Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi1g1v0528100 |
Transcript ID | LotjaGi1g1v0528100.3 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Heat shock 70 kDa protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|K7L2A2|K7L2A2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0528100 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:105494387..105496837) extracted from Lotus japonicus Gifu genome v1.2.
AAACAAACAAGATTCTGCCCTGGTTCTCATTAAAATAAACTGAACTTAAGTTTTGTTTTTCACCATTCTATTCTTGCCAA ACCTCAACAACGTTTCTTGTGTTAGATTGAAAGAAAGCATGGCCAAAAATGGTGAGGGATGTGCCATAGGAATTGACCTA GGCACCACTTACTCGTGTGTTGCTGTTTGGAAGGAGACCGAAGACAGAATAGAGATTATTCAGAATGAACAAGGCAACAA AATTACTCCCTCCTTTGTTGCTTTCACTGATGATCAAAGGTTGATTGGTGATGCAGCTAAGAATCAGGCTGCTACAAACC CTGAGAACACTGTCTTTGGTGAAATTTTCAACTTTTATTACTACCCTCATTTAAATGTTTACATTAAGCAGGTCAAATGA TAAATAGTTGATAATTGTTATTATTTGTGCAGATGCTAAGAGGTTGATAGGTAGGAAGCATAGTGATCCCATTATAAAAA ATGATATGATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAGCCCATGATTGTCGTCAAGTATCATGGTAAG GAGAAGCATCTTTTTGTTGAGGAAATATCATCCATGGTTCTCACAAAGATGCGAGAGATTGCAGAGGCATATCTGGAGTC ACCTGTTAAGAATGCAGTTATCACCGTGCCGGCTTATTTTAATGACTCTCAGCGCAAAGCCACCATAGATGCTGGCACCA TTGCAGGTCTAAATGTTATGCGGATAATCAATGAACCCACAGCTGCAGCTATTGCATATGGCCTGGAAAAGAGAACTAAT TGTGAGGAAGAGCGAAGTATATTCATCTTTGACCTTGGTGGTGGTACTTTTGATGTGTCTCTCCTTACAATTAAAGGTAA GGACTTCAAAGTTCAAGCTACTGCTGGAAATACTCACCTAGGAGGAGAGGACTTTGATAACAGAATGGTGGAATACTTTG TAGAGGAGTTCAAAAGGAAGAGCAAATTGGATATTGCTGGAAATTCTAAAGCCCTGAGGAGGTTGAGAAGTGCTTGCGAG AGGGCAAAAAGGACACTCTCATGGACTACATGTACCACAGTGGAGGTAGATTCTTTATTTCAAGGCATTGATTTCTGTTT CTCAATCACTCGTGCAAGGTTTGAGGAACTTAACATGAACATGTTTAGAGAATGTATAGAAACAGTGGATAAGTGCCTCA ACGATGCTAAGATGGACAAGAGTAGTGTACATGATGTTGTCCTTGTTGGTGGATCTTCTAGAATTCCAAAAGTGCAGGAG TTATTGCAGGATTTTTTCAAGGGGAAGGATCTGTGCAAGAGCATCAACCCTGATGAGGCTGTTGCTTATGGTGCTGCTGT TCAGGCTGCTTTGCTGAGTGGAGGCATAAAGAACGTTCCAAACTTGGTGTTGTCGGATGTTACACCGCTGTCTCTTGGTA TATTAGTCCAAGTAGATATCATGAGTGTAGTGATTCCTAGGAATACTACTACTCCTGTAAAGAAGACAGAGGGTTACACA ACAGATAGAGATAACCTATCCCGTGTCTTGATTGAGGTTTATGAGGGTGAGAGAGCAAGAGCCAGTGATAACAGTTTGCT GGGTTCCTTTGTTCTTTCGGGCATTCCTCCTACTCCTCGTGGCCATCCTCTTGATGTATGCTTTGCTATTGATGAAAATG GCATTTTATCTGTTTCCGCTAAGGAAAAAACCAATGGCAGTAAGAATGAGATCACCATAACCAATGACAAAGGGAGGCTC TCGACTGAAGAAATTAAAAGATTGATACAAGAAGCTCAGAGATTCCAGGCTGAAGACAAGAAATTCCTTAGGAAGGCCAA TGCAATGAATTCTTTGGATGATTACATTTACAAGATGAAGAAATCTTTGAAGAATGATTATATTAATTCAAAGCTTAGCT CAGAAGAAAAGGAGAAGATCAGTTCCGCAATCACAAAGGCCACAAATTTGCTTGATGCTGGTAATAATAAGCCAGTTGAA ATAGAGGTGCTTGAGGATTATGTGAAGGAGCTTGAGAGCATGTTCAAACCCATTGTAGGCAAGATTGACTTGCTCTTTGC ATTTTATTAGAGTTTTGCTTGTACTGACTAGTCATTTTGTCTTTGATAGCAAAAACGTTTACTCTAATATTATTAGGAAA TAGTTTAAGTTTATTTAAATTTTCAGTGGTTTGTTTAAATTGTTACCATTTTTTACTTAATGCGTCTTCAGGAATGCGTT TTCTAATCCCGTTTAAATTGAAAATCAATTATGAGAGAATCTGATGTGGGTAGTTTCTGTGTTGCTAGAAGTCAATTAAA GGGAAAAGTTGAGTCAGACTTACTAAGTCACTCAACATGTTTTCTCAATTGATCTCCTAACTCTTACTCTTACTATAAAT GTCACTTGTTCTCCAGGGTATTTGTGTTATATTGTTGTATGCTTAGGTTAT
CDS sequence (LotjaGi1g1v0528100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCAAAAATGGTGAGGGATGTGCCATAGGAATTGACCTAGGCACCACTTACTCGTGTGTTGCTGTTTGGAAGGAGAC CGAAGACAGAATAGAGATTATTCAGAATGAACAAGGCAACAAAATTACTCCCTCCTTTGTTGCTTTCACTGATGATCAAA GGTTGATTGGTGATGCAGCTAAGAATCAGGCTGCTACAAACCCTGAGAACACTGTCTTTGATGCTAAGAGGTTGATAGGT AGGAAGCATAGTGATCCCATTATAAAAAATGATATGATGTTATGGCCATTCAAGGTTATTGCGGGTGTTGATGACAAGCC CATGATTGTCGTCAAGTATCATGGTAAGGAGAAGCATCTTTTTGTTGAGGAAATATCATCCATGGTTCTCACAAAGATGC GAGAGATTGCAGAGGCATATCTGGAGTCACCTGTTAAGAATGCAGTTATCACCGTGCCGGCTTATTTTAATGACTCTCAG CGCAAAGCCACCATAGATGCTGGCACCATTGCAGGTCTAAATGTTATGCGGATAATCAATGAACCCACAGCTGCAGCTAT TGCATATGGCCTGGAAAAGAGAACTAATTGTGAGGAAGAGCGAAGTATATTCATCTTTGACCTTGGTGGTGGTACTTTTG ATGTGTCTCTCCTTACAATTAAAGGTAAGGACTTCAAAGTTCAAGCTACTGCTGGAAATACTCACCTAGGAGGAGAGGAC TTTGATAACAGAATGGTGGAATACTTTGTAGAGGAGTTCAAAAGGAAGAGCAAATTGGATATTGCTGGAAATTCTAAAGC CCTGAGGAGGTTGAGAAGTGCTTGCGAGAGGGCAAAAAGGACACTCTCATGGACTACATGTACCACAGTGGAGGTAGATT CTTTATTTCAAGGCATTGATTTCTGTTTCTCAATCACTCGTGCAAGGTTTGAGGAACTTAACATGAACATGTTTAGAGAA TGTATAGAAACAGTGGATAAGTGCCTCAACGATGCTAAGATGGACAAGAGTAGTGTACATGATGTTGTCCTTGTTGGTGG ATCTTCTAGAATTCCAAAAGTGCAGGAGTTATTGCAGGATTTTTTCAAGGGGAAGGATCTGTGCAAGAGCATCAACCCTG ATGAGGCTGTTGCTTATGGTGCTGCTGTTCAGGCTGCTTTGCTGAGTGGAGGCATAAAGAACGTTCCAAACTTGGTGTTG TCGGATGTTACACCGCTGTCTCTTGGTATATTAGTCCAAGTAGATATCATGAGTGTAGTGATTCCTAGGAATACTACTAC TCCTGTAAAGAAGACAGAGGGTTACACAACAGATAGAGATAACCTATCCCGTGTCTTGATTGAGGTTTATGAGGGTGAGA GAGCAAGAGCCAGTGATAACAGTTTGCTGGGTTCCTTTGTTCTTTCGGGCATTCCTCCTACTCCTCGTGGCCATCCTCTT GATGTATGCTTTGCTATTGATGAAAATGGCATTTTATCTGTTTCCGCTAAGGAAAAAACCAATGGCAGTAAGAATGAGAT CACCATAACCAATGACAAAGGGAGGCTCTCGACTGAAGAAATTAAAAGATTGATACAAGAAGCTCAGAGATTCCAGGCTG AAGACAAGAAATTCCTTAGGAAGGCCAATGCAATGAATTCTTTGGATGATTACATTTACAAGATGAAGAAATCTTTGAAG AATGATTATATTAATTCAAAGCTTAGCTCAGAAGAAAAGGAGAAGATCAGTTCCGCAATCACAAAGGCCACAAATTTGCT TGATGCTGGTAATAATAAGCCAGTTGAAATAGAGGTGCTTGAGGATTATGTGAAGGAGCTTGAGAGCATGTTCAAACCCA TTGTAGGCAAGATTGACTTGCTCTTTGCATTTTATTAG
Protein sequence (LotjaGi1g1v0528100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKNGEGCAIGIDLGTTYSCVAVWKETEDRIEIIQNEQGNKITPSFVAFTDDQRLIGDAAKNQAATNPENTVFDAKRLIG RKHSDPIIKNDMMLWPFKVIAGVDDKPMIVVKYHGKEKHLFVEEISSMVLTKMREIAEAYLESPVKNAVITVPAYFNDSQ RKATIDAGTIAGLNVMRIINEPTAAAIAYGLEKRTNCEEERSIFIFDLGGGTFDVSLLTIKGKDFKVQATAGNTHLGGED FDNRMVEYFVEEFKRKSKLDIAGNSKALRRLRSACERAKRTLSWTTCTTVEVDSLFQGIDFCFSITRARFEELNMNMFRE CIETVDKCLNDAKMDKSSVHDVVLVGGSSRIPKVQELLQDFFKGKDLCKSINPDEAVAYGAAVQAALLSGGIKNVPNLVL SDVTPLSLGILVQVDIMSVVIPRNTTTPVKKTEGYTTDRDNLSRVLIEVYEGERARASDNSLLGSFVLSGIPPTPRGHPL DVCFAIDENGILSVSAKEKTNGSKNEITITNDKGRLSTEEIKRLIQEAQRFQAEDKKFLRKANAMNSLDDYIYKMKKSLK NDYINSKLSSEEKEKISSAITKATNLLDAGNNKPVEIEVLEDYVKELESMFKPIVGKIDLLFAFY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 6 | 618 | 613 | 1.0E-291 | – | |
PANTHER | 6 | 618 | 613 | 1.0E-291 | ||
SUPERFAMILY | 8 | 193 | 186 | 9.85E-67 | ||
PRINTS | 8 | 21 | 14 | 1.6E-67 | – | |
Pfam | 9 | 617 | 609 | 2.5E-221 | ||
Gene3D | 10 | 385 | 376 | 1.3E-162 | – | |
ProSitePatterns | 12 | 19 | 8 | - | ||
PRINTS | 38 | 50 | 13 | 1.6E-67 | – | |
PRINTS | 60 | 68 | 9 | 1.6E-67 | – | |
Gene3D | 73 | 128 | 56 | 1.3E-162 | – | |
PRINTS | 148 | 168 | 21 | 1.6E-67 | – | |
Gene3D | 194 | 368 | 175 | 1.3E-162 | – | |
SUPERFAMILY | 198 | 390 | 193 | 4.13E-61 | ||
ProSitePatterns | 205 | 218 | 14 | - | ||
PRINTS | 211 | 221 | 11 | 1.6E-67 | – | |
Gene3D | 237 | 320 | 84 | 1.3E-162 | – | |
PRINTS | 339 | 355 | 17 | 1.6E-67 | – | |
ProSitePatterns | 342 | 356 | 15 | - | ||
PRINTS | 371 | 391 | 21 | 1.6E-67 | – | |
Gene3D | 391 | 515 | 125 | 8.2E-46 | ||
SUPERFAMILY | 394 | 549 | 156 | 4.58E-47 | ||
PRINTS | 397 | 416 | 20 | 1.6E-67 | – | |
PRINTS | 477 | 493 | 17 | 1.6E-67 | – | |
Gene3D | 516 | 619 | 104 | 4.2E-24 | ||
SUPERFAMILY | 544 | 618 | 75 | 7.59E-14 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0528100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…