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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0497200 |
| Transcript ID | LotjaGi1g1v0497200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | CTP synthase; TAIR: AT3G60380.1 cotton fiber protein; Swiss-Prot: sp|Q9C0C2|TB182_HUMAN 182 kDa tankyrase-1-binding protein; TrEMBL-Plants: tr|A0A0B2QJT7|A0A0B2QJT7_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0497200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:101268230..101272222) extracted from Lotus japonicus Gifu genome v1.2.
GAAAAGAAGACAATTACCTTAATCTTTGTTCAAAAAGAAAAAGACAAGTAACTTAATTTTTTATCTTCCCAGTTTGTCCC TGTTACCAAGGATGCACTTTTCCTTGGCTTCAAATCAAAGTCTTCCTTTCTTCATTCCTCATCTCACTCCCACAAATCCC AACCCCACCACAGAAGAGGAGGAGGAGGAGGTTCATCAATGGCGGATTCCACCACCCTCCACCCCAAATCCACCTCACGG ATCCAACCAAAACCCATCAACCAAGGTAAGTCTTGCTCAGGTTTCCTCTTCAAAGTTCTATTCTTAGCACTGTTAGTCCT TGTTCTTCCACTGTTTCCTTCACAAGCTCCTGAATTTGTGAGCCAAACCGCGCTCACTAAGTTCTGGGAGCTTCTTCACC TTCTCTTCATTGGCATTGCTGTGACCTATGGTCTGTTTAGTAGAAGAAATGCAGAGTTAGATTCACATGTAGAAACCCAC TCTAGTGATGGTAGTTCACCTAGTTATGTGTCTAAAATGTTTCCGGGTTCCGCGCTTTTCGGTGATGGGGGTGAAAATTC ATCTGGGTTTGATGAGAAGAGGGTGATGCATTGTTGGGATCCTCCTCAGAACTATGATGGGGAGCAGCCAGGTGGGGTGT GTTCTAATGTTGGGGGTACTGTTGGTGTTTTTGATGAACAGTACAAACCCCAATTGCCAATTCCTGAAGATAATTTTGGT TTTCCGTTTAGATATGATGGGAATGGGACCAATGTTGTTCAAGCTTGGAATTCTGAGTATTATCATAGTGAGCCAGTGGT GGTTGTTGCTCAACCATATGTCTCTGCTGGTGAATCTGGTGAGGTTGTTGGTCATAAACCACTAGGTTTACCGGTTCGCA GTTTGAGATCGGTTGCAAGAGAAGGGGATGGTCCTAACTTCATCAATGAGAGTGATTCCAGTTCAGGTTCAAGGGCTTCA TCTAAGAGCTCTGATAAGAGCAGAGGTAATAGGGAGTTTGGGGATCTTGGTCCTTCTAATCTGGAGAAACAATTTAATGA TGCTGCTGCTGTTGGTGGATCAGCATCCCCGATTCCCTGGCGTTCGAGGGGTGGAAAGATGGAAAGGGAGAAAAGCTATG GCAATGTAACTCATCCTTCACATTTTAGGCCTCTTTCGTTTGATGAAGCAGTTGGTTCTTTACAGTCTACAACATCTTTC TCTCCCCACAGTAGTATGTATTCTTCCTTGGATTCGATTTCATCAGATAAAATGAACGTTCAAGGGGAAGAAATGAGGCA AATGGAAGGTTACTATGTGCCTGCTTCAGAAAATATGAATTTCCAAGAGAAAGATGTGGGAAGAAAGAAGACATCCTATG TGCCTCCCCCAGAAAGTATCAATTTCCAAGACGAAGATATGGAACGATGGAAGGCTTCCTATTTGCATGCTTCTGAGAAA ATGAATTTCCTAGAGAAAGACATGGGAAGAAAGAAGGCTTCCTACGTGCCACCTCCAGAAATTATCAATTGCCAAGAGGA AGATATGGAACGAATGAAGACTTCCTATGTGCCCACTTTCGAAAAAATGAATTTCCTAGAGAAAGATAAAGGAAGAAAGA AGGCTTCCTATGTGCCTCGTCCAGAAAATATCAATTTCCGAGAGGAAGATATGGAACATAGGGAGACTTCTTTTGTGCCA GCTTCTGAAAATACTAATTTCCAAAAGATAGATATGGGAAGGAAGATTTCCCGAGGGCGAAATAGGAGGATATCTGCTAA AGGAAAATATGCTGATGTTTCTAATCCATCACATTTCAGGCCAATTTCAGTTGATGAAACTCAACTTGAAGCACTCAGCT CACAGTGTTTCCAGTCTATGGGATCTTTTTCTTCCCAAATGAGAATGAATTCTTCCTTGGATTCAATTTCGCCGGATAAT ATGGACTTCCGAGAGGAAGATATGAGACAAAAGAAGACTTCCCCTATGCATGCTTCAGAAGATATGAGTTTCCAGGCAGA AGAAGTGGGAGACAACAACACTTCCTATGTGCATGCTTCAGAAAATGTGAATTTCCAAGAGGAAGACATGGGACACAAGA AGAGTTCCTATGCGCATTCTTCAGAAAATGTAAATTTCCAAGAGGAAGATATGGGATACAAGAAGAGTTCCTATGTGCAT TCTTCAGAAAATATGAATTTCCAAGGGGAAGATATGGGACAAAAGAAGAGTTCCTTTGTGCATTCTTCAGAAAATGGGAA TTTCCAAGAGGAAGATATGGGACACAAGAAGACTTCCTATGTGGCTGCTTCTGAAAATGTGAATTTCCGGGAGGTGGATT TGGGAAAGAAGATTTCTCAGGTGTCTTCAATGAATCTAATGATGGAAACTAAAGGAAAATATGCTGCTGTTTCTCATCCT TCACATTTCAGGCCGATATCTGGTGATGAAGCTCAATTTGAATCACTTGGCTCACGGTCTTTCCAATCTGTGGGATCTTT CTCATCTCAGACGAGTTCACGCTCTTCCTTAGACTCTGTATCATCAGAAAATATGAACTCGCCGAACGAAGATTTAGGGG AAAAGAAGAGCTTGCATGGGTCTTCTTCTTCTTCTTCAAGTTCACCATCACTTTTGGCTAGAAGGAATGGGGAAGCTTCA TTGCAATCACTTCAAGATGGTACATATAAAATCAGTAGCATGCTCCATGATGATCTGAACTGTGGACTGAATGATGAATT GAGCGGCTCGAGCGGGACAGGAGGTGAGGATCGTCCCGCACACAAGAAGGAGTCAGGGAAGCATGCTTTCCAGTCAGATC CGGAAAAGCCGGCAAGGCTACCTAAAACTCCATCACGGGGGAAATCAGTAAGAACAAGAAGAGAGAGTGGGTCGACTTCA GGGACAATGAGAATAGGAGAAGTATCTACCAAGCAAACTGATGAAAAGGTTGAAAAGAAGCCTTACAATGTTGATACAGT GTTGAAGAAAGATAGAATGAAAAGTGAAGAACCAGAACTTCTATCCAAAGGAGTCAGTAAGAATTCTCTGGATTCCTATT CTTCTAAGCCTGAGGTTACACTTTCCAAACATATGAAGAGAGATAAACTAGAGCCATTCAAGAATGTACCTAAGGAAGAC TCGGATGAAGATGATGGGGAGGTGTCTGAGTATGTCAATGATTCAGGACTAGATTCTGAGGTGGATAGGAAAGCTAGTGA GTTTATAGCCAAGTTCAAAGCTCAGATCAGGTTTCAGAAAGTGGGATCAATTGAAAGCTCAAAGGATCAAAAGACCATTG GAAACAATGTTAGGTGATTATTTGTAAACTATTGTACTATTTCTAACCAGATGAATATGAAGTTCATCAGAGATCTTATA ATTATTCTATTTCATTGAGCTTTCTTCATTTTAGGAGATTTGATTTCTTTTTATGCTTTGTATAACCGGTGAAGTTCAAA TTATTATTTTGTGGCAGCAGGTATTCCACTTATTTATCTTCACATACAACAAAATGTCTCTCGATATGATATTGCTTTCA ATGCTGTTGTTTCTTTCTCAAGATAAAATTTTTATTTGTATTTTGTGTTTCTGCAACATAATTCACATTTCAACTTGCCT ATTAGTGTGTTTGGAAATGAGTTGTGTACACACCACAATGCACGTTTAGCTAAAAGCTACAACTTGGAACTTCAACTGGA TTCACTATTATGGCTTTCCAGACGTGCTTCTGAACAAGCAGCAAGTGATTAAGATTGAGTTCTGAATACAAATCAATAGT CATCCTCAAATTTTCTATGACTAGAAGAACCATCCGGTATAATTGTAGAGGACACTCATGAACCTGTCAGTATGGCTTCT CTCATTTGATACGCCATTTCCTTTTTCTTTTCTCGGTGTTAGCCAAAGTATTCCACAACCGATAACTATGAGACTAATCT ATCGTCTCACTGTCTGTGCACAAAAATGTATCTCGGGAATAAAGAGTTTTTGATTTGGCTTTGTAAATTAAAA
CDS sequence (LotjaGi1g1v0497200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGATTCCACCACCCTCCACCCCAAATCCACCTCACGGATCCAACCAAAACCCATCAACCAAGGTAAGTCTTGCTC AGGTTTCCTCTTCAAAGTTCTATTCTTAGCACTGTTAGTCCTTGTTCTTCCACTGTTTCCTTCACAAGCTCCTGAATTTG TGAGCCAAACCGCGCTCACTAAGTTCTGGGAGCTTCTTCACCTTCTCTTCATTGGCATTGCTGTGACCTATGGTCTGTTT AGTAGAAGAAATGCAGAGTTAGATTCACATGTAGAAACCCACTCTAGTGATGGTAGTTCACCTAGTTATGTGTCTAAAAT GTTTCCGGGTTCCGCGCTTTTCGGTGATGGGGGTGAAAATTCATCTGGGTTTGATGAGAAGAGGGTGATGCATTGTTGGG ATCCTCCTCAGAACTATGATGGGGAGCAGCCAGGTGGGGTGTGTTCTAATGTTGGGGGTACTGTTGGTGTTTTTGATGAA CAGTACAAACCCCAATTGCCAATTCCTGAAGATAATTTTGGTTTTCCGTTTAGATATGATGGGAATGGGACCAATGTTGT TCAAGCTTGGAATTCTGAGTATTATCATAGTGAGCCAGTGGTGGTTGTTGCTCAACCATATGTCTCTGCTGGTGAATCTG GTGAGGTTGTTGGTCATAAACCACTAGGTTTACCGGTTCGCAGTTTGAGATCGGTTGCAAGAGAAGGGGATGGTCCTAAC TTCATCAATGAGAGTGATTCCAGTTCAGGTTCAAGGGCTTCATCTAAGAGCTCTGATAAGAGCAGAGGTAATAGGGAGTT TGGGGATCTTGGTCCTTCTAATCTGGAGAAACAATTTAATGATGCTGCTGCTGTTGGTGGATCAGCATCCCCGATTCCCT GGCGTTCGAGGGGTGGAAAGATGGAAAGGGAGAAAAGCTATGGCAATGTAACTCATCCTTCACATTTTAGGCCTCTTTCG TTTGATGAAGCAGTTGGTTCTTTACAGTCTACAACATCTTTCTCTCCCCACAGTAGTATGTATTCTTCCTTGGATTCGAT TTCATCAGATAAAATGAACGTTCAAGGGGAAGAAATGAGGCAAATGGAAGGTTACTATGTGCCTGCTTCAGAAAATATGA ATTTCCAAGAGAAAGATGTGGGAAGAAAGAAGACATCCTATGTGCCTCCCCCAGAAAGTATCAATTTCCAAGACGAAGAT ATGGAACGATGGAAGGCTTCCTATTTGCATGCTTCTGAGAAAATGAATTTCCTAGAGAAAGACATGGGAAGAAAGAAGGC TTCCTACGTGCCACCTCCAGAAATTATCAATTGCCAAGAGGAAGATATGGAACGAATGAAGACTTCCTATGTGCCCACTT TCGAAAAAATGAATTTCCTAGAGAAAGATAAAGGAAGAAAGAAGGCTTCCTATGTGCCTCGTCCAGAAAATATCAATTTC CGAGAGGAAGATATGGAACATAGGGAGACTTCTTTTGTGCCAGCTTCTGAAAATACTAATTTCCAAAAGATAGATATGGG AAGGAAGATTTCCCGAGGGCGAAATAGGAGGATATCTGCTAAAGGAAAATATGCTGATGTTTCTAATCCATCACATTTCA GGCCAATTTCAGTTGATGAAACTCAACTTGAAGCACTCAGCTCACAGTGTTTCCAGTCTATGGGATCTTTTTCTTCCCAA ATGAGAATGAATTCTTCCTTGGATTCAATTTCGCCGGATAATATGGACTTCCGAGAGGAAGATATGAGACAAAAGAAGAC TTCCCCTATGCATGCTTCAGAAGATATGAGTTTCCAGGCAGAAGAAGTGGGAGACAACAACACTTCCTATGTGCATGCTT CAGAAAATGTGAATTTCCAAGAGGAAGACATGGGACACAAGAAGAGTTCCTATGCGCATTCTTCAGAAAATGTAAATTTC CAAGAGGAAGATATGGGATACAAGAAGAGTTCCTATGTGCATTCTTCAGAAAATATGAATTTCCAAGGGGAAGATATGGG ACAAAAGAAGAGTTCCTTTGTGCATTCTTCAGAAAATGGGAATTTCCAAGAGGAAGATATGGGACACAAGAAGACTTCCT ATGTGGCTGCTTCTGAAAATGTGAATTTCCGGGAGGTGGATTTGGGAAAGAAGATTTCTCAGGTGTCTTCAATGAATCTA ATGATGGAAACTAAAGGAAAATATGCTGCTGTTTCTCATCCTTCACATTTCAGGCCGATATCTGGTGATGAAGCTCAATT TGAATCACTTGGCTCACGGTCTTTCCAATCTGTGGGATCTTTCTCATCTCAGACGAGTTCACGCTCTTCCTTAGACTCTG TATCATCAGAAAATATGAACTCGCCGAACGAAGATTTAGGGGAAAAGAAGAGCTTGCATGGGTCTTCTTCTTCTTCTTCA AGTTCACCATCACTTTTGGCTAGAAGGAATGGGGAAGCTTCATTGCAATCACTTCAAGATGGTACATATAAAATCAGTAG CATGCTCCATGATGATCTGAACTGTGGACTGAATGATGAATTGAGCGGCTCGAGCGGGACAGGAGGTGAGGATCGTCCCG CACACAAGAAGGAGTCAGGGAAGCATGCTTTCCAGTCAGATCCGGAAAAGCCGGCAAGGCTACCTAAAACTCCATCACGG GGGAAATCAGTAAGAACAAGAAGAGAGAGTGGGTCGACTTCAGGGACAATGAGAATAGGAGAAGTATCTACCAAGCAAAC TGATGAAAAGGTTGAAAAGAAGCCTTACAATGTTGATACAGTGTTGAAGAAAGATAGAATGAAAAGTGAAGAACCAGAAC TTCTATCCAAAGGAGTCAGTAAGAATTCTCTGGATTCCTATTCTTCTAAGCCTGAGGTTACACTTTCCAAACATATGAAG AGAGATAAACTAGAGCCATTCAAGAATGTACCTAAGGAAGACTCGGATGAAGATGATGGGGAGGTGTCTGAGTATGTCAA TGATTCAGGACTAGATTCTGAGGTGGATAGGAAAGCTAGTGAGTTTATAGCCAAGTTCAAAGCTCAGATCAGGTTTCAGA AAGTGGGATCAATTGAAAGCTCAAAGGATCAAAAGACCATTGGAAACAATGTTAGGTGA
Protein sequence (LotjaGi1g1v0497200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MADSTTLHPKSTSRIQPKPINQGKSCSGFLFKVLFLALLVLVLPLFPSQAPEFVSQTALTKFWELLHLLFIGIAVTYGLF SRRNAELDSHVETHSSDGSSPSYVSKMFPGSALFGDGGENSSGFDEKRVMHCWDPPQNYDGEQPGGVCSNVGGTVGVFDE QYKPQLPIPEDNFGFPFRYDGNGTNVVQAWNSEYYHSEPVVVVAQPYVSAGESGEVVGHKPLGLPVRSLRSVAREGDGPN FINESDSSSGSRASSKSSDKSRGNREFGDLGPSNLEKQFNDAAAVGGSASPIPWRSRGGKMEREKSYGNVTHPSHFRPLS FDEAVGSLQSTTSFSPHSSMYSSLDSISSDKMNVQGEEMRQMEGYYVPASENMNFQEKDVGRKKTSYVPPPESINFQDED MERWKASYLHASEKMNFLEKDMGRKKASYVPPPEIINCQEEDMERMKTSYVPTFEKMNFLEKDKGRKKASYVPRPENINF REEDMEHRETSFVPASENTNFQKIDMGRKISRGRNRRISAKGKYADVSNPSHFRPISVDETQLEALSSQCFQSMGSFSSQ MRMNSSLDSISPDNMDFREEDMRQKKTSPMHASEDMSFQAEEVGDNNTSYVHASENVNFQEEDMGHKKSSYAHSSENVNF QEEDMGYKKSSYVHSSENMNFQGEDMGQKKSSFVHSSENGNFQEEDMGHKKTSYVAASENVNFREVDLGKKISQVSSMNL MMETKGKYAAVSHPSHFRPISGDEAQFESLGSRSFQSVGSFSSQTSSRSSLDSVSSENMNSPNEDLGEKKSLHGSSSSSS SSPSLLARRNGEASLQSLQDGTYKISSMLHDDLNCGLNDELSGSSGTGGEDRPAHKKESGKHAFQSDPEKPARLPKTPSR GKSVRTRRESGSTSGTMRIGEVSTKQTDEKVEKKPYNVDTVLKKDRMKSEEPELLSKGVSKNSLDSYSSKPEVTLSKHMK RDKLEPFKNVPKEDSDEDDGEVSEYVNDSGLDSEVDRKASEFIAKFKAQIRFQKVGSIESSKDQKTIGNNVR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 424 | 424 | 2.4E-225 | – | |
| Phobius | 1 | 28 | 28 | - | – | |
| PANTHER | 1 | 424 | 424 | 2.4E-225 | – | |
| TMHMM | 28 | 50 | 23 | - | – | |
| Phobius | 29 | 46 | 18 | - | – | |
| Phobius | 47 | 57 | 11 | - | – | |
| Phobius | 58 | 80 | 23 | - | – | |
| Phobius | 81 | 1032 | 952 | - | – | |
| MobiDBLite | 234 | 316 | 83 | - | – | |
| MobiDBLite | 241 | 257 | 17 | - | – | |
| PANTHER | 512 | 685 | 174 | 2.4E-225 | – | |
| PANTHER | 512 | 685 | 174 | 2.4E-225 | – | |
| PANTHER | 662 | 1032 | 371 | 2.4E-225 | – | |
| PANTHER | 662 | 1032 | 371 | 2.4E-225 | – | |
| MobiDBLite | 758 | 818 | 61 | - | – | |
| MobiDBLite | 758 | 782 | 25 | - | – | |
| MobiDBLite | 792 | 818 | 27 | - | – | |
| MobiDBLite | 833 | 991 | 159 | - | – | |
| MobiDBLite | 850 | 887 | 38 | - | – | |
| MobiDBLite | 888 | 902 | 15 | - | – | |
| MobiDBLite | 903 | 935 | 33 | - | – | |
| MobiDBLite | 939 | 953 | 15 | - | – | |
| MobiDBLite | 954 | 975 | 22 | - | – | |
| Pfam | 992 | 1022 | 31 | 1.8E-8 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0497200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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