Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0497200 |
Transcript ID | LotjaGi1g1v0497200.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | CTP synthase; TAIR: AT3G60380.1 cotton fiber protein; Swiss-Prot: sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase-1-binding protein; TrEMBL-Plants: tr|A0A0B2QJT7|A0A0B2QJT7_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0497200 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101268230..101272222) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAGAAGACAATTACCTTAATCTTTGTTCAAAAAGAAAAAGACAAGTAACTTAATTTTTTATCTTCCCAGTTTGTCCC TGTTACCAAGGATGCACTTTTCCTTGGCTTCAAATCAAAGTCTTCCTTTCTTCATTCCTCATCTCACTCCCACAAATCCC AACCCCACCACAGAAGAGGAGGAGGAGGAGGTTCATCAATGGCGGATTCCACCACCCTCCACCCCAAATCCACCTCACGG ATCCAACCAAAACCCATCAACCAAGGTAAGTCTTGCTCAGGTTTCCTCTTCAAAGTTCTATTCTTAGCACTGTTAGTCCT TGTTCTTCCACTGTTTCCTTCACAAGCTCCTGAATTTGTGAGCCAAACCGCGCTCACTAAGTTCTGGGAGCTTCTTCACC TTCTCTTCATTGGCATTGCTGTGACCTATGGTCTGTTTAGTAGAAGAAATGCAGAGTTAGATTCACATGTAGAAACCCAC TCTAGTGATGGTAGTTCACCTAGTTATGTGTCTAAAATGTTTCCGGGTTCCGCGCTTTTCGGTGATGGGGGTGAAAATTC ATCTGGGTTTGATGAGAAGAGGGTGATGCATTGTTGGGATCCTCCTCAGAACTATGATGGGGAGCAGCCAGGTGGGGTGT GTTCTAATGTTGGGGGTACTGTTGGTGTTTTTGATGAACAGTACAAACCCCAATTGCCAATTCCTGAAGATAATTTTGGT TTTCCGTTTAGATATGATGGGAATGGGACCAATGTTGTTCAAGCTTGGAATTCTGAGTATTATCATAGTGAGCCAGTGGT GGTTGTTGCTCAACCATATGTCTCTGCTGGTGAATCTGGTGAGGTTGTTGGTCATAAACCACTAGGTTTACCGGTTCGCA GTTTGAGATCGGTTGCAAGAGAAGGGGATGGTCCTAACTTCATCAATGAGAGTGATTCCAGTTCAGGTTCAAGGGCTTCA TCTAAGAGCTCTGATAAGAGCAGAGGTAATAGGGAGTTTGGGGATCTTGGTCCTTCTAATCTGGAGAAACAATTTAATGA TGCTGCTGCTGTTGGTGGATCAGCATCCCCGATTCCCTGGCGTTCGAGGGGTGGAAAGATGGAAAGGGAGAAAAGCTATG GCAATGTAACTCATCCTTCACATTTTAGGCCTCTTTCGTTTGATGAAGCAGTTGGTTCTTTACAGTCTACAACATCTTTC TCTCCCCACAGTAGTATGTATTCTTCCTTGGATTCGATTTCATCAGATAAAATGAACGTTCAAGGGGAAGAAATGAGGCA AATGGAAGGTTACTATGTGCCTGCTTCAGAAAATATGAATTTCCAAGAGAAAGATGTGGGAAGAAAGAAGACATCCTATG TGCCTCCCCCAGAAAGTATCAATTTCCAAGACGAAGATATGGAACGATGGAAGGCTTCCTATTTGCATGCTTCTGAGAAA ATGAATTTCCTAGAGAAAGACATGGGAAGAAAGAAGGCTTCCTACGTGCCACCTCCAGAAATTATCAATTGCCAAGAGGA AGATATGGAACGAATGAAGACTTCCTATGTGCCCACTTTCGAAAAAATGAATTTCCTAGAGAAAGATAAAGGAAGAAAGA AGGCTTCCTATGTGCCTCGTCCAGAAAATATCAATTTCCGAGAGGAAGATATGGAACATAGGGAGACTTCTTTTGTGCCA GCTTCTGAAAATACTAATTTCCAAAAGATAGATATGGGAAGGAAGATTTCCCGAGGGCGAAATAGGAGGATATCTGCTAA AGGAAAATATGCTGATGTTTCTAATCCATCACATTTCAGGCCAATTTCAGTTGATGAAACTCAACTTGAAGCACTCAGCT CACAGTGTTTCCAGTCTATGGGATCTTTTTCTTCCCAAATGAGAATGAATTCTTCCTTGGATTCAATTTCGCCGGATAAT ATGGACTTCCGAGAGGAAGATATGAGACAAAAGAAGACTTCCCCTATGCATGCTTCAGAAGATATGAGTTTCCAGGCAGA AGAAGTGGGAGACAACAACACTTCCTATGTGCATGCTTCAGAAAATGTGAATTTCCAAGAGGAAGACATGGGACACAAGA AGAGTTCCTATGCGCATTCTTCAGAAAATGTAAATTTCCAAGAGGAAGATATGGGATACAAGAAGAGTTCCTATGTGCAT TCTTCAGAAAATATGAATTTCCAAGGGGAAGATATGGGACAAAAGAAGAGTTCCTTTGTGCATTCTTCAGAAAATGGGAA TTTCCAAGAGGAAGATATGGGACACAAGAAGACTTCCTATGTGGCTGCTTCTGAAAATGTGAATTTCCGGGAGGTGGATT TGGGAAAGAAGATTTCTCAGGTGTCTTCAATGAATCTAATGATGGAAACTAAAGGAAAATATGCTGCTGTTTCTCATCCT TCACATTTCAGGCCGATATCTGGTGATGAAGCTCAATTTGAATCACTTGGCTCACGGTCTTTCCAATCTGTGGGATCTTT CTCATCTCAGACGAGTTCACGCTCTTCCTTAGACTCTGTATCATCAGAAAATATGAACTCGCCGAACGAAGATTTAGGGG AAAAGAAGAGCTTGCATGGGTCTTCTTCTTCTTCTTCAAGTTCACCATCACTTTTGGCTAGAAGGAATGGGGAAGCTTCA TTGCAATCACTTCAAGATGGTACATATAAAATCAGTAGCATGCTCCATGATGATCTGAACTGTGGACTGAATGATGAATT GAGCGGCTCGAGCGGGACAGGAGGTGAGGATCGTCCCGCACACAAGAAGGAGTCAGGGAAGCATGCTTTCCAGTCAGATC CGGAAAAGCCGGCAAGGCTACCTAAAACTCCATCACGGGGGAAATCAGTAAGAACAAGAAGAGAGAGTGGGTCGACTTCA GGGACAATGAGAATAGGAGAAGTATCTACCAAGCAAACTGATGAAAAGGTTGAAAAGAAGCCTTACAATGTTGATACAGT GTTGAAGAAAGATAGAATGAAAAGTGAAGAACCAGAACTTCTATCCAAAGGAGTCAGTAAGAATTCTCTGGATTCCTATT CTTCTAAGCCTGAGGTTACACTTTCCAAACATATGAAGAGAGATAAACTAGAGCCATTCAAGAATGTACCTAAGGAAGAC TCGGATGAAGATGATGGGGAGGTGTCTGAGTATGTCAATGATTCAGGACTAGATTCTGAGGTGGATAGGAAAGCTAGTGA GTTTATAGCCAAGTTCAAAGCTCAGATCAGGTTTCAGAAAGTGGGATCAATTGAAAGCTCAAAGGATCAAAAGACCATTG GAAACAATGTTAGGTGATTATTTGTAAACTATTGTACTATTTCTAACCAGATGAATATGAAGTTCATCAGAGATCTTATA ATTATTCTATTTCATTGAGCTTTCTTCATTTTAGGAGATTTGATTTCTTTTTATGCTTTGTATAACCGGTGAAGTTCAAA TTATTATTTTGTGGCAGCAGGTATTCCACTTATTTATCTTCACATACAACAAAATGTCTCTCGATATGATATTGCTTTCA ATGCTGTTGTTTCTTTCTCAAGATAAAATTTTTATTTGTATTTTGTGTTTCTGCAACATAATTCACATTTCAACTTGCCT ATTAGTGTGTTTGGAAATGAGTTGTGTACACACCACAATGCACGTTTAGCTAAAAGCTACAACTTGGAACTTCAACTGGA TTCACTATTATGGCTTTCCAGACGTGCTTCTGAACAAGCAGCAAGTGATTAAGATTGAGTTCTGAATACAAATCAATAGT CATCCTCAAATTTTCTATGACTAGAAGAACCATCCGGTATAATTGTAGAGGACACTCATGAACCTGTCAGTATGGCTTCT CTCATTTGATACGCCATTTCCTTTTTCTTTTCTCGGTGTTAGCCAAAGTATTCCACAACCGATAACTATGAGACTAATCT ATCGTCTCACTGTCTGTGCACAAAAATGTATCTCGGGAATAAAGAGTTTTTGATTTGGCTTTGTAAATTAAAA
CDS sequence (LotjaGi1g1v0497200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATTCCACCACCCTCCACCCCAAATCCACCTCACGGATCCAACCAAAACCCATCAACCAAGGTAAGTCTTGCTC AGGTTTCCTCTTCAAAGTTCTATTCTTAGCACTGTTAGTCCTTGTTCTTCCACTGTTTCCTTCACAAGCTCCTGAATTTG TGAGCCAAACCGCGCTCACTAAGTTCTGGGAGCTTCTTCACCTTCTCTTCATTGGCATTGCTGTGACCTATGGTCTGTTT AGTAGAAGAAATGCAGAGTTAGATTCACATGTAGAAACCCACTCTAGTGATGGTAGTTCACCTAGTTATGTGTCTAAAAT GTTTCCGGGTTCCGCGCTTTTCGGTGATGGGGGTGAAAATTCATCTGGGTTTGATGAGAAGAGGGTGATGCATTGTTGGG ATCCTCCTCAGAACTATGATGGGGAGCAGCCAGGTGGGGTGTGTTCTAATGTTGGGGGTACTGTTGGTGTTTTTGATGAA CAGTACAAACCCCAATTGCCAATTCCTGAAGATAATTTTGGTTTTCCGTTTAGATATGATGGGAATGGGACCAATGTTGT TCAAGCTTGGAATTCTGAGTATTATCATAGTGAGCCAGTGGTGGTTGTTGCTCAACCATATGTCTCTGCTGGTGAATCTG GTGAGGTTGTTGGTCATAAACCACTAGGTTTACCGGTTCGCAGTTTGAGATCGGTTGCAAGAGAAGGGGATGGTCCTAAC TTCATCAATGAGAGTGATTCCAGTTCAGGTTCAAGGGCTTCATCTAAGAGCTCTGATAAGAGCAGAGGTAATAGGGAGTT TGGGGATCTTGGTCCTTCTAATCTGGAGAAACAATTTAATGATGCTGCTGCTGTTGGTGGATCAGCATCCCCGATTCCCT GGCGTTCGAGGGGTGGAAAGATGGAAAGGGAGAAAAGCTATGGCAATGTAACTCATCCTTCACATTTTAGGCCTCTTTCG TTTGATGAAGCAGTTGGTTCTTTACAGTCTACAACATCTTTCTCTCCCCACAGTAGTATGTATTCTTCCTTGGATTCGAT TTCATCAGATAAAATGAACGTTCAAGGGGAAGAAATGAGGCAAATGGAAGGTTACTATGTGCCTGCTTCAGAAAATATGA ATTTCCAAGAGAAAGATGTGGGAAGAAAGAAGACATCCTATGTGCCTCCCCCAGAAAGTATCAATTTCCAAGACGAAGAT ATGGAACGATGGAAGGCTTCCTATTTGCATGCTTCTGAGAAAATGAATTTCCTAGAGAAAGACATGGGAAGAAAGAAGGC TTCCTACGTGCCACCTCCAGAAATTATCAATTGCCAAGAGGAAGATATGGAACGAATGAAGACTTCCTATGTGCCCACTT TCGAAAAAATGAATTTCCTAGAGAAAGATAAAGGAAGAAAGAAGGCTTCCTATGTGCCTCGTCCAGAAAATATCAATTTC CGAGAGGAAGATATGGAACATAGGGAGACTTCTTTTGTGCCAGCTTCTGAAAATACTAATTTCCAAAAGATAGATATGGG AAGGAAGATTTCCCGAGGGCGAAATAGGAGGATATCTGCTAAAGGAAAATATGCTGATGTTTCTAATCCATCACATTTCA GGCCAATTTCAGTTGATGAAACTCAACTTGAAGCACTCAGCTCACAGTGTTTCCAGTCTATGGGATCTTTTTCTTCCCAA ATGAGAATGAATTCTTCCTTGGATTCAATTTCGCCGGATAATATGGACTTCCGAGAGGAAGATATGAGACAAAAGAAGAC TTCCCCTATGCATGCTTCAGAAGATATGAGTTTCCAGGCAGAAGAAGTGGGAGACAACAACACTTCCTATGTGCATGCTT CAGAAAATGTGAATTTCCAAGAGGAAGACATGGGACACAAGAAGAGTTCCTATGCGCATTCTTCAGAAAATGTAAATTTC CAAGAGGAAGATATGGGATACAAGAAGAGTTCCTATGTGCATTCTTCAGAAAATATGAATTTCCAAGGGGAAGATATGGG ACAAAAGAAGAGTTCCTTTGTGCATTCTTCAGAAAATGGGAATTTCCAAGAGGAAGATATGGGACACAAGAAGACTTCCT ATGTGGCTGCTTCTGAAAATGTGAATTTCCGGGAGGTGGATTTGGGAAAGAAGATTTCTCAGGTGTCTTCAATGAATCTA ATGATGGAAACTAAAGGAAAATATGCTGCTGTTTCTCATCCTTCACATTTCAGGCCGATATCTGGTGATGAAGCTCAATT TGAATCACTTGGCTCACGGTCTTTCCAATCTGTGGGATCTTTCTCATCTCAGACGAGTTCACGCTCTTCCTTAGACTCTG TATCATCAGAAAATATGAACTCGCCGAACGAAGATTTAGGGGAAAAGAAGAGCTTGCATGGGTCTTCTTCTTCTTCTTCA AGTTCACCATCACTTTTGGCTAGAAGGAATGGGGAAGCTTCATTGCAATCACTTCAAGATGGTACATATAAAATCAGTAG CATGCTCCATGATGATCTGAACTGTGGACTGAATGATGAATTGAGCGGCTCGAGCGGGACAGGAGGTGAGGATCGTCCCG CACACAAGAAGGAGTCAGGGAAGCATGCTTTCCAGTCAGATCCGGAAAAGCCGGCAAGGCTACCTAAAACTCCATCACGG GGGAAATCAGTAAGAACAAGAAGAGAGAGTGGGTCGACTTCAGGGACAATGAGAATAGGAGAAGTATCTACCAAGCAAAC TGATGAAAAGGTTGAAAAGAAGCCTTACAATGTTGATACAGTGTTGAAGAAAGATAGAATGAAAAGTGAAGAACCAGAAC TTCTATCCAAAGGAGTCAGTAAGAATTCTCTGGATTCCTATTCTTCTAAGCCTGAGGTTACACTTTCCAAACATATGAAG AGAGATAAACTAGAGCCATTCAAGAATGTACCTAAGGAAGACTCGGATGAAGATGATGGGGAGGTGTCTGAGTATGTCAA TGATTCAGGACTAGATTCTGAGGTGGATAGGAAAGCTAGTGAGTTTATAGCCAAGTTCAAAGCTCAGATCAGGTTTCAGA AAGTGGGATCAATTGAAAGCTCAAAGGATCAAAAGACCATTGGAAACAATGTTAGGTGA
Protein sequence (LotjaGi1g1v0497200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADSTTLHPKSTSRIQPKPINQGKSCSGFLFKVLFLALLVLVLPLFPSQAPEFVSQTALTKFWELLHLLFIGIAVTYGLF SRRNAELDSHVETHSSDGSSPSYVSKMFPGSALFGDGGENSSGFDEKRVMHCWDPPQNYDGEQPGGVCSNVGGTVGVFDE QYKPQLPIPEDNFGFPFRYDGNGTNVVQAWNSEYYHSEPVVVVAQPYVSAGESGEVVGHKPLGLPVRSLRSVAREGDGPN FINESDSSSGSRASSKSSDKSRGNREFGDLGPSNLEKQFNDAAAVGGSASPIPWRSRGGKMEREKSYGNVTHPSHFRPLS FDEAVGSLQSTTSFSPHSSMYSSLDSISSDKMNVQGEEMRQMEGYYVPASENMNFQEKDVGRKKTSYVPPPESINFQDED MERWKASYLHASEKMNFLEKDMGRKKASYVPPPEIINCQEEDMERMKTSYVPTFEKMNFLEKDKGRKKASYVPRPENINF REEDMEHRETSFVPASENTNFQKIDMGRKISRGRNRRISAKGKYADVSNPSHFRPISVDETQLEALSSQCFQSMGSFSSQ MRMNSSLDSISPDNMDFREEDMRQKKTSPMHASEDMSFQAEEVGDNNTSYVHASENVNFQEEDMGHKKSSYAHSSENVNF QEEDMGYKKSSYVHSSENMNFQGEDMGQKKSSFVHSSENGNFQEEDMGHKKTSYVAASENVNFREVDLGKKISQVSSMNL MMETKGKYAAVSHPSHFRPISGDEAQFESLGSRSFQSVGSFSSQTSSRSSLDSVSSENMNSPNEDLGEKKSLHGSSSSSS SSPSLLARRNGEASLQSLQDGTYKISSMLHDDLNCGLNDELSGSSGTGGEDRPAHKKESGKHAFQSDPEKPARLPKTPSR GKSVRTRRESGSTSGTMRIGEVSTKQTDEKVEKKPYNVDTVLKKDRMKSEEPELLSKGVSKNSLDSYSSKPEVTLSKHMK RDKLEPFKNVPKEDSDEDDGEVSEYVNDSGLDSEVDRKASEFIAKFKAQIRFQKVGSIESSKDQKTIGNNVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 424 | 424 | 2.4E-225 | – | |
Phobius | 1 | 28 | 28 | - | – | |
PANTHER | 1 | 424 | 424 | 2.4E-225 | – | |
TMHMM | 28 | 50 | 23 | - | – | |
Phobius | 29 | 46 | 18 | - | – | |
Phobius | 47 | 57 | 11 | - | – | |
Phobius | 58 | 80 | 23 | - | – | |
Phobius | 81 | 1032 | 952 | - | – | |
MobiDBLite | 234 | 316 | 83 | - | – | |
MobiDBLite | 241 | 257 | 17 | - | – | |
PANTHER | 512 | 685 | 174 | 2.4E-225 | – | |
PANTHER | 512 | 685 | 174 | 2.4E-225 | – | |
PANTHER | 662 | 1032 | 371 | 2.4E-225 | – | |
PANTHER | 662 | 1032 | 371 | 2.4E-225 | – | |
MobiDBLite | 758 | 818 | 61 | - | – | |
MobiDBLite | 758 | 782 | 25 | - | – | |
MobiDBLite | 792 | 818 | 27 | - | – | |
MobiDBLite | 833 | 991 | 159 | - | – | |
MobiDBLite | 850 | 887 | 38 | - | – | |
MobiDBLite | 888 | 902 | 15 | - | – | |
MobiDBLite | 903 | 935 | 33 | - | – | |
MobiDBLite | 939 | 953 | 15 | - | – | |
MobiDBLite | 954 | 975 | 22 | - | – | |
Pfam | 992 | 1022 | 31 | 1.8E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0497200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…