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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0324000 |
| Transcript ID | LotjaGi1g1v0324000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-galactosidase; TAIR: AT5G63800.1 Glycosyl hydrolase family 35 protein; Swiss-Prot: sp|Q9FFN4|BGAL6_ARATH Beta-galactosidase 6; TrEMBL-Plants: tr|I1KBP5|I1KBP5_SOYBN Beta-galactosidase; Found in the gene: LotjaGi1g1v0324000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:77579038..77586401) extracted from Lotus japonicus Gifu genome v1.2.
GTTTTGCCTTTATTTCTTCCTTTTCTTTATATGGTTTTATTTTCTGCCACGCAATGTGTTGTAATTTTTATATATACTTC TTGAGAGGGTGAGAGAGGAAGATAGATAATTATAAATATAGGCAAAAAGAAGTGGCAGAGTTAGTTAATTAGTACTACTG AAGAAGATGGGAAAATGGGTGGTTCTGCTAGTGCTACTGGTGGTGTTGTTAAAAGTAATTGAAGCTGCAGAGGTGACATA TGATGGAAGATCACTCATCATTGATGGACAAAGAAAACTTCTCTTCTCTGGTTCAATTCATTATCCTCGCAGCACTCCTC AGGTAATTAATTCAACTCTGATCATCAACTCTGATCATGCTCTTTGCTTGCTTCACATTGGATAAAAAATTGTGTTAGAC TGCTAGCTAGCTGTACTTCATTCATGTCTCTATAGTCACTGATTCAATACACTTTCTCATACATTCATGAGAACACAAGA TATCTCAACAATGACATGATCAATAGGTACTTTTTAAACACTTTCTGCATTTTGGGTATCTTTTGGGGATGAACTGAATG TCTTCATCTATAAGTACATACATCTTTCGTGAAAACTTTGATTTCTGATAACAACTTTATGATGAAGCCGCATTTTTGGA TAGTTGTGTCTGCACAATTCATATTAACTAATTGAGTAGTTGATGTCATCAATATAATTAGCAGTTGTAGTTAGAACACA CTTTCTTATCCAGTTCTGAAACTAGCTCATACTTTCTTTATTTCCAAGAGGTAGGTAAAGGTAATGAATTAGGATTAAAT TGTATTTTCATTTAAATTAATATTCAATTTATCATTTCCAAATTTTGAACTTCAAGATAATTAATTACCAATACCAGGTG GTCTAGTACCATTTGATTAAAAAGTCCCCTTTTTCAACTAACCAACCTGTCCTGTACTTTGAACATGCAATATCCCTTGG AAACTACAGAACAGCAAAATCATTTTACAGTTGTAATTCCACCACTATTGAATCACGGGTATGAATGAATGAATATATGT TAGAGGAAGTTATTCCTCAAAACTTTGGGTTAACCAGTAATGTCTAGTACAGCTGATAGATAACTGAACTCCTTAAGCAT CTAATCTAAGAATCGATCCTTCGGTGGAGAGTGATTTGTTGGAGATGTCTATCCTCTAAATGTAATCTCTTAGCCTCGAA TAAATTAATCTTATGGCTATCGGCGGTCGGATATAGTGCAAATGAAAAACTTTTGGGTTAATTTGGCTAGTCAAATTTAA CTTTTATATATCCCTAATTTGATATAGTTAGTTACATTAAGCATCCTTAATTTGGTTGTTAATAAAACAAAGGAACCGTG TGATGATCGAGTAGACTTCACGAATACACATGAATTTGGATTGCTTGAAAGGAAAATATGGATGAAAGAAAGAAAAAGAC AGAGGAATTTTAACAAATATATTAAGACGTTACGTTGTTGCAGATGTGGCCAGGTTTGATAGCGAAAGCAAAACAAGGAG GATTGGACGTTATTCAGACTTATGTGTTTTGGAATCTTCATGAACCCCTGCAACCTGGACAGGTATTTTAATTTATTCCT CATATGCATAATACATACATGAAAATTATAAAATTATACATATTTGGTTTGAAGTAGTTAATTAGTTAACTATATGGTGT AAATACATGCAATGCAATTGCAGTATGATTTCAGTGGAAGATATGACTTGGTGAGATTCATAAGGGAAATTCAAGCTCAA GGACTCTATGTCTGCCTCAGAATTGGACCTTTCATCGAGGCTGAATGGACATACGGGTGGGTATTTTTACTTCTTAATTA GAATTATTTTATGAGTAATAATACACACATGTAAAAGAATAATGTTGCTTTCACACAATTCTCACAACATTCAAACTTGT TTGCAAATAGACCAACACATTATTAATGATAGCCATCAATCAACATCAACTTAGTATATCACGAACTTGGAAAAAATTAA AAGTAATGCATGTTTTTCCGGCTAATAAGCCAAAATTGGCACCTCTAAGTCTAACTAACTGATATTGTTATTGAGCTTGT AGGGGATTCCCATTTTGGTTACATGATGTCCCTGGGATTGTCTACAGATCAGACAATGAACCTTTCAAGGTAATATAATT TGACCAAGCTAGCTAGCTAGGTACTACCATACTTCTATCAATGATACTTATTTACATTCAAAAAGTTAAACAAACACGTA ACAATAACAACCATTTTCATACACTCTATTTTTGCAATTTTTAACTGCTACTATAGTGAGTGTATGAATGCGGTTGATAT TGTTATGCGGTCTAGTACAAGGGTCAATTTATATTTTTCACCCCCTTTTAATTTCATGGATGTATTCCAATGTATAGTTC TACATGCAAAATTTTACAACAAAAATTGTGAACATGATGAAAGCAGAGGGTTTATATGCTTCACAAGGAGGCCCAATCAT ATTGTCACAGGTATATATAATTATTAATTCATCCAATCACTTAGTTTAATTTAATTGAAAATTTCCCATTGTTGATTGCA AATTATATATGTATTGAATTTTATATACAGATTGAGAATGAATATCAAAATGTCCAAAAGGCATTTGGCATAGCAGGAAA ACAATATGTTCAATGGGCTGCAAAAATGGCTGTGGGCCTTCAGACTGGCGTACCATGGGTTATGTGCAAGGAAGATGATG CTCCTGATCCTGTGGTCAGTTTTATTTAGCCCAACCCAACTCACTTGTTTGTAAAGTTGAAAAGAAATTAGGTTATCGAC AAAAAAAAAAATTAGGTTTAACAGCATTTATACTCCCCTAGTTTTTTGGTAATCAAGTCCCCTCTTTTTAAAATTAAACA AATATATCTTTCAAAAAAAAACAAATATAGTCATTTTCTCAATTTTCATCGCATAAGCATTTTACTTTTCAAGTATTTTA GAGTTTGTGATGCATTGGATATACGATGCAATTTTAAAAATTTAAAATAAAAATTAGTGATTATTTTTATAAAAATTAAA GGAATTTATAGGATACGAGATGATGGTTTAAAGAGAGGGAATTTGGTTTTTTTTTGTTCATTTTTCGGTTAAAAATTATT ATGTTAATTAGTGAGTTTTGTGAGAAGAACGTCTATTATGATTTTTTTTAAATCAACTCAATTTATGAACATTTTTCTTA AAAAATAAAATTTGAAAGTTTTAACTAAAATATTAGTGATTGCGGGCTTAATTGTAATAATTAAAAAAGTTAAGATAGTA AATTAAATCAGCTTAAAAATTATTGTACTAAATTAAATTAATTCACCAACAAGGTGGAGAGAGGGCTTTATCATCCCTAC ACCTGCACCTACATGTCCATCGACCGTTACCACTTGGCTATCATTTGAGTATGAATTGAAGTAAACAGAGTAAAAATAAA TAGAGACTAAAAATATAACGTGTTTTTACTTTTTATACAATCTAAACGGTGGAGAGAAAACTTCAACAACCGAGATGTTA GAGCGACATGGATAAACCTTCTTTCCATGAGGATGTTTTTCGCAAGAAGTTGAGCTAGGGATCTTCTTGTGGAGTATTCC TCTATACACACTCTCAAGTCTTACGAACCTAACACGCTTCCACTAGATCAAACCCTAACATAACTAAACCATAGAAGTTC ACATTAGTTTCTTTGTACCATTTTTTATGATATGTTTTTTTATTCATTTAGATCTGCTTTTCTTTCATTTAGATCAATAC ATGCAATGGCATGTACTGTGGAAAAACTTTTACCGGACCAAACTCCCCCAATAAGCCTAGGCTGTGGACGGAGAACTGGA CGTCTTTGTAAGTTCCTCAAATCTCAACATTCAATTGTAAGTGAATCAAATTTTGGTTTATAATACAAATAATAATAGAC CTCAACAAAAAAATATATATATAGATCATTTACACTTACATAATTTTTACCATCTACTTGTAGTTGATCTCACCCCTTTC TACAATTACACTATACTTCTAACACATACTTTCAATCCTGAAAGATTTTAAGCTAAGCATTATGCAACTAGCATTTTTTA TTGATATATTGATGTGTTGGTACCATGTTTCAACTTTCAACAGAATTAACTCTTTGGTTTTCTTTCTTTTTTGCTTGAAG CTATCAAGTGTATGGTGGACTCCCATATATAAGGTCTGCTGAAGACATTGCACTTCATGTCACTCTTTTTATTGCAAAAA ATGGAAGCTATGTCAACTATTATATGGTATTGTCACTTAATTATGCTTTGTTATATTTGTATACCAGATAATCATGTATA GCAATCAAGTTATAGCTATTACACTATAGACATCTAATTAACATTGTTTGCAAAATGAAATAGTATCATGGTGGAACCAA CTTTGGGAGAACAGCCTCAGCTTATTGTATAACAGGATATTATGATCAAGCCCCACTTGATGAATATGGTAATTAAGTGC ACAACATTAATCAGTTTCTTACCTGAATTCCTAAACTTGAAGTTCAATTAATTTTGCAAATTTTCCTTATTAGGTTTGTT CAGGCAACCAAAATGGGGACATCTCAAGGAATTGCATGCTGCAATCAAGTCTAACTCCACAACTATATTGCAAGGAGTGC AGAGTAACTTCTCTTTAGGTCGTCTCCAAGAGGTGATTTAATTGCTCTCACATTTTCTTTCTCCAAGAGGTGATTTACAT TTTCATTAATATTCATAGGTTTTCGTTTCATTTTGATCAGGCTTGTGTTTTTGAAGAAGAAAAAGGAGAATGTGTTGCTT TCCTTATAAACTATGATGGAGGAAACAATGTTTCTGTCCAGTTCCGGAACAAATCATATGAATTGCTCCCCAAGTCCATA AGTATCTTACCAGATTGCCAGAATGTGATTTTCAACACTGCAAATGTAAGTTATAACTTCATCATTATCTAGAATGTATA GGCCTAATATGGTGATTTTTTGGTTTCATTTAGAGTGCGTTTAAGTAGACAGTTTAATTAAGTGCTTATTCATAAACAGC TTATGAAAATAAACCCAAAATAGCTTGTAGACAGGTCATAAGCTTGCTGAAACACTTGTGCATGTGCTTTTGCTGTAAGA TAAGCTCAAATAAGCTTTTTTCAAACGGATTCTTCGTCTTTTTAATTATACTTGTGCATATAGGTTACTACAACAAGCAA CAGAAGGATCATAAGTCCTAGACAAAACTTCAGCTCAGTGGATGATTGGGAGCAATTCCAAGATGTGATTCCAAACTTTG ATGACACCTCACTAAAATCAAATTCATTACTCGAGCAAATGAACACAACAAAAGACAAATCAGATTACCTTTGGTATACT CTCAGGTTAGTTTCATAGTTTCACTTCTGGAAAAAAAAAATATCTGTCAAATGTTCAAGTCATTCCTTAGTATCTATTTC ATTGAACATCACATTATTCATAAACTTTGAACTCATAACTGAAGTGATTACTTTTATGAACAGGTTTGAATATAATCTAT CTTGCAGTGAGCCAACACTTAATGTTCGCTCTGCTGCTCATGTTGCCCATGCTTTTGTGAACAACACATACATAGGTACA TAAATGCACACACTGACACACACAATCCAAAGTATGAAAATTGCAAAAGAAGTTCGCCTAAGTGATTAATTTATTGATTT ATTCTAATTAAATCTAGGAGCTGTACATGGAAATCATGATGTAAAGAATTTCACCTTAGAGTTCCCGGTTACACTAAATG AAGGGGCAAACAACCTTTCTATACTCAGCGTCATGGTTGGACTTGCGGTATGTTTTGAAGGGGTTTGAATTCCCTGCAAT TAGGGGAACCCGCATTCACGCATTCAAACATTTTATGAATCGTCCGATGAAGTTCAGAATTCAGATGACTTAAAATGTTT GACAGCGTGAATGTGAGATTTTCTTGACTAGGGAATCCAAATTCATTTTGAAAGAGTTCATGATAATACATATTTTCCTT TGTCATTGTAATATATAAGTCTAACTATTGTCTAAGATTGTGTTTACTAAAAGGATTCAGGGGCATATCTTGAAAGGAGA TTTGCTGGTTTAATCAGTGTGGGACTTCAGTGCAGTGAGAAGGAGTCTCTTCATTTGACCAAGTCTACATGGGGATATCA GGTTTTCTCTTAAGTTTTACATTTTATTATACAAGTCACTGGTGCAAGTGTGCCAAAAAAAAATTCATTCATGATATAGG TTGGATTACTAGGGGAGCAACTAGAAGCATATAATGGACAAAATAGCAGTGATGTTGAATGGACTCAACTGGGGAATATT ATGGATCAGACTCTCATTTGGTACAAGGTAAAAAAATGATGCAGTATGTTATGACTGTGGTCCTGATTGCACTATTTTAC ATTTTCTGAAGTACAATAATAAATAATTAGCATAAGAGTTTAAGTAATTAAAAGAAGATAGCAAAGAAATTGTTAACTTT TTAGTTACATGCTTGTAATATAAGTATGACTTTGATGATGAACTTTTGAATTGGTAGACTACATTTGACACACCTGAGGG GGTTGATCCTGTTGCATTGGACCTTAGCTCAATGGGAAAAGGCGAGGCTTGGGTAAATGGACAAAGCATTGGTCGCTATT GGATTTTGTTTCATGATTCCAAAGGCAAACCTTCACAATCACTGTAAGTTAATCGACTACAAACCATTACATTTTTTGTT ATTATAAACCCCCGTAATCACACTGCCGACATTCAATCGACATGTGAGGTTTCTGACAGTCTAAAACGGCCGATAATGTG CATAGTTACAGCAAAAACACCTGCTGGAAATTCAAATCCAGAATGCATTTCTAAAACACTGCTAGAAAAAGTGTATGTCG ATTGAATTTCGCGACCGAAATATATTCTAGCTCATATTGTAGAGATAAAAAAAGGGAGGAAAAGGAAGAAAACAGATGAG AAAGAGGGTCTAACTAGAATCACGGTGTTGAGATACTAATTAATGCTATGTGTTATGGTTCTGCAGATATCATGTGCCTC GGTCTTTCCTTAAAGACAAAGGAAACAACACTTTGGTTTTGGTGGAGGAAGGTGGTGGGAACCCTCTTCATATCTCAGTG AACACTGTTTCAGTCACAGATTTACATGAAAACTCTTCTAAATTATCATTCCCTTCCTCTGCTTAGTATTGTTAATTATA AAGAAAATATACATGTAATCACACACATACAGAACCTGTTTCCTTACAGGGCTAGAAAATTGAAACATTTCTAGCTTGTA CACATGATACAAATTTGATTATTACAAAAATATTTCTTGAAAAAATATCTGCAGTGTTAGAAATACAATGTTCTTGATAT GGCA
CDS sequence (LotjaGi1g1v0324000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAATGGGTGGTTCTGCTAGTGCTACTGGTGGTGTTGTTAAAAGTAATTGAAGCTGCAGAGGTGACATATGATGG AAGATCACTCATCATTGATGGACAAAGAAAACTTCTCTTCTCTGGTTCAATTCATTATCCTCGCAGCACTCCTCAGATGT GGCCAGGTTTGATAGCGAAAGCAAAACAAGGAGGATTGGACGTTATTCAGACTTATGTGTTTTGGAATCTTCATGAACCC CTGCAACCTGGACAGTATGATTTCAGTGGAAGATATGACTTGGTGAGATTCATAAGGGAAATTCAAGCTCAAGGACTCTA TGTCTGCCTCAGAATTGGACCTTTCATCGAGGCTGAATGGACATACGGGGGATTCCCATTTTGGTTACATGATGTCCCTG GGATTGTCTACAGATCAGACAATGAACCTTTCAAGTTCTACATGCAAAATTTTACAACAAAAATTGTGAACATGATGAAA GCAGAGGGTTTATATGCTTCACAAGGAGGCCCAATCATATTGTCACAGATTGAGAATGAATATCAAAATGTCCAAAAGGC ATTTGGCATAGCAGGAAAACAATATGTTCAATGGGCTGCAAAAATGGCTGTGGGCCTTCAGACTGGCGTACCATGGGTTA TGTGCAAGGAAGATGATGCTCCTGATCCTGTGATCAATACATGCAATGGCATGTACTGTGGAAAAACTTTTACCGGACCA AACTCCCCCAATAAGCCTAGGCTGTGGACGGAGAACTGGACGTCTTTCTATCAAGTGTATGGTGGACTCCCATATATAAG GTCTGCTGAAGACATTGCACTTCATGTCACTCTTTTTATTGCAAAAAATGGAAGCTATGTCAACTATTATATGTATCATG GTGGAACCAACTTTGGGAGAACAGCCTCAGCTTATTGTATAACAGGATATTATGATCAAGCCCCACTTGATGAATATGGT TTGTTCAGGCAACCAAAATGGGGACATCTCAAGGAATTGCATGCTGCAATCAAGTCTAACTCCACAACTATATTGCAAGG AGTGCAGAGTAACTTCTCTTTAGGTCGTCTCCAAGAGGCTTGTGTTTTTGAAGAAGAAAAAGGAGAATGTGTTGCTTTCC TTATAAACTATGATGGAGGAAACAATGTTTCTGTCCAGTTCCGGAACAAATCATATGAATTGCTCCCCAAGTCCATAAGT ATCTTACCAGATTGCCAGAATGTGATTTTCAACACTGCAAATGTTACTACAACAAGCAACAGAAGGATCATAAGTCCTAG ACAAAACTTCAGCTCAGTGGATGATTGGGAGCAATTCCAAGATGTGATTCCAAACTTTGATGACACCTCACTAAAATCAA ATTCATTACTCGAGCAAATGAACACAACAAAAGACAAATCAGATTACCTTTGGTATACTCTCAGGTTTGAATATAATCTA TCTTGCAGTGAGCCAACACTTAATGTTCGCTCTGCTGCTCATGTTGCCCATGCTTTTGTGAACAACACATACATAGGTAC ATAA
Protein sequence (LotjaGi1g1v0324000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKWVVLLVLLVVLLKVIEAAEVTYDGRSLIIDGQRKLLFSGSIHYPRSTPQMWPGLIAKAKQGGLDVIQTYVFWNLHEP LQPGQYDFSGRYDLVRFIREIQAQGLYVCLRIGPFIEAEWTYGGFPFWLHDVPGIVYRSDNEPFKFYMQNFTTKIVNMMK AEGLYASQGGPIILSQIENEYQNVQKAFGIAGKQYVQWAAKMAVGLQTGVPWVMCKEDDAPDPVINTCNGMYCGKTFTGP NSPNKPRLWTENWTSFYQVYGGLPYIRSAEDIALHVTLFIAKNGSYVNYYMYHGGTNFGRTASAYCITGYYDQAPLDEYG LFRQPKWGHLKELHAAIKSNSTTILQGVQSNFSLGRLQEACVFEEEKGECVAFLINYDGGNNVSVQFRNKSYELLPKSIS ILPDCQNVIFNTANVTTTSNRRIISPRQNFSSVDDWEQFQDVIPNFDDTSLKSNSLLEQMNTTKDKSDYLWYTLRFEYNL SCSEPTLNVRSAAHVAHAFVNNTYIGT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| PANTHER | 8 | 506 | 499 | 9.4E-299 | – | |
| PANTHER | 8 | 506 | 499 | 9.4E-299 | ||
| Phobius | 16 | 20 | 5 | - | – | |
| Gene3D | 20 | 341 | 322 | 3.9E-101 | – | |
| Phobius | 21 | 507 | 487 | - | – | |
| SUPERFAMILY | 22 | 338 | 317 | 7.8E-99 | ||
| Pfam | 29 | 336 | 308 | 3.6E-110 | ||
| PRINTS | 33 | 50 | 18 | 1.2E-52 | ||
| PRINTS | 54 | 72 | 19 | 1.2E-52 | ||
| PRINTS | 110 | 129 | 20 | 1.2E-52 | ||
| PRINTS | 167 | 182 | 16 | 1.2E-52 | ||
| ProSitePatterns | 169 | 181 | 13 | - | ||
| PRINTS | 248 | 263 | 16 | 1.2E-52 | ||
| PRINTS | 285 | 300 | 16 | 1.2E-52 | ||
| PRINTS | 304 | 320 | 17 | 1.2E-52 | ||
| Pfam | 345 | 415 | 71 | 1.2E-26 | ||
| SUPERFAMILY | 399 | 507 | 109 | 6.23E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. |
Expression pattern of LotjaGi1g1v0324000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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