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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0327000 |
| Transcript ID | LotjaGi1g1v0327000.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | magnesium transporter NIPA (DUF803); TAIR: AT4G38730.1 magnesium transporter, putative (DUF803); Swiss-Prot: sp|Q8GYS1|NIPA7_ARATH Probable magnesium transporter NIPA7; TrEMBL-Plants: tr|I1KBR6|I1KBR6_SOYBN Probable magnesium transporter; Found in the gene: LotjaGi1g1v0327000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:78082771..78086233) extracted from Lotus japonicus Gifu genome v1.2.
GCGAATGCAAACATTTATTCATCGCAGTTACAGATAGTGAATGTGAATGTGATGTACTCAAGCAATTTGATCGGGTTCGT GTTAGCTCTTGTCTCCGGCGCTTTCATCGGCTCCAGCTTCATCATCAAGAAAAAGGGTCTCCAACGCGCCGCCACCCTCA GCGGCTCTCGCGCCAGTGGTGGTGGCTATGGTTATCTCCTTCAACCTCTTTGGTGGCTTGGAATGGTTACTAGTAAGAAC TAAGAACCTACCCATCTACCTAACTTTCTTTATCTTTCATTCTTTCAGCATTTTCCCATTTTTGGTCTCTGATTTTGACT CTGGTTTCCCTTTTTCACAGTGATTGTTGGCGAGATTGCGAATTTTGTTGCCTACATTTATGCCCCTGCGGTGCTTGTTA CTCCACTTGGTGCTTTGAGTATTATTGTTAGGTGAAAATGTTCTTCTTTTTTGGGCCCCCAATTTCAATTTTGCTTTTTG GATTTTAAAAGTTTGATTTTTGAGCTGATTCTGCTTCTGGGTATGTATGGCTAGTGCTGTCCTGGCACATTTCATGTTGG GGGAGAAGCTGCAGAAGATGGGTATGCTAGGGTGTCTTCTCTGTATAGTGGGGTCCACTATGATTGTGCTCCATGCGCCT CAGGAAAAGTCTCTCAGTTCTGTGCTGGAAATATGGCAATTGGCTGTTCAACCAGGTAAGCTTGTTGTTGTATGTATCAT TGTTGATTTAGGCTGTGTTTGGATTCAAACTGAGATCAACTTGAAAGCACATTTATGATTTAACCCAATGAAAGTAAATA GTTCCTTTCACTCTTGCTGCATTGGAATTAATGTGTTTTCGTTCAAGTTATCTGGTAAAACTATGGTTTGGTTTTCGGTT CACATGTGTTGCGAGACAATTTCTACAGAAAAACACGAATTCTAAGGGAGCTGAAAGGAACTCACTGTTTCCGTTGGCTT GGAAGTGCTTTCTAAATCTCAACTGAAATCTAAATACACCCTTATTTGTTTATTTCTGCTGATGTTTCTGCTTTCTGTTT TGGTATCCAGCATTTCTTATGTACACAGCTTCAGCAATGGCTGTAACATTCTTTCTGATTTTGTATTGTGCTCCCCGCTA TGGCCAGACTAATATTTTTGTGTATATTGGAATATGCTCCATAATTGGATCCTTAACTGTAAGTGACTCTTTCCTTCCCG GTTCACCACAACAGATGACAAAGTTCAACGCCACAGGTTACACTTCTAATAAGATATCTTGTTTCTCAGGTCATGAGTGT AAAAGCAATTGGCATTGCTATAAAACTTACATTGGATGGTGCAAACCAGTTTTTCTACATTCCGACATGGATTTTCACAA CGGTTGCTATTTCCTGCATCATTACTCAATTAAATTACCTTAATATGGTCAGTAACACTCTTGACTTTTTATGTAAAGTT GCTTTTTGGTATATGACATAAAAGAAATTAGAGCCTTAATTTATCTTCCCTTTAGAAGAATAATATAACCTTTACAATGC TGGCTTTCAATTATGTTTGTCATCTGCTTGTATTTAGTATGAAGAAGCATTTTTGTTTGCTAGAGGTGATCATACATTTG TATTTTTCTAGGCTTCTTGATCCCTTTCTTTTTCTTTGGTCGCGCGCCTATTACTAACATTTGTCTGTGGAAGTTTTCAT CCCATATCAATTAAAGTAACTTTCAGTAGTCTTTGAGATAATCTATAAGTTAAATATGTAAGTTTCTAGTCCAAATAACA TCCATGTAATGCTTGACCTGGACCCTCTCCCCCCCCCCCCCCCTAAACTGATAATCTTGAAGTCCTGACTCCTGAATTTT ATTTACAAAGATCGTTGATTACTTGCCTTTCAGTTGTCGTCTCATTGTTTGCTAATTAGTTGGTCTTCAATCTGGGCTTT TATGGTGATCAAATTTGCATGATTGCAGGCTCTGGATATTTTCAACACAGCAGTTGTTTCTCCTATCTATTATGCCTTGT TCACATCTTTTACAATATTAGCTAGCGCAATCATGTTTAAGGTTGGTATTTTACTGAAACAAATGAGAAACGCTACTAAG GAAGCACCTCATGCATCAAGTGCTCAATTATCTGTTGTAATCCCACCTCCTCTACCTTTCTTATTTAGGATTATTCTGGT CAAAGTATAAGCAATATTGCATCAGAGCTTTGTGGCTTCATCACTGTTTTATCTGGAACAGCCGTACTGCACAGTACAAG AGAACCAGATCCTCCAGACAGTACAGGTAATTCCTCATGCACTTAGGTGAGGGTAGCTTTGATGATATAAGGACTCCTCT ATGTGCCCCTGTGTTAAGCTGCAATCAAAAACTTTATTAGTATCGGGTAACTTGAACTGTTCTACTGTCTGATACTATAA TTACACCCAAGGCTAAAACTCAATACAAACTTTAGATAATATGAAAAAGATGCTCATTACTTTAGATATATTGTATTGAA ATTCAAATTTTTATTTGAATAAGTGGGACAACAATAATCGAACTCTAAAACTACTTAGGCATAGAGGCTTTGATATCATG TCATGAATTAACTATTGCAGAAGTTTAAACTTTTGGGTGAAGACACGGGAATGGTTTTATATTTTATTTCTAATTACTAA TTTCTAAAACTGAACCCTGGCGTAACATCTGTTAGCCTCTTTTTCCTGCCAAAACACTTAAAATCAGGACGAACTGCTCC ATCATGAAAGGAGATGCCTAGCCTTTGCAAATTAATTAATTTATTTGTAGTACATATGCATTAAACTAAGGTCTTTCCCT GTATGGGCTGTTTAGCAGAACTGCAGAAATATACTCTACCATTTAAGCGACAACTATCCAGATGCAGATATGGAACCTTC AATGGTTCTTAGCAAGTTTTGAGAAGTTAACTGTTCAATAATAATAGATATATCATTTTCTTCTGATTGATTAAAAATGA AGAAATAGGATAATTGATTTGTAAGCCTCATGCCATAAGATTTTTCCAATTTCACTCTAAGCACTTATGAGACATTTTCC ATAAAGCACTTGGAGCTCCAAATTATAGTTCACATATATGAATATACACCTATGTCATGGCTAATCTGTTCTGGTGGAGA ATTAAGGGACATTCAAAGAGAAAAGTTAAAAAAAAAATGTTTGGCTAGAGGCCTAGAGGGCATATAGTCAACATTCAGGA CAGACTTGGATTTCTTAGCATAATAAGACAGTGCGATTGAAGTTTTTTTGTTATTACTAGTTATGTTTAAGTTGAGAGGC TAATGCTGTTTCCAAAAGTGCAAGAAATTTCCTAATTATTCATCGCATGCAGATCTTTACAGTCCCTTGTCTCCAAAAGT ATCATGGTACATCCAAGGCAATGGCGAAACTTGGAAACAGAAGGAGGAAGATGAACAACCCTTCAGTTTAATCACAGTTA TTCGGCAAGACCATTTCAAGTGA
CDS sequence (LotjaGi1g1v0327000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACTCAAGCAATTTGATCGGGTTCGTGTTAGCTCTTGTCTCCGGCGCTTTCATCGGCTCCAGCTTCATCATCAAGAA AAAGGGTCTCCAACGCGCCGCCACCCTCAGCGGCTCTCGCGCCAGTGGTGGTGGCTATGGTTATCTCCTTCAACCTCTTT GGTGGCTTGGAATGGTTACTATGATTGTTGGCGAGATTGCGAATTTTGTTGCCTACATTTATGCCCCTGCGGTGCTTGTT ACTCCACTTGGTGCTTTGAGTATTATTGTTAGTGCTGTCCTGGCACATTTCATGTTGGGGGAGAAGCTGCAGAAGATGGG TATGCTAGGGTGTCTTCTCTGTATAGTGGGGTCCACTATGATTGTGCTCCATGCGCCTCAGGAAAAGTCTCTCAGTTCTG TGCTGGAAATATGGCAATTGGCTGTTCAACCAGCATTTCTTATGTACACAGCTTCAGCAATGGCTGTAACATTCTTTCTG ATTTTGTATTGTGCTCCCCGCTATGGCCAGACTAATATTTTTGTGTATATTGGAATATGCTCCATAATTGGATCCTTAAC TGTCATGAGTGTAAAAGCAATTGGCATTGCTATAAAACTTACATTGGATGGTGCAAACCAGTTTTTCTACATTCCGACAT GGATTTTCACAACGGTTGCTATTTCCTGCATCATTACTCAATTAAATTACCTTAATATGGCTCTGGATATTTTCAACACA GCAGTTGTTTCTCCTATCTATTATGCCTTGTTCACATCTTTTACAATATTAGCTAGCGCAATCATGTTTAAGGATTATTC TGGTCAAAGTATAAGCAATATTGCATCAGAGCTTTGTGGCTTCATCACTGTTTTATCTGGAACAGCCGTACTGCACAGTA CAAGAGAACCAGATCCTCCAGACAGTACAGATCTTTACAGTCCCTTGTCTCCAAAAGTATCATGGTACATCCAAGGCAAT GGCGAAACTTGGAAACAGAAGGAGGAAGATGAACAACCCTTCAGTTTAATCACAGTTATTCGGCAAGACCATTTCAAGTG A
Protein sequence (LotjaGi1g1v0327000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYSSNLIGFVLALVSGAFIGSSFIIKKKGLQRAATLSGSRASGGGYGYLLQPLWWLGMVTMIVGEIANFVAYIYAPAVLV TPLGALSIIVSAVLAHFMLGEKLQKMGMLGCLLCIVGSTMIVLHAPQEKSLSSVLEIWQLAVQPAFLMYTASAMAVTFFL ILYCAPRYGQTNIFVYIGICSIIGSLTVMSVKAIGIAIKLTLDGANQFFYIPTWIFTTVAISCIITQLNYLNMALDIFNT AVVSPIYYALFTSFTILASAIMFKDYSGQSISNIASELCGFITVLSGTAVLHSTREPDPPDSTDLYSPLSPKVSWYIQGN GETWKQKEEDEQPFSLITVIRQDHFK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 336 | 336 | 1.2E-214 | – | |
| PANTHER | 1 | 336 | 336 | 1.2E-214 | ||
| Phobius | 1 | 5 | 5 | - | – | |
| Pfam | 5 | 296 | 292 | 1.2E-124 | ||
| Phobius | 6 | 25 | 20 | - | – | |
| TMHMM | 6 | 25 | 20 | - | – | |
| Phobius | 26 | 45 | 20 | - | – | |
| TMHMM | 45 | 67 | 23 | - | – | |
| Phobius | 46 | 67 | 22 | - | – | |
| SUPERFAMILY | 51 | 125 | 75 | 2.48E-9 | – | |
| Phobius | 68 | 72 | 5 | - | – | |
| Phobius | 73 | 99 | 27 | - | – | |
| TMHMM | 77 | 99 | 23 | - | – | |
| Phobius | 100 | 105 | 6 | - | – | |
| Phobius | 106 | 126 | 21 | - | – | |
| TMHMM | 106 | 125 | 20 | - | – | |
| Phobius | 127 | 145 | 19 | - | – | |
| TMHMM | 140 | 162 | 23 | - | – | |
| Phobius | 146 | 166 | 21 | - | – | |
| Phobius | 167 | 172 | 6 | - | – | |
| Phobius | 173 | 198 | 26 | - | – | |
| TMHMM | 174 | 196 | 23 | - | – | |
| Phobius | 199 | 209 | 11 | - | – | |
| Phobius | 210 | 230 | 21 | - | – | |
| TMHMM | 211 | 233 | 23 | - | – | |
| Phobius | 231 | 241 | 11 | - | – | |
| TMHMM | 240 | 262 | 23 | - | – | |
| Phobius | 242 | 263 | 22 | - | – | |
| Phobius | 264 | 346 | 83 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion transmembrane transporter activity | Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other. | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi1g1v0327000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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