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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0368300 |
| Transcript ID | LotjaGi1g1v0368300.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | magnesium transporter NIPA (DUF803); TAIR: AT5G11960.1 magnesium transporter, putative (DUF803); Swiss-Prot: sp|Q8RWH8|NIPA9_ARATH Probable magnesium transporter NIPA9; TrEMBL-Plants: tr|I1JTY2|I1JTY2_SOYBN Probable magnesium transporter; Found in the gene: LotjaGi1g1v0368300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:84645179..84650258) extracted from Lotus japonicus Gifu genome v1.2.
TATGGAAATCGAATCCTAGAAGAGAGAGAGAGAGAGAGAGAGAGGAGGGGGAAGAAGAAGAAGAAGCAGCAGAAGAAGAA GCAAGGGATCGGAGAGAATGTGGGAATCAATTGTTTTGACGGTTGTTGCGACTGCCGGAAACAACATCGGCAAGATCCTT CAGAAGAAAGGCACAGTCATTCTTCCCCCTTTCTCTTTCAAGTTCAAGGCATGTTTCTCATCATTTTCAATTTTCCCCTT TCTCTTTTCCGCTTTTTTCTTTCTTTCTAATGACCCTTTTATGCCTATGATCTGATTCCACCTTCAAAATCTCTCCTTTT AATCATTTCCTATGCTGTCAATTTGCCTTATGGTTGGTGAAATTGGGTTCATATGTATGAGGGTGGGATTTTGGGTTGTG AAAAATTGGGTAAATTAAGTGGGCAGGATGTGACTGTTTGATTAAGTATTAATATTGCTCTTTTGGATTATTTTTCCATC TTGTTTGCAGGTATTAAGGTCATATGCTATGAACAAAACATGGTTGACAGGTTTTGTAATGGATATATTTGGTGCATTAT TGATGTTAAGGGCATTAGCTCTGGCTCCTGTAAGTGCTCTGGCCTTGCCTAAACAATAGTTAGAATTTTAAGTGACATGT CTCTAGTCTCTACCATTAGCATGTCTTTTCCCTATATTATTGAGTATTTACATTGGTAATGTACTTGTTTTTCTCAAATA GGTATCTGTCATCCAACCAGTTTCTGGTTGTGGACTGGCAATTCTTTCAATCTTCTCTCACTTTTATCTCAAGGAAGTCA TGAATGCTGTTGATTGGGTGGGCATAACTTTGGCAGGTTTTGGCACAATAGGTAATGTAAGTTTTAGATTTACATAATAT TTGGTTGGAGGGTAATGGAGGGTTTTTTTTTTTTAATTAGCTTGTTTGGTTCAATTTTTAGGAGAGGAGGGGAGGGTTTG GAGGGGACCAAAACCCCTCCTAACTCAATTTTGTGTCCCCTCCAAAAGTGGGCCCCAATGGGAGGGGAAACATTTTATTG GATAAAAATGTCCTTGAGTCCTTCCTACTCATGCTTATTCCTCCCAATTTCCTTCACTTACATTGATGCTGCAATGTGCT ATCTCTCTGTCATTATTGTTTTCTGCGTTCATTCCTTTTTTTTTTTGAACAATCAACTCAGATTTATGGGGAACAATAAT CTAGGTGTTCAAAACGTAGAATATCAGTTAAAATATTAAATGGCATGTCCTCAATATAGTATTCAGAAATGAAGCAAAAA TAAGATTATTGCAGAACAATCCTGGAAACCGCAAAGAAACACGCTGTAGTTCAACTTTCAGGTTTCCCTGCGTGATGGAT ATGCTTTGTGGTACAAATTCCCTTTGCTCTGTAAACCCCCCTTGCAAGTGTAAAAGGTGTAAAATTAACTTAATTATCAA AATCCTCCCCTCCCTTTGTGAACTAAATAAAAAATAAGAGTTATTTCCCCTCCCCTCTCTTGAACCAAACACACCCTTAC AAAGAAAAGTGCATTAAGTTTAACTAAGTAACTAGCAATGGGAGTAACAAAGTTTCTAGGTTTCTATGTGAAAAGTGCTA ACAATATATTCTTTGACACGGTCTTTTCAACAAAATGATATTATCGAGTGAATTTCATATATAAAAAGAGTGTAGATCCC GGATTTTTAATGGGCCTCACATAAAATTTATCCAATAATGTAAAATTTATTTGAAAGAATGTATTAGTGGCTTACTGGCA TGTCTATTTTTATATCTTCAGAATTGAAATATGAATAAAGCGACTGTAGGTGAAACAGTGTACCATTTCATTTTTCTTTG TGCTTTGTGTCTATGCAATGGATTGAGATTTATTGGAGTTTCCCTCATATTATTTGACTGCTAATAAATTTAAATTTGCA GTCAATTACTGGATTCAGCTCACCAAATATGTCATTATATTGATATATGATTTTACATTAATGTGTCTCAATTTGTTATC TGTTCTTTGTTCTTTTATATTCAGGAGTTGGTGCTGGAGGCGAGGAGCAAGAGGCTGCTGCTCTATCTATTTTTCACATA CCATGGCTGGCATTTGCTGTTTTCATCTTGTTTGTAGGTAACTCTATCTTATGCATCAATTTACTTTTATAGTGTGTTTG GAATGCTCTGGCCTATTAATCGCCAACTTTATGTAAAGCCTAGAACATCATTGTGGTCTCTTAGAATGCATTAAATGTGT TATGAAGCATTATGTTTTCTTTTTCATTAACCTGGTGGCCTAATTATGAAATTGTTGGTTTTGACACACTATTTTATTGA CAGGCTTCAACATTCCCTTAAATATTGCTATCTTCCCGACATAGTTACTATTATAATTGTTAGAGTCACTTGTGCAGATC TTGCTTAATGGATGGCTTCGTATACGCAAACGTCAGCGAAAAGAACAAGAGATGGTAATTCGTGTCTTAATACTTACATG TTTATTTTTATGTGGATATGCCAATATAATGAGATACATTTGTCCTTTATTCTTCTTTCATTTCTTGACCTTTTTAAGTG ATGCAGATGGAATATGATGTTGTTGAGGAAATAATTTACGGCTTGGAATCAGGGATTTTGTTTGGGTACTCTTACTTCTC TACTAATTTTATGTATTGTGTTCTTGTATGGACACATTTTACTTCTTTCATTTACCTCAACTCCTTAATATCAGGATGAA GATAACGACAATTAAGTATTTTTTTCATTTATGATATTTTTTGCATGTGTGAATTTTTTTGCATGTGTGAATTTTTTTAG TGAAGGTTTTTGGAGAGAATAAAGCAGCTAGTAGAATAACATGTTATGTAGAGAAGAAATAAAAACAAACAGAGAGCTAG AGGCTAAAAGTTGTAAAAAAAAAAAGCTATATCCTTTGTCTCTGCAAGAACTGGAAGTTCCTTTTAAACAATTATCAGCA CAGTCCCACAGAGGGGTAAAATCTAAGGTTAAACAGATGCCTAAATGTGATCATTCCTCTCCAACTTCTAGTGTTTAGTA TCATCATCTGAAAAAAACTGGCAAATTTGTATTAACTGCAATATTTTCATTAGTTAATTCTAAACTTTAATTTAATTAGA TTTGTCAGTTTCTATTTCACTACTTTGCCACTTTCTTCTGACAACGATCTAAACTTGAAGATCTTATTTACACACAAACA CACACTCCTTGCTCTTAATTGAGTTAATATGTAAATGCAGGATGGCATCTGTTATATCAAAGATGGGATTTCTATTCCTT GAACAAGGGTTCCCCAAGCTGCTGGTTCCTTTGTGCCTCATCATCAGTGTGTGCTCAAGTGGTACAGGTTTTTACTACCA GGTATTCTGAATACCATAACTTGCTACTTTTGTGTGAACTTCTACACCATTTAAACCTAGGGGGCAGTTAAGCCTATGGG TGGTGGGGGAAGGTGTGATTTCCATCAAATATATTCGTCTTAGTTCTTCACTGCCAATTTCAGAGATGCTAACATCTTGC AATCTTCAACATACAGACACGCGGTCTGAAGCATGGGAGGGCTATCGTGGTTTCTACATGTGCAGCCGTGGCATCAATTT TGACTGGTGTACTTGCCGGGATGCTTGCTTTGGGAGAGCGACTCCCTTCAGCCCCGAAAGCTCGATTGGTACTTCTTCTT GGATGGTAATATAATATTTTATAATATTATTTAGTAGTTAGTACATTTGCATCCCTTGCTTTCCTTGATTCCCAACAAAA GCAATGCAGAATTAAGCATTTACTGTTTCTCTTCTATTCTTTGGTACAAGTGTTTATCTGTTTTGGTCAAAGGACTTGAG CAAGAGAATATATAATCTAAGTCCCAAGATATATATCAATTGTATTGTGGTAGAATCCAATCTAGTAATTCTTGTTTCTT AAAACAATATGGGAATCGTCACATTCTTATATGAAAGTTAATCAGAAACATTTTGCTGCAGGTTACTCATTATTTTAGGC GTGATTTTACTTGTTGGTTCAACAAGAGTAGTGAGATTCCTCCGATTAAATTCACAGCGCTTTAAAAGAACCAGTGTTGA TAAGAATCATGGCCCTAGAAGATCTGCGGCATCCCGTATCAGGGAACCAAGTCCAACTGCTGTTATTCAAGCAGCGACCT TAAATCATCTACTGGCATCATCTTCCAAAGAAAAAGCTTGATTTGACTGAGCTGGAAAATACTCCTTCATCCATTCTCAG TATTCAACACCCCCAAAGGAAAGAAAGATAGGAGGAAAGCGTAAACCTCTCTTGCGCGAGTCTTCGCAGTCACATAGGGC TAGTTATCATCAGACAAAACTTGAAGTGATTTCGCTGCTTTACTGTACAAGTTTTCAGTGCACATAGAACTCCGTATCAG ATTTTGATAGCTCTTGGTGATATTGTTACTATAATTTCCTTAGCTCCTAAAATCAGCCTTGTTCATTCCTCTATTGCTTT TTTTTTTGAGGGGGGTCCCCTGGTTTGTGATGCAGTTATTTGACAGCTCTTGCACTATAATGGTCAAGATACAGTGTTCT ACAGATCAAAACTGCTCCCAAGGAATAAGGGAATCAAATTATCTACCCTTTTTATTTGCTCTTAAGTTACTGCTCAAAAG CAAAGCGAATATGAAGATCCAAAAGGCAATGTTGTTCAACATAACAGATCTGATGTGATTTCATATGAAAATCTTTCTAC AATTGATTCTAAAATCATAATTAATTTAGTGAAGAAGTTTCTATGAGCAGTTTCAGGCTCTCAGAATTGATTTTGAAGAA GTTTATCCAAATTTGTGTTTACCACTTTTGTTATGAATATCAGCACATTTTTATGGCACAAAAATTTCACCTTATCGCGA TTTATTTAGCAGATAGAATCCATGCCATTCCCAAGGTCAATAATAGCCTTTCTGTAAGTGGTTAGTGGTCCCAAGAATAC ATGATGAACAGTTGAATACCTCTGCAGTCCCTTCATGGTGGGTCAACTAAAAAGTTAATAGCCTCTCGAGAAGACAGGGA ATAAATTATGACAAGGAAAGAATGGTTGGGAAGAAGGACC
CDS sequence (LotjaGi1g1v0368300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACAAAACATGGTTGACAGGTTTTGTAATGGATATATTTGGTGCATTATTGATGTTAAGGGCATTAGCTCTGGCTCC TGTATCTGTCATCCAACCAGTTTCTGGTTGTGGACTGGCAATTCTTTCAATCTTCTCTCACTTTTATCTCAAGGAAGTCA TGAATGCTGTTGATTGGGTGGGCATAACTTTGGCAGGTTTTGGCACAATAGGAGTTGGTGCTGGAGGCGAGGAGCAAGAG GCTGCTGCTCTATCTATTTTTCACATACCATGGCTGGCATTTGCTGTTTTCATCTTGTTTATCTTGCTTAATGGATGGCT TCGTATACGCAAACGTCAGCGAAAAGAACAAGAGATGATGGAATATGATGTTGTTGAGGAAATAATTTACGGCTTGGAAT CAGGGATTTTGTTTGGGATGGCATCTGTTATATCAAAGATGGGATTTCTATTCCTTGAACAAGGGTTCCCCAAGCTGCTG GTTCCTTTGTGCCTCATCATCAGTGTGTGCTCAAGTGGTACAGGTTTTTACTACCAGACACGCGGTCTGAAGCATGGGAG GGCTATCGTGGTTTCTACATGTGCAGCCGTGGCATCAATTTTGACTGGTGTACTTGCCGGGATGCTTGCTTTGGGAGAGC GACTCCCTTCAGCCCCGAAAGCTCGATTGGTACTTCTTCTTGGATGGTTACTCATTATTTTAGGCGTGATTTTACTTGTT GGTTCAACAAGAGTAGTGAGATTCCTCCGATTAAATTCACAGCGCTTTAAAAGAACCAGTGTTGATAAGAATCATGGCCC TAGAAGATCTGCGGCATCCCGTATCAGGGAACCAAGTCCAACTGCTGTTATTCAAGCAGCGACCTTAAATCATCTACTGG CATCATCTTCCAAAGAAAAAGCTTGA
Protein sequence (LotjaGi1g1v0368300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNKTWLTGFVMDIFGALLMLRALALAPVSVIQPVSGCGLAILSIFSHFYLKEVMNAVDWVGITLAGFGTIGVGAGGEEQE AAALSIFHIPWLAFAVFILFILLNGWLRIRKRQRKEQEMMEYDVVEEIIYGLESGILFGMASVISKMGFLFLEQGFPKLL VPLCLIISVCSSGTGFYYQTRGLKHGRAIVVSTCAAVASILTGVLAGMLALGERLPSAPKARLVLLLGWLLIILGVILLV GSTRVVRFLRLNSQRFKRTSVDKNHGPRRSAASRIREPSPTAVIQAATLNHLLASSSKEKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 301 | 301 | 1.3E-150 | ||
| PANTHER | 1 | 301 | 301 | 1.3E-150 | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Pfam | 3 | 240 | 238 | 1.0E-6 | ||
| SUPERFAMILY | 5 | 76 | 72 | 4.18E-8 | – | |
| TMHMM | 5 | 24 | 20 | - | – | |
| Phobius | 5 | 24 | 20 | - | – | |
| Phobius | 25 | 29 | 5 | - | – | |
| TMHMM | 28 | 50 | 23 | - | – | |
| Phobius | 30 | 50 | 21 | - | – | |
| Phobius | 51 | 56 | 6 | - | – | |
| Phobius | 57 | 76 | 20 | - | – | |
| TMHMM | 57 | 76 | 20 | - | – | |
| Phobius | 77 | 81 | 5 | - | – | |
| Phobius | 82 | 107 | 26 | - | – | |
| TMHMM | 86 | 108 | 23 | - | – | |
| Phobius | 108 | 127 | 20 | - | – | |
| Phobius | 128 | 147 | 20 | - | – | |
| TMHMM | 129 | 151 | 23 | - | – | |
| SUPERFAMILY | 141 | 242 | 102 | 2.75E-5 | – | |
| Phobius | 148 | 158 | 11 | - | – | |
| TMHMM | 155 | 177 | 23 | - | – | |
| Phobius | 159 | 178 | 20 | - | – | |
| Phobius | 179 | 189 | 11 | - | – | |
| TMHMM | 189 | 211 | 23 | - | – | |
| Phobius | 190 | 211 | 22 | - | – | |
| Phobius | 212 | 222 | 11 | - | – | |
| Phobius | 223 | 246 | 24 | - | – | |
| TMHMM | 226 | 248 | 23 | - | – | |
| Phobius | 247 | 301 | 55 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Magnesium ion transmembrane transporter activity | Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other. | ||
| Biological process | Magnesium ion transport | The directed movement of magnesium (Mg) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi1g1v0368300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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