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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0497100 |
| Transcript ID | LotjaGi1g1v0497100.3 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cationic amino acid transporter; TAIR: AT1G05940.1 cationic amino acid transporter 9; Swiss-Prot: sp|Q9C5D6|CAAT9_ARATH Cationic amino acid transporter 9, chloroplastic; TrEMBL-Plants: tr|K7MUP2|K7MUP2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0497100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101254379..101260325) extracted from Lotus japonicus Gifu genome v1.2.
GTCAGAAGTGTCACCTTCTTCATGACTTCATATCAACCACCATCACCATGTAACCAGAACCATTTCCTTCCATCATGGGA CTGGGTGGTGCTACTCATTCTTCCTCTTCTTCATCTTATTGCTCCCGTTTTTGGTCGTCGGCGCTCCGCTCCAAGCTCCT CGTCTCGCCGGCGGAGAAGGCTGCTCGTGACAGCTCCGGCAGGGGACTCTCCCGCCGGCTTGGTGTCCTCGACCTCCTGC TCCTTGGAATCGGCGCTTCCATTGGTGCCGGCATCTTCGTCCTCACCGGAACCGTTGCCCGCGACACCGGACCCGGTACG CCTCAAATTTAATTGAAACGCATTGTTCAAAATTTTGTCAAGTTTTGTTGTTGTTGCTATCATCATTGGTTTGCTTTAGC AAGATGAGTACTTTTAGATTGTCCTGCATCAGACATGGCTGTTTCAAAATGTGTGTATTAGTTACTTATTCCTCCCTTCC TTATTAACGGTCTACTTAGTCGAAAAACAAAATTGTTCTTATATATCTGTTCACTTATAATTTCAAGAGAGCATTCAATG ATATGTTTCCAAGTAATGCCCTTGTGAGTTGTGAGAATAATAAATGAGAAAAAATAAAATACATTCAAAAGGGTAAAATA GGAAATCAAATAATACATTTATGAAAATCAACAAAATTAATGTGTTTCTTCTCTCACTATTATGGTATCCTACATTCCTA CCCATGTTGGTGAAATTCTATAAATTAAAGTAGAAAAGTTGGACTGAGCTAAGAGTATCTGATGGTGCCTGAGCCTGAGA ACTGTCCTGTGTTTGAAAGCAGTACTGCAACTATTATAAATTATTATGTTTCATGCTTGACAATCAACATGTGAGATGTA ACTCTTAATTTGCAACTTTGAGAGGTTTATTTATTCTTGATAATGATCAAAATGGGAAGGTTGTACATGATAAATGAAAA TCATTGAATGCTTGCTTGTTAAGGCTCATTCATGATTCATGCCTTGTAGCTGGGATAGCCGGATTGTTGACTTTATTGTG TTTGCTAGGCAGTAGTTTATGTAACGAATAAGGGATAGCTAAAATTTCGATTCAGTCTTTTGTAATTTTATAATGCAATC TGGAGGGCACAAATAGAACAAGTTTTCTCATTCCATTTTCCACATTCTCTAATCTTTGCTAGGCATCATGAGGGGAAATT GTATACTGTCTGTATAGATCTTTCTTCCTCTTCGGTTTTCACTTTCTCCCTTCATCTTATTGATTTTCATACCCACTATG GGTTAGTACCCGTGTTTCTACGGATATGTATGTGTATGACAACAACATAGATTTTCTATGCTAGACTTCTTCTCCATGAA ACTTGTATCCATCTTAATGCTAATTGATGTGCTGAGACAGAATTATTCTGATTTCTTATGTTGAATAATCGACCTTCATT ATGTATTTATTTATATAAATAGCTGCTTTAAAATATTGGTCAGGACATGTAATGGTTACTTTGCTTTACCTTTCCAAACT TACTGGCTTAGTCGTGGTTTCTTTCTGTAATGCAGGAGTAACAATAAGTTTTGTACTTGCGGGAACATCCTGTGTTATAA ATGCACTCTGTTTTGCTGAGCTAGCTTCTCGATTTCCTGCTGTTGCTGGAGGGGCATATCTATATGCATATACTGCTTTT AATGAACTTACAGCTTTTCTTGTTTTTGCACAATTAATACTCGACTATCATATTGGAGCAGCTACTGCAGCAAGAAGCTG TGCAAATTATTTGGTAACAATTCTAGAGCTCTTCCCCGTTCTCAAAGATAACATTCCAAAATGGATTGGACATGGTCAAA ACATTGGAAACGTGCTATCCATCAATGTCTTAGCTCCAATTCTTGTACTGCTTCTCACTTTTATTCTCTGTCGGGGTGTT CAAGAATCATCAGTTGTGAATTCGTTTATGACAGTGACCAAGGTTCCTTTCCATCTTACCAGTTACCACTTCCAGAATAT AACATTAAACATTGGATGAAAGCTGGGGCTTATGTGAGAACAGAATCACAAGTTATTTTACTGTTTGTTGCAGGTGGTCA TCGTTATTATTGTCATTTTTGCTGGAGCTTTTGAGGTTGATGTTTCGAACTGGTCTCCCTTTGCTCCAAATGGTATGAAA AGCATATTTACAGGAGCTACTGTAGTCTTCTTTGCATATGTTGGATATGATGCAGTTGCCAATGCTGCTGAAGAATCTAA GAGACCACAGGTATATTATGTTTCGTGAGATTGCTCTGCTAGTTTATGAATTTCCCTGATGCCTTATATGCTATTTAATG TTTCTGTAGAGAACAATAATGATGTTAGAAAAAAAATTGTGACTACTTGGAGATGGTACATGGGTGTTTAGCTATGTTGG ATCATTAATTCTTAGTTCCTTCATGAATATCTTGGGTGAAGGGTGATTGTTTCTTTTGGGAATGAGAATAATTTGAAGAT GGCAAATCATTGTTTTACTATGCCGTTCACAATATGAAAAGCATATTTTCAGATCTACTTGTACATCAGCATAACAGTTT AACAGAAACTATCTGGCAATGGTATATTTATTTTGTGTCTAGTTTAAACTCACGCTTTCCATTCTAACTTTTTCTCCTCT TTTGTTGTCATGAATTAGTTGATGATGTTTTTTTAGGGTGTTTTTCTGAGTTTTTAAGGGAGGGGATGGGAGCGTAAGGG AGGGCGAAGGAGGGCAAGCCCTTCCCTTGTTTGGGAGTTCAAATACCCCAATTTGGAGGAAATAGAAAATATAACTGTTG GGGAGAGTCACGGCGAGGGCCCATGGGGCAAGGTCGAGGGGAAACACCAAGGAGATCTTGGACACCACATCTATGAAGAC TTTCGACACAAGGAGTCGTCATGGTCCCACGAACCATCGGCTCTGATACCAGTTGTTGGGGAGAGTCACGGCGAGGGCCC ATGGGGCAAGGTCGAGGGGAAACACCAAGGAGATCTTGGACACCACATCTTAACCCAAAACCTTAAGGCATTAGGTTTAT GGGTCACATCTCTTATAAACTCTCCCTCTCACCTTGACTTCTCCGATGTGGGACTTGACTCCAACACTTGATTCCAACAA TAACTAAGAGGGTCTTGGAGGGTATTCAAAAATTCCCCAACCCTTCCCTTTCTTCTTATAAACTAACAAATAAGGGGAGG GCTTCTTAGAAGCCTCACCCTTCCCTTCTTCCCCCCCCCCCCTCTCTAAAACTCAACTCGCAAACCCACCCTTAATCTTT CTAATTTCTAACATTTCAGCGCGATTTGCCGATAGGCATAATCGGAAGCCTCTTGGTATGTCTTGCGTTGTACATTGGTG TATGCTTAGTGATTACAGGAATGGTTCCATACAATCTCCTAGGAGAAGATGCTCCATTGGCTGAAGCTTTTGAATCTACA GGGTTAAAATTTGTTTCGGTTCTGATTAGCATTTGTGCTATTGCTGGACTTACGACAACACTCCTTGTTGGTCTCTATGT TCAGGTGAATCACTTGTGAATTATAAATTAATTGTTGTGCCTTGTGGCATGTGCTAATGTACATGATGTTTCTGTTGAGC AGTCTCGGCTATATCTTGGGCTTGGCAGGGATGGTTTACTACCCGCAATATTTGCTAAAGTTCACTCCAAACGCCACACT CCCATTCATTCTCAGATTTGGGTTGGCTGTGTTGTCAGTGTTTTGGCTGGACTGTTGAATATGCACATGCTCTCACACAT TCTTTCTGTTGGTACACTTGTAAGATTCAATTTCTAATTTTATGGCACTGAGGTTGTCAACAAAATATATATATCCATAT TATCTTGTATGATGTAGTGTGTTTGTGACATAGAAAAGACGGTGAATGTCTTGCTCAGTGAACTTGCCCTCTTTTGTTGG ATGATGATCCTCTCATATGAAACTTCACATGACACTCATCTTGTAATTCTATATCTATCTTTCTCTTTATATGTATTAAA TATGTCAGACCCTCTGAATAATTATGAAGAAAGAGATAGACACAATTTTACATGACATTGTTATTTTACATGAGAGGATC CCAATCCCAGTGTTGTTTAACATATGTTCAGAAAACGTGCAGCATATTTTCCATTTAGGGAATAATACAACTTGCTGTAC CTCGACATTGACAAGAGTGTACTTCATAGGTGTAATTGAATAGTGTTTGTAAATATTTAGTTAATGCCCCACTCATGGTA TTTGCACTTATTTTAGACTGGCTATTCAGTTGTTTCGGCATGTGTTGTTGTACTTCGCTGGAAGGATAAGACAACTGGTC AAGTATCATCTTCAGCAAAGAGGGAAGGTGTAATTTGCCTTATTGCTGTTGCTGTTTCTGGATTTATTGGGGGGCTCTTT TTCCGCTATGATGCTTCACCTATTTTGTTGATTCTGGCTATACTTATTGGAGCTGGTGCTTCTGCTGCTCTTCATTTCCG CCAGGTGAGTGTGCTTTTGTATTTTATTAACTGTTTGTTGCCTGGACTTCTTCAAAATGGTTTGGTTAAAAACTAATTAA TTTGATATAACATGGCATACAAAACAAATCGAAAGCACTAAAGGATATTCAGTTATAATTTAATTTTGCTTTAGTACAGG AGGGAAATTAAAAACCATCTTTGATTGAATAACTAATCAAAGGTAAAATTAATATTGATTTAATTCAGTTTCAAAAAAAA ATATTGATTTGGTTCGATGTAATTTGCAACTTTTGCATGCTTAAAGGACTCTTGGCTTGTTGGGGAGGGGAATACGAAAT GATTTCATGAGAAGAAGATCAAGTACTGAGGTTGTCTCATACATTCTGCAATGGTGACTCAAATTTATTATATATAGGGG TGGATAACAAGCTAAATATGGGTTGAAACTTGAAAACCAATATCAAGGCCAACATGGTGTGTAAGCAGGTTTGGGCCAAC TCGCGGATCCGATCAAGCCGACTTGATCCAAGTAAAATTATAGCTCGGCTTTGGTAGGATAGGAAGGAAAAGAATCTTGA TCCAAGTGAGGTCAGGTTTTGGGTCAGGAAAATTGAGTTGAGGCCTCGATCAATCTGGGCCGACTCGATATATCATTATT TTATATATCTCTTTCAAAAAAATCATTGTATATAATCTAAAACAAAAATTGATCTTTAATTGGTTTGGATCTACTTTCTC TCAAATCTGACCTGACCTGATTAAACCTCTATGTTATTTTCTCTCATTAATTCCTTTCTGTTCTATCATTTTGCTTTCCA GGTTTATGCAGCAGATTCACCAGGGTTTTCTTGCCCTGGGGTTCCCCTTGTGCCAAATGTTTGCATCTTTTTCAACATGT TCTTATTTGCCCAGGTATGCCCATGATCTCTACTATTTGAAAGTTTAGCCAGAATTAATACTGTCTTAGAAAACGTTAAA GTTAATAGTTTTAATATTTCTACATAAAAACTGACAAATGATGATGAACTTCTGTTGACAGTTACATCATGAAGCATGGC TGAGATTTGTGATTATTAGTGTTGTTATGGTTGGTTTTTATGCAATATATGGGCAGTATCATGCTGACCCCAGTGCAGAG GAGAATGCTGTTTATCATGAGGCACCAGAGGAAGAAACTTGATGAGTTATCAGGTCAATATTAAACAATGTGGTTTTCAT TGGCCAATGGGGAGAAGGGGGTGTTGGTTAAAATGTATGTAGCAAATAAGCTATTTGTTCTTTCTGTTAGGAGTGTGAAT GTCCATCAGGTATAGTCAGATTGTATATGGCACTGCCAGCAAGCATAATACATTAATACCCATTAGGGATTTATATTGCT AAATTGCATATGATAAAGAAAAAAGAAAAAAGAAACTAAGGCAACCATGTGGTGCACAACACAATTTTATATTGCTAAAT TGTATATGGTAGAAAAGAAAAAAGAAA
CDS sequence (LotjaGi1g1v0497100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGACTGGGTGGTGCTACTCATTCTTCCTCTTCTTCATCTTATTGCTCCCGTTTTTGGTCGTCGGCGCTCCGCTCCAA GCTCCTCGTCTCGCCGGCGGAGAAGGCTGCTCGTGACAGCTCCGGCAGGGGACTCTCCCGCCGGCTTGGTGTCCTCGACC TCCTGCTCCTTGGAATCGGCGCTTCCATTGGTGCCGGCATCTTCGTCCTCACCGGAACCGTTGCCCGCGACACCGGACCC GGAGTAACAATAAGTTTTGTACTTGCGGGAACATCCTGTGTTATAAATGCACTCTGTTTTGCTGAGCTAGCTTCTCGATT TCCTGCTGTTGCTGGAGGGGCATATCTATATGCATATACTGCTTTTAATGAACTTACAGCTTTTCTTGTTTTTGCACAAT TAATACTCGACTATCATATTGGAGCAGCTACTGCAGCAAGAAGCTGTGCAAATTATTTGGTAACAATTCTAGAGCTCTTC CCCGTTCTCAAAGATAACATTCCAAAATGGATTGGACATGGTCAAAACATTGGAAACGTGCTATCCATCAATGTCTTAGC TCCAATTCTTGTACTGCTTCTCACTTTTATTCTCTGTCGGGGTGTTCAAGAATCATCAGTTGTGAATTCGTTTATGACAG TGACCAAGGTGGTCATCGTTATTATTGTCATTTTTGCTGGAGCTTTTGAGGTTGATGTTTCGAACTGGTCTCCCTTTGCT CCAAATGGTATGAAAAGCATATTTACAGGAGCTACTGTAGTCTTCTTTGCATATGTTGGATATGATGCAGTTGCCAATGC TGCTGAAGAATCTAAGAGACCACAGCGCGATTTGCCGATAGGCATAATCGGAAGCCTCTTGGTATGTCTTGCGTTGTACA TTGGTGTATGCTTAGTGATTACAGGAATGGTTCCATACAATCTCCTAGGAGAAGATGCTCCATTGGCTGAAGCTTTTGAA TCTACAGGGTTAAAATTTGTTTCGGTTCTGATTAGCATTTGTGCTATTGCTGGACTTACGACAACACTCCTTGTTGGTCT CTATGTTCAGTCTCGGCTATATCTTGGGCTTGGCAGGGATGGTTTACTACCCGCAATATTTGCTAAAGTTCACTCCAAAC GCCACACTCCCATTCATTCTCAGATTTGGGTTGGCTGTGTTGTCAGTGTTTTGGCTGGACTGTTGAATATGCACATGCTC TCACACATTCTTTCTGTTGGTACACTTACTGGCTATTCAGTTGTTTCGGCATGTGTTGTTGTACTTCGCTGGAAGGATAA GACAACTGGTCAAGTATCATCTTCAGCAAAGAGGGAAGGTGTAATTTGCCTTATTGCTGTTGCTGTTTCTGGATTTATTG GGGGGCTCTTTTTCCGCTATGATGCTTCACCTATTTTGTTGATTCTGGCTATACTTATTGGAGCTGGTGCTTCTGCTGCT CTTCATTTCCGCCAGGTTTATGCAGCAGATTCACCAGGGTTTTCTTGCCCTGGGGTTCCCCTTGTGCCAAATGTTTGCAT CTTTTTCAACATGTTCTTATTTGCCCAGTTACATCATGAAGCATGGCTGAGATTTGTGATTATTAGTGTTGTTATGGTTG GTTTTTATGCAATATATGGGCAGTATCATGCTGACCCCAGTGCAGAGGAGAATGCTGTTTATCATGAGGCACCAGAGGAA GAAACTTGA
Protein sequence (LotjaGi1g1v0497100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGLGGATHSSSSSSYCSRFWSSALRSKLLVSPAEKAARDSSGRGLSRRLGVLDLLLLGIGASIGAGIFVLTGTVARDTGP GVTISFVLAGTSCVINALCFAELASRFPAVAGGAYLYAYTAFNELTAFLVFAQLILDYHIGAATAARSCANYLVTILELF PVLKDNIPKWIGHGQNIGNVLSINVLAPILVLLLTFILCRGVQESSVVNSFMTVTKVVIVIIVIFAGAFEVDVSNWSPFA PNGMKSIFTGATVVFFAYVGYDAVANAAEESKRPQRDLPIGIIGSLLVCLALYIGVCLVITGMVPYNLLGEDAPLAEAFE STGLKFVSVLISICAIAGLTTTLLVGLYVQSRLYLGLGRDGLLPAIFAKVHSKRHTPIHSQIWVGCVVSVLAGLLNMHML SHILSVGTLTGYSVVSACVVVLRWKDKTTGQVSSSAKREGVICLIAVAVSGFIGGLFFRYDASPILLILAILIGAGASAA LHFRQVYAADSPGFSCPGVPLVPNVCIFFNMFLFAQLHHEAWLRFVIISVVMVGFYAIYGQYHADPSAEENAVYHEAPEE ET
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 48 | 48 | - | – | |
| PANTHER | 7 | 558 | 552 | 2.1E-283 | – | |
| PANTHER | 7 | 558 | 552 | 2.1E-283 | – | |
| Gene3D | 45 | 485 | 441 | 1.5E-109 | – | |
| Phobius | 49 | 70 | 22 | - | – | |
| TMHMM | 49 | 71 | 23 | - | – | |
| Pfam | 49 | 460 | 412 | 7.6E-51 | ||
| Phobius | 71 | 81 | 11 | - | – | |
| TMHMM | 81 | 100 | 20 | - | – | |
| Phobius | 82 | 104 | 23 | - | – | |
| Phobius | 105 | 115 | 11 | - | – | |
| TMHMM | 113 | 135 | 23 | - | – | |
| Phobius | 116 | 136 | 21 | - | – | |
| Phobius | 137 | 176 | 40 | - | – | |
| Phobius | 177 | 199 | 23 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 200 | 205 | 6 | - | – | |
| Phobius | 206 | 227 | 22 | - | – | |
| TMHMM | 207 | 229 | 23 | - | – | |
| Phobius | 228 | 246 | 19 | - | – | |
| TMHMM | 239 | 261 | 23 | - | – | |
| Phobius | 247 | 268 | 22 | - | – | |
| Phobius | 269 | 279 | 11 | - | – | |
| Phobius | 280 | 306 | 27 | - | – | |
| TMHMM | 282 | 304 | 23 | - | – | |
| Phobius | 307 | 325 | 19 | - | – | |
| Phobius | 326 | 349 | 24 | - | – | |
| TMHMM | 327 | 349 | 23 | - | – | |
| Phobius | 350 | 381 | 32 | - | – | |
| Phobius | 382 | 400 | 19 | - | – | |
| Phobius | 401 | 405 | 5 | - | – | |
| TMHMM | 402 | 424 | 23 | - | – | |
| Phobius | 406 | 424 | 19 | - | – | |
| Phobius | 425 | 439 | 15 | - | – | |
| TMHMM | 439 | 458 | 20 | - | – | |
| Phobius | 440 | 458 | 19 | - | – | |
| Phobius | 459 | 463 | 5 | - | – | |
| Phobius | 464 | 483 | 20 | - | – | |
| TMHMM | 465 | 483 | 19 | - | – | |
| Phobius | 484 | 494 | 11 | - | – | |
| TMHMM | 493 | 515 | 23 | - | – | |
| Pfam | 494 | 543 | 50 | 9.5E-15 | ||
| Phobius | 495 | 515 | 21 | - | – | |
| Phobius | 516 | 520 | 5 | - | – | |
| Phobius | 521 | 539 | 19 | - | – | |
| TMHMM | 522 | 544 | 23 | - | – | |
| Phobius | 540 | 562 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0497100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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