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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR029047
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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Download the entire search result as a CSV file.

We have found 189 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 5.731s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0048139.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 16159631 16163307 -
3 domain predictions
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Lj0g3v0059009.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 19484762 19488438 -
3 domain predictions
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Lj0g3v0059079.1
n.a. Heat shock protein [Medicago truncatula] gi|357448685|ref|XP_003594618.1| chr0 19498174 19500171 -
3 domain predictions
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Lj0g3v0059099.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 19506810 19508687 -
3 domain predictions
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Lj0g3v0059109.1
n.a. Heat shock protein [Medicago truncatula] gi|357448685|ref|XP_003594618.1| chr0 19514885 19516669 -
3 domain predictions
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Lj0g3v0059119.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 19521698 19523457 -
3 domain predictions
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Lj0g3v0081039.1
n.a. heat shock protein 70 [Saussurea medusa] gi|30962610|gb|AAP42157.1|AF509339_1 chr0 31557712 31559975 -
3 domain predictions
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Lj0g3v0081059.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 31566547 31568422 -
3 domain predictions
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Lj0g3v0081069.1
n.a. Cc-nbs-lrr resistance protein [Medicago truncatula] gi|357494411|ref|XP_003617494.1| chr0 31566547 31568422 -
3 domain predictions
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Lj0g3v0098949.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr0 41956837 41958209 -
3 domain predictions
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Lj0g3v0116859.1
n.a. PREDICTED: probable mediator of RNA polymerase II transcription subunit 37c-like [Cicer arietinum] gi|502110465|ref|XP_004493886.1| chr0 51471995 51475012 +
3 domain predictions
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Lj0g3v0120799.1
n.a. PREDICTED: heat shock cognate 70 kDa protein 2-like isoform 2 [Glycine max] gi|356568994|ref|XP_003552692.1| chr0 53736740 53741385 -
3 domain predictions
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Lj0g3v0168859.2
n.a. heat shock protein 70 [Saussurea medusa] gi|30962610|gb|AAP42157.1|AF509339_1 chr0 80643371 80646104 +
3 domain predictions
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Lj0g3v0188709.1
n.a. Heat shock cognate 70 kDa protein [Medicago truncatula] gi|357449647|ref|XP_003595100.1| chr0 92237922 92239488 -
3 domain predictions
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Lj0g3v0197419.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 96276636 96278120 +
3 domain predictions
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Lj0g3v0197429.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr0 96281041 96281538 +
3 domain predictions
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Lj0g3v0209669.1
n.a. Heat shock protein 70-3 [Medicago truncatula] gi|357503375|ref|XP_003621976.1| chr0 105171264 105175210 +
3 domain predictions
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Lj0g3v0211099.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr0 106282756 106284742 +
3 domain predictions
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Lj0g3v0211119.1
n.a. Heat shock protein [Medicago truncatula] gi|357490113|ref|XP_003615344.1| chr0 106289593 106291377 +
3 domain predictions
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Lj0g3v0211479.1
n.a. heat shock protein 70, partial [Ziziphus jujuba] gi|410369164|gb|AFV66576.1| chr0 106545366 106549282 -
3 domain predictions
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Lj0g3v0215999.1
n.a. heat shock protein 70 cognate [Salix gilgiana] gi|3986110|dbj|BAA34919.1| chr0 109612670 109619444 -
3 domain predictions
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Lj0g3v0256479.1
n.a. Heat shock protein [Medicago truncatula] gi|357503433|ref|XP_003622005.1| chr0 133145587 133147874 +
3 domain predictions
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Lj0g3v0265679.1
n.a. Heat-shock protein [Medicago truncatula] gi|357447047|ref|XP_003593799.1| chr0 137645560 137646221 +
3 domain predictions
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Lj0g3v0265689.1
n.a. Heat-shock protein [Medicago truncatula] gi|357447047|ref|XP_003593799.1| chr0 137646168 137646476 +
3 domain predictions
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Lj0g3v0273329.1
n.a. Heat shock protein [Medicago truncatula] gi|357503367|ref|XP_003621972.1| chr0 141666081 141668232 -
3 domain predictions
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Lj0g3v0273339.2
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr0 141669589 141671636 +
3 domain predictions
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Lj0g3v0273359.1
n.a. Heat shock protein [Medicago truncatula] gi|357448685|ref|XP_003594618.1| chr0 141679242 141680991 -
3 domain predictions
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Lj0g3v0291079.1
n.a. PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] gi|356569000|ref|XP_003552695.1| chr0 151117735 151120390 +
3 domain predictions
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Lj0g3v0297729.1
n.a. Heat shock protein [Medicago truncatula] gi|357490113|ref|XP_003615344.1| chr0 154785544 154786953 -
3 domain predictions
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Lj0g3v0318919.1
n.a. PREDICTED: heat shock cognate 70 kDa protein isoform 1 [Vitis vinifera] gi|225440324|ref|XP_002263599.1| chr0 166537883 166542519 +
3 domain predictions
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Lj0g3v0328039.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr0 171468888 171470462 -
3 domain predictions
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Lj0g3v0341519.1
n.a. PREDICTED: heat shock 70 kDa protein 16-like [Cicer arietinum] gi|502099113|ref|XP_004491392.1| chr0 178960597 178963463 +
3 domain predictions
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Lj0g3v0344479.1
n.a. n.a. chr0 180745804 180748108 -
3 domain predictions
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Lj0g3v0344479.2
n.a. n.a. chr0 180745804 180748108 -
3 domain predictions
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Lj1g3v1809980.1
n.a. PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] gi|356572327|ref|XP_003554320.1| chr1 21844719 21845055 +
2 domain predictions
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Lj1g3v2448130.1
n.a. Heat shock cognate 70 kDa protein [Medicago truncatula] gi|357449647|ref|XP_003595100.1| chr1 28620332 28622468 +
3 domain predictions
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Lj1g3v2580570.1
n.a. Heat shock protein [Medicago truncatula] gi|357448685|ref|XP_003594618.1| chr1 29494710 29496867 +
3 domain predictions
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Lj1g3v3137770.1
n.a. Heat shock protein [Medicago truncatula] gi|357502753|ref|XP_003621665.1| chr1 35688350 35689834 +
3 domain predictions
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Lj1g3v3137780.1
n.a. Heat shock protein [Medicago truncatula] gi|357490113|ref|XP_003615344.1| chr1 35691865 35693837 +
3 domain predictions
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Lj1g3v3137820.2
n.a. Heat shock cognate 70 kDa protein [Medicago truncatula] gi|357449647|ref|XP_003595100.1| chr1 35708711 35710737 +
3 domain predictions
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Lj1g3v3137820.3
n.a. Heat shock protein [Medicago truncatula] gi|357448685|ref|XP_003594618.1| chr1 35713051 35715866 +
3 domain predictions
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Lj1g3v3170100.1
n.a. heat shock protein 70 [Allium sativum] gi|371721824|gb|AEX55235.1| chr1 35927274 35927842 +
3 domain predictions
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Lj1g3v3217890.1
n.a. PREDICTED: heat shock cognate 70 kDa protein-like [Glycine max] gi|356567220|ref|XP_003551819.1| chr1 36446083 36448941 +
3 domain predictions
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Lj1g3v3218000.2
n.a. Heat shock protein [Medicago truncatula] gi|357503161|ref|XP_003621869.1| chr1 36479432 36483189 -
3 domain predictions
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Lj1g3v3218140.1
n.a. Heat shock cognate protein 70-1 [Theobroma cacao] gi|508786823|gb|EOY34079.1| chr1 36555030 36560218 -
3 domain predictions
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Lj1g3v3219230.1
n.a. PREDICTED: heat shock cognate 70 kDa protein 2-like isoform 1 [Glycine max] gi|356568992|ref|XP_003552691.1| chr1 36582599 36585548 -
3 domain predictions
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Lj1g3v3219240.1
n.a. PREDICTED: heat shock cognate 70 kDa protein 2-like isoform 1 [Glycine max] gi|356568992|ref|XP_003552691.1| chr1 36583188 36585548 -
3 domain predictions
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Lj1g3v3458490.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr1 40065310 40067392 +
3 domain predictions
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Lj1g3v3718110.1
n.a. Heat shock protein [Medicago truncatula] gi|357503425|ref|XP_003622001.1| chr1 42888984 42890927 -
3 domain predictions
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Lj1g3v3718120.1
n.a. Heat shock protein [Medicago truncatula] gi|357503367|ref|XP_003621972.1| chr1 42889209 42891913 -
3 domain predictions
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