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LotjaGi1g1v0489200.1

Overview

Field Value
Gene ID LotjaGi1g1v0489200
Transcript ID LotjaGi1g1v0489200.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Thiamin pyrophosphokinase 1; TAIR: AT1G02880.3 thiamin pyrophosphokinase1; Swiss-Prot: sp|B9DGU7|TPK1_ARATH Thiamine pyrophosphokinase 1; TrEMBL-Plants: tr|K7KGB3|K7KGB3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0489200
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:100212837..100220653) extracted from Lotus japonicus Gifu genome v1.2.

TGAGTATCATGTGCCTCAACAACCCCATCACAACCAGAATTTCACCTTAACATCTACCAACCAAAAAACCAAACTTAAAA CCTCAACCAACCATAGCTACCCAATACATAAATGACACATGGGTTGGCATCCATCCCCATCACAACTAATATATCTATAT ATAAACAATGCAATGTAAGTGTAATATTGAGAAGAAGAAGAGAAGAAGGCAAGGAAGAGAGATGGAGACAATGTTTATTC TTTTTAAAGAAATGTTAGTTGTTAGTAATGTTAGTAAATTAGTCTCACTCAAGGTTCAAATCGTGAACCCTTCCCTCATC ACCCTCCCAAACCCTTATGTTCTCTAGCTCTTACCGAGATATGGAGACAATGTGTCATTGTTCAAAGTTTCTTCTTCCAC CACCGGAAGAACCCACCGCCGCCGCTCTTTCTCCGACCACCACCACCACCACCACCACCACATACGCTCTAATTATTCTG AATCAAAGCCTCCCCAGATTTGCTCCTCTGCTTTGGGAACACGGTACTGCTCTGCTCTTTCATTCCTTCTCTATTTTTTC TTCATTCACGTTGATTTGGTTGCTAACTACCTACCTACCTATTTGCAGCAAAGCTACGAGTGTGTGCTGATGGAGGTGCC AACAGGGTGTTTGATGAAATGCCTCTTTTCTTCCCTCATGAACAACCTTCCCATGTTCGCTCCAGGTTCCTACTTCTTCC CTCTTTTCCTTCCCCTACACTTCTAGGTTCTCTCGCTTTTAGTGGTCCAGGACAATTTGACAAAAAGAGTTTATGGTTGC AGATTTCCCATTATCTAACTTGCTAGATTTCTAATAGGTACAAGCCTGATCTAATAAAAGGTGACATGGATTCAATCAGA AGAGAAGTGCTTGATTTCTATGCAACGCTGGTATCTCTATCTATCTATATGCTTATGGTTTTTGTGTGTCAATGTGCATG TAATGAAGAAAGTTAGTTCAAAACTCAACTTTCTGGTTCACACCAAATGACAATTATTCTGTTCCTATGTTACTGCTATT TACAAACTTGCATAAATCATATCAATGACTTATGCTTGTTTGCTTCCTGCAGGGAACTAAGATAATTGACGAGTCTCAGG ATCAGGATACTACAGATTTACACAAATGTGTAGCTTACATACGTGACTCCACACCAAATGTTGATAAATCATCAGTAAGT TTTGAATACATGCTCATACTTTCATCATTTAATTTTCTTTTGCGAGGAGGACACACGGAGAGTGTAAAAGTTCACAGGAT CACTATTAGTAATAAGTAGTAGTACAAGGACTATATTGTAATAATATAGAAGTTCATTGTAAGCTGGCATGAGCTGGCAT GTTAGTTACTGATTAGTTTAGAGTTTGTTAGGTTGTTATATAATTAGTTAGTGTCTAATCTAGGTATAAATAGCTATCTA CAGTGTTGTATTGCAATTCAGTTGAAATCAGAATATCAAAGTTTCTTCTTCTTCTTCAATCTCTCTCAATCTCTCTCAAG AGTTCTCACATTCTTTGATGGTATCAGAGCCCTAGATTGGGCTCTGCCATCACCAGCTTCCGCAGAAATGGTGCGAAACG CACAAATCAACAACAACAATGGAAATCAGCAAGCACATGTGGTTCAGGATCCAGCGCAAAATCCGATTTCGCCGTATTAC ATTCATTCCGGTGAAAATCCGTCGGCTACAATGGTATCTCCACCTCTCAATGGAAGGAATTACAGTGCCTGGGCTCGATC GATGAAGCGAGCACTTGTGGCGAAGAACAAGTTCAAGTTTATCAATGGCGAAATTCCAGTTGCAGTACCTGGTGATGCCA ACTACGATGCTTGGGATCGCTGCAACAGCTTGATCCATTCATGGATACTCAATTCGGTAACTTCTACAATTGCTAATAGC ATAGTTTTTGTTGAAAATGCTTGTGATGCTTGGAAGGATCTTCGTGATCGATTTTCTCAGGGAGATTTAGTGAGAATTGC TGAATTGCAAAATGAAATCAGTAGCTTAAAGCAAAATTCTATGTCAGTAAACGATTATTACACTGAAATCAAAACTCTTT GGGAAGAATTGGAGCACTATCGACCAATACCTCAATGTAGATGTACTGTTCCCTGTAGATGTGAAGCCATAGAGCAAGTA AAATTGTTTAGGGAGCAAGATAATGCTATTAGATTTCTTTTGGGACTGAATGAGAATTTTGGAGTTATTAAGTCTCAGAT TTTGATGTCTAATCCTCTGCCATCCATAGCAAAAGTTGTTTCTTTAGCTATGCAACATGAAAGACAGTCAGATTTTGAAG AAAGTGATGAATCAAAGGTTATAGTGAATGTTGCAGAAGGAAGAAAGTCATATGGCAGGGGAAAAATGCCTAATTCTAGT TATTCTGGATACAAGGGTGCAGGAAAATTTTGTACCTATTGCAAGAAGCCTGGTCATATTATTGACATCTGCTATAAACT GCATGGTTATCCCAACACTTCCAATACTAAATTTGCTTCTAATTCCACTACTCATGTAAACAATGTCAGTGGAGGTAGTG GAGGTTATGATACAGAAGATGATCAAGGAGATGACTCAATTCAAATAAAAGAGAGTGAAGAACCATTCACAGCTGATCAG TACAAAAGAATAGTGTCTATAATTCAACAAGTTGCTGGTTCATCAAAGAAAGTTGCAGAAACAGGACAAGTTGCAGTTAA TCATGTGATCAGAACTACTAATCATAATTCAGGAACCACAGGGCATGGTAAGCATTTTGCTCTCTCTTGTTCACAAAAGT ATGATAGTAGAGATTGGGTGATTGACTCAGGAGCTAGTGACCACATTTGTTTTAACAAGTTGTGTTTTGAGACTCTAGCT GAAGTAAAGCCTATAAGCGTTAGTTTGCCAAATGGAACAATCATAGATACCTGTTATGTAGGAACAGTTAGACTTACAAG TCTAATATTGTTAACTCATGTCTTATTTGTTCCTGAGTTTAGCTACAATTTAGTTTCAGTACATAAATTGGCAAAGAGAA ATCATTGTGACATCATTTTTGGTGAATTCACTTGTGATATTCAGGAGGTGCATTCCCAGAAGAGGATTGGTTTGGGTAGC TTGAAGGAAGACAAGTTATACCATTTAGTAGTTACAAGTCCTTCTAGTGTATGTTTTAGTGTTCAGCATTCTGTTTCTGA AATAAACAGCTCCACTCAGGTTATTCCACCTGGAGCTTTGTGGCATTTTAGGTTGGGACATTTGTCTCATGATAGGATTC AAGCTTTGAATAAATTCCATAGTTCAGTAAATATTAGTAGTTTACTAGTATGTGATATCTGTCATCTGGCCAAGCAGAAG AGGAAAATGTTCCCTGACAGTTTACATAATTCTAAGAATTGCTTTGACCTTGTGCACATGGACATTTGGGGGCCACTTGC TATTCCCTCAGTACATAATCACAAATATTTCCTTACTGTTTTGGATGATCACAGCAGATTTGTTTGGATAGTCTTGCTTA ATAATAAAGGACAAGTTCAGCATCAGGTTCAGTCATTTGTGGCCATGGTACAATCTCAGTTTGGGCATACTGTTAAAGCT ATTAGAACTGACAATGGGCCTGAGTTCATCATGCCATCTTTCTATTCTGCAAAGGGTATTCTACATCAGAGAAGTTGTAT TCATACACCTCAGCAGAATGGGAGGGTAGAAAGGAAGCATCAGCACATTCTGAACATAGCCAGAGCATTGCTTTTTCAGT CTAAATTGCCCAAGAAAATGTGGAGCTATGCTGTGTTACATGCAGTCTTCCTTATGAACAGGATACCAAGCAAGCTGTTA AATGATAGGTCACCTTATCATTTACTTTATCAAGAGAAAGCAGATTTAGAGAGTTTAAAAGTGTTTGGATCACTATGTTT TGCTAGTACAATATCCTCTCAAAGATCTAAACTAGACCAAAGAGCCAGGAAGTGTGTCTTCTTGGGATTTAAGCAAGGTG TAAAGGGATTTGTTTTGCTAGACATATCTACTCATGAGATCATAATTTCCAGAGATGTGGTGTTTCATGAACACATTTTA CCTTATAAGAGTTCTACACTACCTACTTGGGAGTGTTTAGATTTGCAAGCACAAGACAAGAAACCTGGAGATATTGAGAA GTCAGAAGTGCCACAATCTATACTTGAAAGTCAGATGCTGCAGAATGAAAAAGATTCTTCTGTTGTTCCAGAAGTGATTA CTGATAATTCTCAGGCAGAAAGGCTAACTTTATCTCCTCAGACTGAGAATCTGAACTTGCAACATTCCATAGATCTTGAT GCTACAGAGACAGAGAAAGAAGGGGAAGTTCCAAGTTTGAGAAGATCAAGTAGACAAGTAAAGAGGCCAGCTTTTCTACA AAATTTTCAATATAGTTCATTGCCTTCCAGAACTAGTACAGTACATAGCATCACACAGTACTATTCTCATGATAAACTCT CATCACCACATCAATCCTATGTACTTAGTATCTCATCAGATAAAGAGCCTACTACTTTTGAAGAAGCTAATAAGCATTCC CACTGGCAAGAGGCTATGAAGGCAGAGATATTGGCTCTAGAGAGAAATGGAACCTGGAAATTGGTAGACTTACCAAATGG TGTAAAACCTATAGGGAATAAATGGGTTTACAGGATTAAGAGGAATGCAGATGGCACTTTAGCTAGATACAAAGCTAGGC TGGTAGCAAAAGGATATAATCAAGTTGAAGGACTGGATTATTTTGACACTTTTTCTCCAGTTGCCAAACTCACCACTGTT AGAGTAATACTGGCCTTAGCAGCAGCACAGAACTGGCATTTGCATCAGCTGGATGTAGACAATGCATTTCTTCATGGAAC TTTAGATGAAGATGTGTACATGCAAGTCCCGGCAGGAGTTTTGACAGAGAAGCCTAATCAAGTATGCAAGTTGCAAAAGT CACTTTATGGACTTAAGCAGGCTAGCAGGAAATGGTATGAAAAACTTGCTGCTCATCTTATACATCTTGGATACACACAA ACTGCTTCAGATTACTCTTTATTTGTTAAATTTCAAGGAGACATGTTCACAGGATTGCTTGTTTATGTGGATGATGTTAT TCTGGTTGGTAACAGTCTCTTAGAATTTCAAATGGTTAAGGATTCTCTACATTCAGCATTTGGTATTAAAGATCTAGGTG TTTTGAAATATTTCCTTGGCCTAGAAGTAGCTCATTCTACCTCTGGAATCTCATTGTGTCAAAGGAAATACTGTTTGGAT TTGCTTCAAGAAACTGGAAATCTTGGTAGTAAGCCAGTTTCCACTCCATTGGATCCAGCTCTCAAGTTAACAATCGATCA AGGAAAACCTTGTGAAGATGTCATGGGATATCGCAGATTGGTAGGCAGATTGTTGTATTTGACACACACTAGACCAGATA TTTCTTTTGCAACACAGCAACTGAACAGTTCATGAGCCAACCTACTGATATACATTACACAGCAGCACTTAGAGTTTTAA AGTACTTGAAAGCATCTCCAGGACTTGGTTTGTTTTTTTCCAGTAACACTCCAATCACTTTACAAGGTTATTCAGATGCA GATTGGGCAGGTTGCTTGGATACGAGAAGGTCAATATCAGGGTACTGTTTTTATCTTGGTAATTCACTCATATCTTGGAA AGCAAAGAAGCAGGTCACAGTATCCAGGTCTTCTAGTGAAGCAGAATATAGAGCTCTTGCCTATGCCACTTGTGAACTAC AATGGCTACTTTACTTGTTGAAAGACTTGAGAATTTCTTGTCTTAAAACACCTGCTTTGTTTTGTGATAACCAAAGTGCT TTGCATATTGCTGCCAATCCAGTGTTTCATGAAAGGACTAAACACTTGGAAATTGATTGCCATGTTGTCCGAGAGAAGTT GCAAGCTGGAGTTGTCAAGCTATTGCCTATTCCAACAGCTTTGCAAGTTGCAGATATCTTCACTAAAGCTTTGCAGCCTC GGATCTTTCAGGGATTTCTGGCTAAACTTGCAATGATCAATATCTTTCCACCTTCAGCTTGTGGGAGGGTGTAAAAGTTC ACAGGATCACTATTAGTAATCAGTAGTAGTACAAGGACTATATTGTAATAATATAGAAGTTCATTGTAAGCTGGCATGAG CTGGCATGTTAGTTACTGATTAGTTTAGAGTTTGTTAGGTTGTTATATAATTAGTTAGTGTCTAATCTAGGTATAAATAG CTATCTACAGTGTTGTATTGCAATTCAGTTGAAATCAGAATATCAAAGTTTCTTCTTCTTCTTCAATCTCTCTCAATCTC TCTCAAGAGTTCTCACATTCTTTGAGAGAGTGAACTGATGTCAATTTTAAATCTAGGCATAGATAGTTTTGGGATAATTG AAGTGAATCGAGTCTGGTGTAGTATCAGCCGTTATCTGTTTTTGATAGCAGAGAATTACTATAGATATGTATTTAGTTGT ACAATTGAAAATTTGGAATTAATATCAGTTGTGCTCCCTGTCCCTTTAATAGCAGCTATGCGTTCTTGTTGCTGGAGCAC TTGGTGGGAGATTTGATCATGAGATTGGAAATATTAATGTGCTGTGCCGATTCTCCAACACACGAGTAATCCTTCTATCT GATGATTGCCTCATTCACCTTCTTCCGAAGAATTATTCTCACAAGATCTTTATTCAATCTTCGGTTGAGGGTCCGCATTG TGGACTCGTTCCCATCGGAATTCCATCAGGAAGTACTACTACAACTGGGCTCCAATGGGACCTGAGTAAGTATTGTGTAT AATTCTTTCATAATAATGCTGGTTCAATCCTGTAAGTCTAACTGACTGGCTGAAGATTAGTAGGATGGTAATCATTGCTA GTGACATGCTATCATGAAATTTCAATTCTTGTGCGGCTGTTGTTAATCAGTAAATAGGATGGAATACTTTATCTTTAATT TCCTTTTTCAGTCATCCAGTTCTGATCTTGTTTGCCAGTGGAGTTTGATGATTAGCATTTTATTTGACTATTTCAGATAA CACGGAGATGAGATTTGGAGGTCTAGTAAGCACATCAAATATCGTTAAAGAAGATATAGTAACAGTACAGTCGGATTCAG ATCTTCTGTGGACTATTTCTATCAAGAAGCTCTAGGTTCTACATGTTGCAAGGCTATTTGAATGGACTTCCCACCCTCTG GTGTGTTTGCAAGGCTTGTAATTAATTGCAGGCCCTTGCTCTGTGTTTACAAGATCTGAATCCGACTGTACTGTTACTAT ATCTTCTGTATGGACACCTTGCAAAGCAATGAAATCCACCCAGCAACAAGTGTGCTACTGCCACCATGACACAAACCAAA ACTAAACAGAAGGGACTCTTCAAAAACGAAACAGCATAGCAAACTGAACACACTAATAAAAGGCCTATTCCATTTAAAGG CCAGATCTTCTGTATGATTCATTCTTTTCATCTACTGTGTGAGTTATAATGACAATAGACTTAATTGCACTTTTGGTCCT CCACTTTGTTCAGTCGTACGATTTTTGTCCTTAACAAAAAATATTAGCATTTTACGTCCCTTATGTTAACTGTCATTTGC ACTTTTAGTTTTCCGTCCACAATTTTACAGAATATTCCGTAATTTGTTTTTAAAATAAAATTGGTTCAGAGACATTCATC ATCTTCATCCCATTTTTCCATCATCTTCGTAAAAATACAGAAACATTAAAATCTTCATCTTCATTTTTTCCTAGATCTAC CTAGTGCCTGATATATTGGGGTGTTTGATATATATCTTGAATGGAGTTTGATTTATA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0489200.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTTCTCTAGCTCTTACCGAGATATGGAGACAATGTGTCATTGTTCAAAGTTTCTTCTTCCACCACCGGAAGAACCCAC CGCCGCCGCTCTTTCTCCGACCACCACCACCACCACCACCACCACATACGCTCTAATTATTCTGAATCAAAGCCTCCCCA GATTTGCTCCTCTGCTTTGGGAACACGCAAAGCTACGAGTGTGTGCTGATGGAGGTGCCAACAGGGTGTTTGATGAAATG CCTCTTTTCTTCCCTCATGAACAACCTTCCCATGTTCGCTCCAGGTACAAGCCTGATCTAATAAAAGGTGACATGGATTC AATCAGAAGAGAAGTGCTTGATTTCTATGCAACGCTGGGAACTAAGATAATTGACGAGTCTCAGGATCAGGATACTACAG ATTTACACAAATGTGTAGCTTACATACGTGACTCCACACCAAATGTTGATAAATCATCACAGCTATGCGTTCTTGTTGCT GGAGCACTTGGTGGGAGATTTGATCATGAGATTGGAAATATTAATGTGCTGTGCCGATTCTCCAACACACGAGTAATCCT TCTATCTGATGATTGCCTCATTCACCTTCTTCCGAAGAATTATTCTCACAAGATCTTTATTCAATCTTCGGTTGAGGGTC CGCATTGTGGACTCGTTCCCATCGGAATTCCATCAGGAAGTACTACTACAACTGGGCTCCAATGGGACCTGAATAACACG GAGATGAGATTTGGAGGTCTAGTAAGCACATCAAATATCGTTAAAGAAGATATAGTAACAGTACAGTCGGATTCAGATCT TCTGTGGACTATTTCTATCAAGAAGCTCTAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0489200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MFSSSYRDMETMCHCSKFLLPPPEEPTAAALSPTTTTTTTTTYALIILNQSLPRFAPLLWEHAKLRVCADGGANRVFDEM PLFFPHEQPSHVRSRYKPDLIKGDMDSIRREVLDFYATLGTKIIDESQDQDTTDLHKCVAYIRDSTPNVDKSSQLCVLVA GALGGRFDHEIGNINVLCRFSNTRVILLSDDCLIHLLPKNYSHKIFIQSSVEGPHCGLVPIGIPSGSTTTTGLQWDLNNT EMRFGGLVSTSNIVKEDIVTVQSDSDLLWTISIKKL
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR13622
9 275 267 4.4E-124 –
PANTHER
PTHR13622:SF12
9 275 267 4.4E-124 –
PIRSF
PIRSF031057
22 276 255 1.2E-68
IPR016966
SUPERFAMILY
SSF63999
36 193 158 2.35E-47
IPR036759
Gene3D
G3DSA:3.40.50.10240
43 184 142 5.0E-48
IPR036759
CDD
cd07995
44 271 228 6.51053E-60
IPR007371
TIGRFAM
TIGR01378
45 271 227 1.2E-59
IPR006282
Pfam
PF04263
58 184 127 8.4E-41
IPR007371
Gene3D
G3DSA:2.60.120.320
185 275 91 3.1E-29 –
SUPERFAMILY
SSF63862
193 275 83 6.15E-25
IPR036371
SMART
SM00983
203 267 65 1.3E-9
IPR007373
Pfam
PF04265
203 268 66 3.6E-20
IPR007373

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004788
Molecular function Thiamine diphosphokinase activity Catalysis of the reaction: ATP + thiamine = AMP + thiamine diphosphate.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006772
Biological process Thiamine metabolic process The chemical reactions and pathways involving thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.
Subterm of
GO:0009229
Biological process Thiamine diphosphate biosynthetic process The chemical reactions and pathways resulting in the formation of thiamine diphosphate, a derivative of thiamine (vitamin B1) which acts as a coenzyme in a range of processes including the Krebs cycle.
Subterm of
GO:0030975
Molecular function Thiamine binding Interacting selectively and non-covalently with thiamine (vitamin B1), a water soluble vitamin present in fresh vegetables and meats, especially liver.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0489200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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