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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0453900 |
| Transcript ID | LotjaGi1g1v0453900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0453900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:95446723..95449308) extracted from Lotus japonicus Gifu genome v1.2.
CCGCTCACAAACTCACGAAGCTAGTCTCTCTCCCCGTCGACTGATCACGGCGGCAAGTGAATACCGCGCATCTCGTCTTC CCTTTGTGTGTGGTTGCTCCGTGCATTCTTTTGTGGTATAAGATTTATTCCTTAGTTTGATTCTGTTATTCTTTCATGTT ATCATTATTTTTATGCCTTAATGTTCTAAAATTTCAACTTTTTTTTTGAAAGAATAATTATTGGAGGATTGAACTCTATA TTACCTGATCATAGAGACTGTATTATCATTTTATGAACTAATTGGATTATGAAAGGTTGATTAGGATTCTTTTTGTATGT TGTGTTAGACTGAAAGAATGGCAAAAAATTATGAGGGATGTGCCATAGGAATCGACCTCGGCACCACCTACTCTTGTGTT GCAGTTTGGCAGGAGGAACAAGGCAGGGTAGAGATCATTCATAATGATCAAGGGAACAGAATTACTCCCTCCTTTGTTGC TTTCACTGATGAGCAGAGGTTGATTGGTGATGCTGCTAAGAATCAGGCTGCTACCAACCCTGAGAACACTGTTTTTGGTA AAATTTTCTTCTTGAATTACTATCCTCCTCTAAATATTTACATTGAGCAAAACAAATGATACATAGTTGAGAATTGTTAT TGTTTATGCAGATGCTAAGAGGTTAATTGGTAGGAAGTATAGTGATCCCATCGTTGAAAATGATATAAGGTTATGGCCAT TCAAGGTTATTGCGGGTGTTGATGACAAACCCATGATTGTTGTTAAGTATAAGGGTCAAGAGAAGCATCTTTCTGCTGAG GAAATATCATCCATGATTCTCACAAAGATGCGGGAGATTGCAGAGGCGTATCTGGATTCACCTGTTAAGAATGCAGTTAT TACAGTGCCTGCTTATTTCAATGACTCTCAGCGCAAAGCCACTGTAGATGCTGGTGTCATTGCTGGTCTCGATGTTAAGC GGATAATCAATGAACCCACCGCGGCTGCAATTGCATATGGCCTTGACAAAAAAATTAATTGTGTGGGAGAGCGAAATATT TTCATCTTTGACCTTGGTGGTGGCACTTTTGATGTGTCTCTCGTTACAATTAAAGAAAAGGTCTTCACAGTTAAAGCCAG TGCTGGAAATTCTCACCTAGGAGGAGAGGACATTGATAACAGAATGGTGAACCACTTTGTGGAGGAGTTTAAAAGGAAGA ACAAATTGGATATTAGTGGTAATGCAAAATCACTTAGAAGGTTGAGAAGCGCATGTGAGAGGGCTAAAAGGGCACTGTCA TCAATGGTTGTAACCACCATCGAGGTAGATGCTTTGTTTCAGGGGATTGATTTCTCTTCCTCAATCGCTCGTGCAAAATT TGAGGAAATCTGCATGGACCTCTTTGAAGAGTGTATGGAAACAGTGGATAGGTGCCTTGTTGATGCTAAGATGGACAAGA TCAGTGTGCATGATGTTGTCCTTGTTGGTGGATCTTCTAGGATACCGAAAGTGCAGGAGTTATTGGAGGAATATTTCAAA GGGAAGAATCTGTGCAAGAGTATCAATCCTGATGAGGCCGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTCATTGAGTGA AGGCATTAAGAATGTTCCTGACGTGGTGCTCTTTGATGTTACCCCGCTGTCTCTTGGTATATATGCAGAACGAGATGTCA TGACCGTGGTGATTCCTAGGAACACTACAATTCCTGTCAAGAAGACAAAAACGTGTTTTACAGCTTTGGAAAATCAACCC AATGTCAAAATTATGGTTTACGAGGGTGAGAGAGCTAGAGCTACTGATAACAATTTGTTGGGTTATTTGTGTCTTTATGG ATTTCCTCCTGGTCCTCCTGGCCACCCATTTGATGTATGCTTTTCTATTGATGAAAATGGTATACTAACTGTTTCTGCTA AGGATATAACTAATGGTAACACGAGGGAGGTTACCATTACCAACAACATAGGAAGACTTTCAACCGGAGAAATTAGAAGA TTAATTCAAGAAGCTGAGTATTACCAAGCTGAAGATCAGAAGTTCCTCAGGAAGGCCAATGCGATGAATGCTTTGAGTAG ATACACTTACACAATGAAAAATGCTATGAAGCATACTAATGTAAGTTCTAAAAATTTACCAATGGATGAGCAGAAAGTTA GAGACGCAATTACAGAAGCTGAAAATTTGCTTGCTGACAACCAACAACTAGAAGCCTATGTGTTCGAGAACTGTTTGAAC AAGGTGAGAAGCATCTTTGAACCAGTTGTAGTTAAAAGGAAGCGTGCAAGAAATGATGAGGTAGTTGCTTTGGATGAATA GTAATAAATTTGGAGAAATTTGCTTAGCTTGACCCATGTTGATGGTTTGCTTTTGGAGGTTCTTTCTTCTTTTTATAGGC TGTAATTGGGGTTTTGGTACCTTTTATGTTTGGGCATGATCAACTCTTTTTCCTTCATTGGTTTTTTCCCACTGGGTTTT TCCTTTGAAGGTTTTAATGATGCTCATCTCTTAGTTTGTTTATCATAAAGGAGAATTTAGCTTTGTCTGAGTTATTGATG GTGGATATATCCTTCAGCTGTTCATG
CDS sequence (LotjaGi1g1v0453900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAAAAAATTATGAGGGATGTGCCATAGGAATCGACCTCGGCACCACCTACTCTTGTGTTGCAGTTTGGCAGGAGGA ACAAGGCAGGGTAGAGATCATTCATAATGATCAAGGGAACAGAATTACTCCCTCCTTTGTTGCTTTCACTGATGAGCAGA GGTTGATTGGTGATGCTGCTAAGAATCAGGCTGCTACCAACCCTGAGAACACTGTTTTTGATGCTAAGAGGTTAATTGGT AGGAAGTATAGTGATCCCATCGTTGAAAATGATATAAGGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAACC CATGATTGTTGTTAAGTATAAGGGTCAAGAGAAGCATCTTTCTGCTGAGGAAATATCATCCATGATTCTCACAAAGATGC GGGAGATTGCAGAGGCGTATCTGGATTCACCTGTTAAGAATGCAGTTATTACAGTGCCTGCTTATTTCAATGACTCTCAG CGCAAAGCCACTGTAGATGCTGGTGTCATTGCTGGTCTCGATGTTAAGCGGATAATCAATGAACCCACCGCGGCTGCAAT TGCATATGGCCTTGACAAAAAAATTAATTGTGTGGGAGAGCGAAATATTTTCATCTTTGACCTTGGTGGTGGCACTTTTG ATGTGTCTCTCGTTACAATTAAAGAAAAGGTCTTCACAGTTAAAGCCAGTGCTGGAAATTCTCACCTAGGAGGAGAGGAC ATTGATAACAGAATGGTGAACCACTTTGTGGAGGAGTTTAAAAGGAAGAACAAATTGGATATTAGTGGTAATGCAAAATC ACTTAGAAGGTTGAGAAGCGCATGTGAGAGGGCTAAAAGGGCACTGTCATCAATGGTTGTAACCACCATCGAGGTAGATG CTTTGTTTCAGGGGATTGATTTCTCTTCCTCAATCGCTCGTGCAAAATTTGAGGAAATCTGCATGGACCTCTTTGAAGAG TGTATGGAAACAGTGGATAGGTGCCTTGTTGATGCTAAGATGGACAAGATCAGTGTGCATGATGTTGTCCTTGTTGGTGG ATCTTCTAGGATACCGAAAGTGCAGGAGTTATTGGAGGAATATTTCAAAGGGAAGAATCTGTGCAAGAGTATCAATCCTG ATGAGGCCGTTGCTTATGGTGCAGCTGTCCAGGCTGCTTCATTGAGTGAAGGCATTAAGAATGTTCCTGACGTGGTGCTC TTTGATGTTACCCCGCTGTCTCTTGGTATATATGCAGAACGAGATGTCATGACCGTGGTGATTCCTAGGAACACTACAAT TCCTGTCAAGAAGACAAAAACGTGTTTTACAGCTTTGGAAAATCAACCCAATGTCAAAATTATGGTTTACGAGGGTGAGA GAGCTAGAGCTACTGATAACAATTTGTTGGGTTATTTGTGTCTTTATGGATTTCCTCCTGGTCCTCCTGGCCACCCATTT GATGTATGCTTTTCTATTGATGAAAATGGTATACTAACTGTTTCTGCTAAGGATATAACTAATGGTAACACGAGGGAGGT TACCATTACCAACAACATAGGAAGACTTTCAACCGGAGAAATTAGAAGATTAATTCAAGAAGCTGAGTATTACCAAGCTG AAGATCAGAAGTTCCTCAGGAAGGCCAATGCGATGAATGCTTTGAGTAGATACACTTACACAATGAAAAATGCTATGAAG CATACTAATGTAAGTTCTAAAAATTTACCAATGGATGAGCAGAAAGTTAGAGACGCAATTACAGAAGCTGAAAATTTGCT TGCTGACAACCAACAACTAGAAGCCTATGTGTTCGAGAACTGTTTGAACAAGGTGAGAAGCATCTTTGAACCAGTTGTAG TTAAAAGGAAGCGTGCAAGAAATGATGAGGTAGTTGCTTTGGATGAATAG
Protein sequence (LotjaGi1g1v0453900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKNYEGCAIGIDLGTTYSCVAVWQEEQGRVEIIHNDQGNRITPSFVAFTDEQRLIGDAAKNQAATNPENTVFDAKRLIG RKYSDPIVENDIRLWPFKVIAGVDDKPMIVVKYKGQEKHLSAEEISSMILTKMREIAEAYLDSPVKNAVITVPAYFNDSQ RKATVDAGVIAGLDVKRIINEPTAAAIAYGLDKKINCVGERNIFIFDLGGGTFDVSLVTIKEKVFTVKASAGNSHLGGED IDNRMVNHFVEEFKRKNKLDISGNAKSLRRLRSACERAKRALSSMVVTTIEVDALFQGIDFSSSIARAKFEEICMDLFEE CMETVDRCLVDAKMDKISVHDVVLVGGSSRIPKVQELLEEYFKGKNLCKSINPDEAVAYGAAVQAASLSEGIKNVPDVVL FDVTPLSLGIYAERDVMTVVIPRNTTIPVKKTKTCFTALENQPNVKIMVYEGERARATDNNLLGYLCLYGFPPGPPGHPF DVCFSIDENGILTVSAKDITNGNTREVTITNNIGRLSTGEIRRLIQEAEYYQAEDQKFLRKANAMNALSRYTYTMKNAMK HTNVSSKNLPMDEQKVRDAITEAENLLADNQQLEAYVFENCLNKVRSIFEPVVVKRKRARNDEVVALDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 619 | 614 | 1.8E-287 | – | |
| PANTHER | 6 | 619 | 614 | 1.8E-287 | ||
| SUPERFAMILY | 8 | 193 | 186 | 7.07E-68 | ||
| PRINTS | 8 | 21 | 14 | 4.2E-67 | – | |
| Pfam | 9 | 603 | 595 | 6.7E-212 | ||
| Gene3D | 10 | 385 | 376 | 2.4E-163 | – | |
| ProSitePatterns | 12 | 19 | 8 | - | ||
| PRINTS | 38 | 50 | 13 | 4.2E-67 | – | |
| PRINTS | 60 | 68 | 9 | 4.2E-67 | – | |
| Gene3D | 73 | 128 | 56 | 2.4E-163 | – | |
| PRINTS | 148 | 168 | 21 | 4.2E-67 | – | |
| Gene3D | 194 | 368 | 175 | 2.4E-163 | – | |
| SUPERFAMILY | 200 | 389 | 190 | 1.4E-60 | ||
| ProSitePatterns | 205 | 218 | 14 | - | ||
| PRINTS | 211 | 221 | 11 | 4.2E-67 | – | |
| Gene3D | 237 | 320 | 84 | 2.4E-163 | – | |
| PRINTS | 339 | 355 | 17 | 4.2E-67 | – | |
| ProSitePatterns | 342 | 356 | 15 | - | ||
| PRINTS | 371 | 391 | 21 | 4.2E-67 | – | |
| Gene3D | 389 | 515 | 127 | 2.6E-43 | ||
| SUPERFAMILY | 394 | 547 | 154 | 1.44E-44 | ||
| PRINTS | 397 | 416 | 20 | 4.2E-67 | – | |
| PRINTS | 477 | 493 | 17 | 4.2E-67 | – | |
| Gene3D | 516 | 617 | 102 | 1.3E-18 | ||
| SUPERFAMILY | 544 | 619 | 76 | 1.53E-8 | ||
| Coils | 576 | 596 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0453900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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