTTCATTGCA GACTGCTCTGAGAGATTTCTTTGGACCTCTCTCTGTGTGTCTGGTAGTGGTCTAGTTTCATCAGGAATATCTACTTGGCG GGCACTTTTGTTTGTGGAAATTGTAGTCCTATTCATTGAACGTTTAAAGTTGGTTAGTGTTCTTCCTCTACACCGTTTGG TTTGCAATATTCTTACAAAAAAACAACATAAAGTGACTTATTACCCGGATTCCGGAACTGGTTCAAGGTTCTGCATCCTG AATAAGGTGCTATAAAATCTGCTTGTATTTAACAAAGTGTGGTGTGTTCCTGTTTCTACAACTTGTCCATTCTCCACTAC AGCAATCACATCTGCATTTACAACCGTGGAGAGCCTGTGTGCAATCAAGATGACAGTCCTTCCATGCATAGCTGTCTCAA GTGCTTCTTGGACCAGCTTTTCTGACTCCGTATCAAGGGCACTAGTAGCCTCATCAAGAAGAAGGATAGGAGGATTTTTC AGAATGGCTCTTGCTATTGCAATTCTCTGTTTCTGACCCCCTGATAATTGGACACCCCTTTGTCCTACCTGGGTAAGCAA GTTTGAACATCAGTTCACACTATCTTTTGTTAACATGACTAGAATACATAAGGCACATTTTACGGTGATTCTCTTGCAAA GTTTTGTGTATAAACTGGATATTTAAATCTTGGCCAATCGATTTTTGCTTAAGAACAAAATATTGTACAGAAGCCTCCTC AATTCTTAGACAACTGCTAAAATTAAGATTTCAGAGTTTCATTTGCCTGAAACCGAAAATGGAAAGGAATTCTGATTCGA ATAATGGAGGCAACATTGATATTTTCTCTTTTTACTGGTCTTATTTTGTTTTATATCTCTCTGTCACTTCCTTATCTTCT TCCGTTCTTATATCTAGTTACATACTTACATGGCATTAAATAATAAAAGGGTCAGAATATGATTAGGCAACATTAAGACA AAAATAAAAACCATACAAGACACAATCAAGCTGAAAAAAATTAGCTCACCTCTGTTAGGTACTGATTAGGCAACTGTGAT ATGAAATTGTGTGCATTTGACATAACTGCTGCTTTCTGTATCTCTTCGTCATCTGCATCCATTTTTCCTACTTTCAAGTT ATCTTTGATGGTGCCTGTGAAGAGTGATGGTTCTTGGGAAACAGTCCCTATATTTCTTCGCAGGAACTTGAGATCAAGAT CCTTGATATTGTTACGATCAATAAAAATATCCCCTGGAATATATTAAACACTGTCAAGGTAGGGGTAGTTCTACCGATGG AAATTTTTTCCATT
CDS sequence (LotjaGi1g1v0302900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCAGATTCATGGACTAGTTGCCCTTTCTGCGATTCAACAGTCCCCTCATCCCAAATCAATCGGCACGCCAATGC TCACTTTGAAGATGATCCTGAGCTACCCCAACATATTCATTTTCCCCCTAATTCCCACCTTCAATCATCTCTTCCGAGTG AACAAACAGACAATGACTTGCAGTGCGGAGCAAATTCTGGAGAGTGTGGTGGTGAAACTAGTAGAGATAGCGGGGAATGC AAAATGGATGATAAGTTATCTTGCTTGATTGGTTTACAGGCGAGGAGTGAATTTTGCAAAGTTGAAGGGGGTTTGATGGC TTTGTTAAGAGATTGTTTGGAGTGTGAAGCTGAAAATTCGAGAAGCGTTTTATCTGGGTATGTTGATCATTTCCAGAGTC TTCAGTCTGAGGATTCTGGTTGGGGTTGTGGATGGCGTAACATTCAAATGCTTAGCTCTCACTTGCTAGTGCAAAGGCCA GAAGCAAGAGAAGCTTTGTTTGGGGGTTCGGGATTTGTTACGGATATCCCTTCGCTCCAGAGATGGCTTGAGATTGCTTG GGAGAAGGGTTTTGATGCGCCTGGATCGGCTCAATTTGATCATGTTGTTTATGGTTCAAAAAAATGGATAGGAACTACTG AGTGCGCAGCTCTTTTGCGATCCTTTGGTCTTCGAGCGAGAGTAGTGGATTTTGGTCCCAAGGAATCCCAATCTGCCTCA GGTTCAAGTGTTGATAGCACTATGAATACAGCAAATACTAGTAAGATGGTAGAAAGTAAAGATAAAAAAGGTGAGGCTTA TCAAGTTCTCATGGATTTTGTGTGGAATTACTTTTCTGATGAAAGCTCAATCCAATTTGGTCAACAGTGTGTTGTGGTCA GTGAAAAAATGCCCTTATACTTTCAACATGCTGGTCACTCAAGAACAATAGTTGGAATTCATGTCAAACATCAAGAGACT GGAATTCTACAATATAATCTCCTTGTTCTGGACCCTGCTCATATGTTATTTTTTATTATAGAGTACGGCTGCTCTTGA
Protein sequence (LotjaGi1g1v0302900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDADSWTSCPFCDSTVPSSQINRHANAHFEDDPELPQHIHFPPNSHLQSSLPSEQTDNDLQCGANSGECGGETSRDSGEC KMDDKLSCLIGLQARSEFCKVEGGLMALLRDCLECEAENSRSVLSGYVDHFQSLQSEDSGWGCGWRNIQMLSSHLLVQRP EAREALFGGSGFVTDIPSLQRWLEIAWEKGFDAPGSAQFDHVVYGSKKWIGTTECAALLRSFGLRARVVDFGPKESQSAS GSSVDSTMNTANTSKMVESKDKKGEAYQVLMDFVWNYFSDESSIQFGQQCVVVSEKMPLYFQHAGHSRTIVGIHVKHQET GILQYNLLVLDPAHMLFFIIEYGCS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 246 | 246 | 3.2E-142 | – | |
PANTHER | 1 | 246 | 246 | 3.2E-142 | – | |
MobiDBLite | 33 | 65 | 33 | - | – | |
MobiDBLite | 42 | 65 | 24 | - | – | |
Gene3D | 109 | 281 | 173 | 3.5E-9 | – | |
Pfam | 120 | 334 | 215 | 6.5E-57 | ||
PANTHER | 240 | 335 | 96 | 3.2E-142 | – | |
PANTHER | 240 | 335 | 96 | 3.2E-142 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0302900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…