Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0503900 |
| Transcript ID | LotjaGi1g1v0503900.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein NRT1/ PTR FAMILY 5.1; TAIR: AT1G32450.1 nitrate transporter 1.5; Swiss-Prot: sp|Q9LQL2|PTR14_ARATH Protein NRT1/ PTR FAMILY 7.3; TrEMBL-Plants: tr|Q2HUR9|Q2HUR9_MEDTR Peptide/nitrate transporter; Found in the gene: LotjaGi1g1v0503900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:102166117..102170811) extracted from Lotus japonicus Gifu genome v1.2.
CTCAGTTCTCCCTTGCTACCATATTCAAGAAAAATATTCTTCTACTTACTTAGCCAATATTTCACATTTCCAACTTGCAA GGTTAATTGTGTTGTTTGTATTTTGTTAAGAAGGTTAGTTCCGTTTAAGTTCCAAATTTTTCAAATTATAGTGAGCTCTA AAAATGCTCCAATTAATTTTTTTCACTAGCCTAAGTAAGTTCTGCTTATGATTGCAATCAAATGGTAATAATGATTCTAA TATTTGATTTTTTATGACTAAATATATATTCATCAGGATAAAATGGAGGAAAAGGTGTACAAGGAGTGCACACAGGATGG AGCAATTGATAGCCATGGTCTTCCTGCAGACAGAAGGAGAACTGGAACTTGGGTGGCAGGAATTTTGATTTTAGGTATCA CCCACCTCTTCAACTAAAATTTAGTACAAGTTAAATTTATGATACATTCATGCTAAAATTAATTTGCTGAAAAACCATTT AAATTTGTGAATCGGAAATTTCTTATTCCATAGACAGGCCTACTATATATATTCTATCATATTTAAGGTTATTTTCATTT TTGTGAAACATATGTTATGAAACCTTGTATATATTAATTACAAATTTCACTGAGTAATGTGTTTTTGTCTCGTGGATGAT ACTATATTAGTGAACCAAGGACTTGCAACTTTGGCATTCTTTGGTGTGGGAGTGAATCTCGTGCTGTTTCTCACGAGAGT GATGGGTCAAGACAATGCTGATGCAGCCAACAATGTTAGCAAGTGGACAGGGACAGTTTACATCTTCTCTCTTCTTGGAG CCTTCGTTAGTGACTCTTACTTGGGGAGGTATATGACGTGTGCCATCTTCCAGGTCATTTTTGTTGTGGTAAGTTATTCA TTGGATAATGAATGTTGAGTTATGATTATTCATATTTTCAGTTCATAAAATATGTAAGTTAATTATGGTCTGATAAACAA ACACTATTCTAAAAATTAATAAAATTAATTGTATTTTCTTAATATGTGTATTTTTTTCTTTCTAGACAATTAATAAGGAG CAAATGAATTATTTTTTGGTTACAAGAGAAATGCTAAAAAGAACTAGAAACTACGCCGTTACGTCCAAACACAAGGAAGC TATGATGAACGATGGAGGATGCCGCCATATTCGGCGCAAGGAACAAATAAATTATTATATATTAAGAGTAAAAATGTTAT TTCACATAAAAATAATATTCTCTCTTCTCACTTTTTATTCAATAATTCAATGAGCTACAATGTTTAAGTATGAAAAACAC ATCAAATGTTTCCAATGCCTTAAATTGAAAAAATGTTTTGAAAAACACATCATTTTTCTGTCGCAAATTCGAGATTTTAT GTGGAAAACACAGTAGTTTACATCTTTATGTGTTCATGAGAATTAATGCTCTAAACCTGACAGGGCCTGGCGTCTTTATC ACTGACAACTTACTTATTCCTATTGGAGCCCAATGGCTGTGGTGATAAAGAATTACCCTGCACATCACATTCATCATACC AAACTGCTTTATTCTATGTCTCCATTTATCTAATAGCCCTAGGAAATGGAGGATACCAACCAAACATAGCTACATTTGGG GCTGATCAGTTTGATGAAGAGGATCCAAAAGAACAACACTCAAAAATATCATTTTTCAGCTATTTTTATTTGGCTTTGAA CCTTGGCTCACTCTTCTCAAACACCATATTGAATTACTTTGAGGATGATGGGTTATGGACTTTGGGGTTTTGGGCCTCAG CTGGCTCTGCCTTTTTGGCATTGGTTCTGTTTCTTTGTGGCACACCATGGTATAGATACTTTAAGCCTGGTGGGAACCCT GTTCCTAGATTTTGCCAAGTTTTTGTTGCTGCAATGAGAAAGTGGAAGGTGAAGGTGTCACCGGGTGAAGAAGATCAACT TCATGAAGTTGAAGAATGTTCAACCAATGGTGGGAGAAAAATGTTCCACACAGAAGGATTTAGGTATGTCTATATAATAA TCACAGTTTATATTTGGTCAAAGGTATGCATATCATTACATGTATTCATATGTTTGATAAATAGTTGGTCTTCCATGTCA TTATTTTTTGGGCAAATGGTCTTCCCAATGTAAATATATGAAGTTTGTTTCTTAAGGTTAATTCTTAAAGAACAAGCCTA GTAACATAAAAGTAACCAAACAAGCTCAGCTGAGACCCAAATAAACAAGCCCACCACACAAAAACTGTCTTTTTTTTATG TCTTTGAGAAAGAATTTTTGTTGTTGTTATGACATAAAAATTATAATAACAATTCTATAGTGAATCATGTTACAAAAAAG GTTGATCTATGAATTATGTTTTTACTAGTACATGTTATTTATAATATACTTCTTACGCGCTAAAATTAATTTGCAGATGA ACCCTTTTAACATGTGAATTGGGTTTTTCTTTAGTCCACGGTGCACAAAGAAAAATGAGTATTCACACCACTTGCCTAAA AGATTGATTCACTACTAGACCTACAGTTCATAATAATTATATAATTTGAGTTTGATAAGTGGACCTTTAAAAAACAGAGT TTGACTAGTGAGTTTTATTATTGACAATTACAATTAGCCAAGAAGCAGGGTTTAGTCACCTGATCATAGACCTTTCAGAT ATCACAATTAAATTATTTGAATTTAAATCATAAGTTATCTTGATAATCCGTCCATTGCAGAGAGTCTCCTTTCACTTTTG ATTGATTTTGTATAAATATACAATCAGAGAAGTCACTGATGGAAAATTTATACTGAATTGTTAGGTTCTTAGACAAAGCA GCACTTATCACATCACAGGAATCCAAACAAGAAAATGAATGCAGTCTTTGGCATCTCTCCACTGTGACACAAGTTGAGGA AGTGAAATGCATACTGAGACTACTCCCAATTTGGCTCTGCACCATACTGTTCTCAGTTGTTTTCAGCCAAATGGCATCAC TATTTGTGGAGCAAGGTGCTGCAATGGACACAAAAATTTCATCTTTCAACATTCCTCCCGCAAGCATGTCATGCTTTGAC ATCCTCAGTGTAGCTTCATGCATCTTCATCTACAGGAGAGTCCTTGATCCCCTTGTAGCCAAAACAATGAAATCCAAAGG AATCACACAGCTTCAGAGGATGGGAATTGGTCTAGTCCTTGCAATCATGGCCATGGTAGCAGCAGGATTGGTAGAGCAAT TCAGGTTGGAGTTTTGATGTTTTGTCGCATTTTCACTCACTTTTTATTTCTATCTCTCTTCTTTTCCGATCATATTGGAT TTATTGAGTATATTCAGTTAGAAGAAGTTAGTTTAGTTAGAATCGGTTAGTTAGCAGAATCATTTTTATTGGAGGGAAAG TTAGTATTTAACTCTTTAGCTCATACATTGTATATTCAGGGCGGAACCAGGCAAAATGAGTAAGGAGGCGAAACACACTA ACAAAATCAAGAATAACAAATTAAATAAGACAGTATAAAATTTGTAGGGAGGTGAAAATAACATTTGATTACTACTTTAT TAAGAACGTATTTTCAGAGAGCGATTGTCACATTTTAAATTCACGCAGGTACATATACTTTATGTATCAATTTGTGGAAT AGATTTTCACATTTCACTCATTCAATCACTCGCAATATGGTATTTGTTAGAAACTAAATATCAGATTCTAACTAAACTAA CTTCTGAATATATTCAATAAATCTGATATGTCATATCATATATCATATTACTCATTTATCTCTCTTTTATTCATATCCCT ACATTGGGTGTGCATGTATTTGGTTTGAACACATAATTTTCCTTCAGGTTGAAGCATGCAACAAGTGAAGAAGGGTCAAG TTCACTATCCATTTTCTGGCAAGTGCCACAATATGTGCTCATAGGAGCATCAGAGGTATTCATGTATGTGGGTCAATTGG AGTTCTTCAATGGGCAAGCACCTGATAGATTGAAGAGCTTTGGAAGTGCACTTTGCATGACATCAATTTCACTAGGAAAC TATGTCAGCAGTTTGCTTGTTGCAATTGTGATGAAGATCTCTGCCAGGGATGATGACATGCCCGGGTGGATCCCAGGGAA CCTGAACAAGGGACATTTGGACAGGTTTTACTTCCTATTAGCAGCACTAACAGCAGCTGATTTTGTCATTTATGTTGCTA TGGCTAGGTGGTATAAATATGTCAAATTTCAAGGAAACAATGATGAAGAAGACATCAACAAAGAAAACATTGAGCTTAAG GTGTAGACCTGTCACCTGTATCTTCGGCCGTTTGGGTCTAATCTCTTCTTTATCCCACCAATAGAATTTTGTCATGTCAT TTAAAAATCACATATGGAAAGTTATGAGTCATCCATATCATGTTTTAATTGACATACATAATTTTATTGATGAATCAATG AATGAAACATCAAACAGAGAGAAAAAAAAAGTCCAACATATGTACTCTTTGCTATGACACTAAACAAATTCATTCACCAA TTTTGTTTAGCAGAGCAAATGTGGTACAAATTGTACCCTGTTATAGAATTTCATCTAGTATATATATTTGATTTTCGCAT CATGGGTTTGGTCTCCCAAGATTTCGAACTCATCAATCTTTGTACTTGTATAACTTTATTTTTACAGAATGAGGCATTTA ATTGTTCATTTGTTGGAATATTTATGAGGAGGAATTTGATGTGTTAAAGACGCTG
CDS sequence (LotjaGi1g1v0503900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGAAAAGGTGTACAAGGAGTGCACACAGGATGGAGCAATTGATAGCCATGGTCTTCCTGCAGACAGAAGGAGAAC TGGAACTTGGGTGGCAGGAATTTTGATTTTAGTGAACCAAGGACTTGCAACTTTGGCATTCTTTGGTGTGGGAGTGAATC TCGTGCTGTTTCTCACGAGAGTGATGGGTCAAGACAATGCTGATGCAGCCAACAATGTTAGCAAGTGGACAGGGACAGTT TACATCTTCTCTCTTCTTGGAGCCTTCGTTAGTGACTCTTACTTGGGGAGGTATATGACGTGTGCCATCTTCCAGGTCAT TTTTGTTGTGGGCCTGGCGTCTTTATCACTGACAACTTACTTATTCCTATTGGAGCCCAATGGCTGTGGTGATAAAGAAT TACCCTGCACATCACATTCATCATACCAAACTGCTTTATTCTATGTCTCCATTTATCTAATAGCCCTAGGAAATGGAGGA TACCAACCAAACATAGCTACATTTGGGGCTGATCAGTTTGATGAAGAGGATCCAAAAGAACAACACTCAAAAATATCATT TTTCAGCTATTTTTATTTGGCTTTGAACCTTGGCTCACTCTTCTCAAACACCATATTGAATTACTTTGAGGATGATGGGT TATGGACTTTGGGGTTTTGGGCCTCAGCTGGCTCTGCCTTTTTGGCATTGGTTCTGTTTCTTTGTGGCACACCATGGTAT AGATACTTTAAGCCTGGTGGGAACCCTGTTCCTAGATTTTGCCAAGTTTTTGTTGCTGCAATGAGAAAGTGGAAGGTGAA GGTGTCACCGGGTGAAGAAGATCAACTTCATGAAGTTGAAGAATGTTCAACCAATGGTGGGAGAAAAATGTTCCACACAG AAGGATTTAGGTTCTTAGACAAAGCAGCACTTATCACATCACAGGAATCCAAACAAGAAAATGAATGCAGTCTTTGGCAT CTCTCCACTGTGACACAAGTTGAGGAAGTGAAATGCATACTGAGACTACTCCCAATTTGGCTCTGCACCATACTGTTCTC AGTTGTTTTCAGCCAAATGGCATCACTATTTGTGGAGCAAGGTGCTGCAATGGACACAAAAATTTCATCTTTCAACATTC CTCCCGCAAGCATGTCATGCTTTGACATCCTCAGTGTAGCTTCATGCATCTTCATCTACAGGAGAGTCCTTGATCCCCTT GTAGCCAAAACAATGAAATCCAAAGGAATCACACAGCTTCAGAGGATGGGAATTGGTCTAGTCCTTGCAATCATGGCCAT GGTAGCAGCAGGATTGGTAGAGCAATTCAGGTTGAAGCATGCAACAAGTGAAGAAGGGTCAAGTTCACTATCCATTTTCT GGCAAGTGCCACAATATGTGCTCATAGGAGCATCAGAGGTATTCATGTATGTGGGTCAATTGGAGTTCTTCAATGGGCAA GCACCTGATAGATTGAAGAGCTTTGGAAGTGCACTTTGCATGACATCAATTTCACTAGGAAACTATGTCAGCAGTTTGCT TGTTGCAATTGTGATGAAGATCTCTGCCAGGGATGATGACATGCCCGGGTGGATCCCAGGGAACCTGAACAAGGGACATT TGGACAGGTTTTACTTCCTATTAGCAGCACTAACAGCAGCTGATTTTGTCATTTATGTTGCTATGGCTAGGTGGTATAAA TATGTCAAATTTCAAGGAAACAATGATGAAGAAGACATCAACAAAGAAAACATTGAGCTTAAGGTGTAG
Protein sequence (LotjaGi1g1v0503900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEEKVYKECTQDGAIDSHGLPADRRRTGTWVAGILILVNQGLATLAFFGVGVNLVLFLTRVMGQDNADAANNVSKWTGTV YIFSLLGAFVSDSYLGRYMTCAIFQVIFVVGLASLSLTTYLFLLEPNGCGDKELPCTSHSSYQTALFYVSIYLIALGNGG YQPNIATFGADQFDEEDPKEQHSKISFFSYFYLALNLGSLFSNTILNYFEDDGLWTLGFWASAGSAFLALVLFLCGTPWY RYFKPGGNPVPRFCQVFVAAMRKWKVKVSPGEEDQLHEVEECSTNGGRKMFHTEGFRFLDKAALITSQESKQENECSLWH LSTVTQVEEVKCILRLLPIWLCTILFSVVFSQMASLFVEQGAAMDTKISSFNIPPASMSCFDILSVASCIFIYRRVLDPL VAKTMKSKGITQLQRMGIGLVLAIMAMVAAGLVEQFRLKHATSEEGSSSLSIFWQVPQYVLIGASEVFMYVGQLEFFNGQ APDRLKSFGSALCMTSISLGNYVSSLLVAIVMKISARDDDMPGWIPGNLNKGHLDRFYFLLAALTAADFVIYVAMARWYK YVKFQGNNDEEDINKENIELKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | - | – | |
| Gene3D | 2 | 568 | 567 | 1.3E-183 | – | |
| PANTHER | 6 | 573 | 568 | 0.0 | ||
| PANTHER | 6 | 573 | 568 | 0.0 | – | |
| SUPERFAMILY | 21 | 568 | 548 | 1.29E-23 | ||
| CDD | 30 | 558 | 529 | 0.0 | – | |
| Phobius | 30 | 58 | 29 | - | – | |
| TMHMM | 34 | 56 | 23 | - | – | |
| Phobius | 59 | 77 | 19 | - | – | |
| TMHMM | 76 | 95 | 20 | - | – | |
| Phobius | 78 | 95 | 18 | - | – | |
| Phobius | 96 | 101 | 6 | - | – | |
| Pfam | 98 | 516 | 419 | 5.8E-99 | ||
| Phobius | 102 | 122 | 21 | - | – | |
| TMHMM | 102 | 124 | 23 | - | – | |
| Phobius | 123 | 141 | 19 | - | – | |
| Phobius | 142 | 161 | 20 | - | – | |
| TMHMM | 144 | 166 | 23 | - | – | |
| Phobius | 162 | 186 | 25 | - | – | |
| Phobius | 187 | 209 | 23 | - | – | |
| TMHMM | 187 | 209 | 23 | - | – | |
| Phobius | 210 | 214 | 5 | - | – | |
| TMHMM | 214 | 236 | 23 | - | – | |
| Phobius | 215 | 235 | 21 | - | – | |
| Phobius | 236 | 331 | 96 | - | – | |
| Phobius | 332 | 353 | 22 | - | – | |
| TMHMM | 336 | 358 | 23 | - | – | |
| Phobius | 354 | 372 | 19 | - | – | |
| Phobius | 373 | 393 | 21 | - | – | |
| TMHMM | 373 | 395 | 23 | - | – | |
| Phobius | 394 | 412 | 19 | - | – | |
| Phobius | 413 | 432 | 20 | - | – | |
| TMHMM | 416 | 433 | 18 | - | – | |
| Phobius | 433 | 451 | 19 | - | – | |
| Phobius | 452 | 471 | 20 | - | – | |
| Phobius | 472 | 491 | 20 | - | – | |
| TMHMM | 488 | 510 | 23 | - | – | |
| Phobius | 492 | 516 | 25 | - | – | |
| Phobius | 517 | 535 | 19 | - | – | |
| Phobius | 536 | 555 | 20 | - | – | |
| TMHMM | 537 | 559 | 23 | - | – | |
| Phobius | 556 | 582 | 27 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0503900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…