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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0535700 |
| Transcript ID | LotjaGi1g1v0535700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 70 kDa heat shock protein; TAIR: AT3G12580.1 heat shock protein 70; Swiss-Prot: sp|P09189|HSP7C_PETHY Heat shock cognate 70 kDa protein; TrEMBL-Plants: tr|A0A0B2PXN5|A0A0B2PXN5_GLYSO Heat shock cognate 70 kDa protein; Found in the gene: LotjaGi1g1v0535700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:106420594..106424045) extracted from Lotus japonicus Gifu genome v1.2.
GTTACTTCCCCATCTCTCTCCTATCTCTCTCTTGCATCTCTCTCTTCTATCTCTCTCCTAACAAACAAAGCATAAAAGAG AAAGTACATCACAGCTTCCTTTCAATCCATAAAATTATAGGTAAAACAAGTCAAGGTCATCTGTGACTGCGTGTGTACCT TAAGAAGCACTTTGTTCACTCATCTTTGCATTGACCTTAAAAAGACTTGGTTCTCAATTCTCATCGTTACATTACATCTT GTCCTTCTCCAAAGACTTTATTGACCTGACTCTGCAAGCTAGAGAGAAATGGCTGCAAATGGTGAGAGAGTGGCAATAGG AATCGATCTAGGCACCACCTACTCGTGCGTTGCAGTGTGGAGGAACGATCAGGTTGAGGTCATTGTGAATGACCAAGGGA ACAGAACAACACCCTCTTATGTTTCCTTCACCCAGAACCAAAGGATGATTGGTGATGCTGCTCTCAATAATGCTTCTACC AACCCAATCAACTCTGTCTTTGGTAAAATATCTTTATCTACATACTTTGCTTTTATATATGTATGATAGTAGCTAGGTTC TACAAAATATTATTGATTCATAAATAAATAAGACCTGCTTAATAAGACCTGTTTCCTATTTTAGAAACCAAACCATGATA CTAAAAACTATTCTTAAAACATCATGGTACTAAGAATCTGTTCTCTTATTTTCCTTTTTATCAGCATGCTTAGTGCTAGA TGTTTGTTCTGTTAGAAATATATTATCAAAACATTCATGTCTCTTCATCTAATAGTTTAAACTTTTGGGATAATTGATTC ATAACATGATATCAAAGTCTCCATAGCCATGTGATAGAGTGTGATCCTTATAGCTCCAGAAATCTACTAAAAACTTGAAT TTCATCCCAAGGTAGGTGAGTCTATGCATTATCCACACTTCAAAACATGTTATTATTTTGTATGCAGATGCAAAGCGGTT GATTGGTAGGAAATTCAGTGACCCCATGGTTCAAAGTGATAAGAAGCTGTGGCCATTCAAAGTTATTGCTGATGATAATG ACAAACCAATCATTGTTGTTAATCACAATCACAAGGAAAAACGTTTTCCTGCTGAGGCAATCTCATCCATGGTCTTGGAA AAGATGCGTGAGATTTCTGAGGCTTACCTTGGATCAAAAGTGAAGGATGCTGTTATCACTGTGCCTGCTTACTTCAATGA GTCTCAGCGCCAAGCTACCAAAGATGCAGGTGCTATTGCAGGCCTCAATGTTATGCGAATAATCAATGAGCCTAGTGCTG CAGCGATTGCATATGGCGTTGACATGAAAGCTTGCATTCGTGGAAGGAGAAACGTTTTCATCTTTGATCTTGGTGGTGGT ACTTTGGATGTGTCTCTTCTCACGTTTGAGATGGAAGATATCCAAGTTAAGACCATTGCTGGAGACACTCACCTTGGGGG AGAGGACTTTGATAATAGAATGGTGGACTATTTTGTGAAGGAATTCCAAAGAAAGAACAAAATGGACATCAGAGGAGACC CAAGAGCCCTTAGGAGGTTGAGATTTGCTTGTGAGAAAGCAAAGAGGACGCTCTCATGCAACACTCTGGCCACCATTGAG TTAGATTTCTTATATCAAGGTATTGATTTCTACTCATCAATAACTCGTGCAAAGTTTGAGGAACTCAACAAAGATTACTT TCAAAAGTGTATGGAGCTTGTGGAAAAGTGTGTAATAGATTCAAAGATGGACAAGAGCAATATTCATGATGTTGTCCTGG TTGGCGGCTCTTCTAGGATTCCTAAAGTGAGACAGCTACTGATGGACTTCTTTGGTAGGAAGGATCTATGCAATAGAATC AATCCTGATGAGGCTGTTGCGCATGGTGCTGCTGTTCATGCTTCTATATTGAGCGGTGAGTTCAGTGAGAAGGTTCAAAG CTTGTTATTGAGGGAAGTCACCCCTCTGTCCCTCGGGCTAGAGAAGCATGGGGGTATCATGGAAACAATAATTCCAAGGA ATACCATGATTCCTACAACCATGGACCATGTATTCACTACACATTTTCATAACCAAACCAATATCTTGATTCATGTTTAT GAGGGTGAGAGGCAAACAACTAGACACAACAACTTGCTAGGTAAGTTTGTACTGGAAATTCCTCCATATCCTCGAGGTGT TCCTCAAATCAAAGTATGCTTCCAAATTGATGAAGAAGGTATCTTACATGTCTCTGTCAAGGAAAAATCCAATAGAATTA ACATGAAGGTTACAATAATAAATGACAAGGGAAGGTTGTCAAGGGCTGAAATCGAGAGGATGGTCAGAGAAAATGAGAAG AACAAGGCTGAAGATGAGAGGTACAAGAAGAAGGTAGAAGCAAAGAATGCATTGGAGAACTATGCATACAACATGAGGAA TGCCATAAATGACGAGGACATTAGTTCGAAGCTTTCCCTAGAAGACAAGCAAAAGATCAATGATGCAATTGATTTGGTCT TGAAATGGCTTGGTATCAATGATGCTGCAGAACAAGATGATTTTGAGCGTTATAGTAAAGATCTTTCGAAGGCCTTTGAT CCAATTATGTTGAAGATGATAAAGGATCTTTCCCCAACAGATAATGATGTGACGCCAAGTACTGTTGGAAATGATAAAAT GAAACGCTGGTTACAAATATTGGCAAAGCATACTCTCCAGGCAGTGTATTCAACTCTTACTGGTGACATTATTGGGTTTG TTTGTACTGTGATTGGTGATATTCTGCCCTAGTAATTAGAGTTAAAACATGATAAAATTTAAATAGACCAAATTGTATCG TGGTTTGAACTTGTATCTTATAGTTTGAGGAAAAACCAAAATGTAATGAGAAGTGTAGCAGCTTGTTATCAAAGCAGTAA ATTTCATGTTGCAAGTGACAATTTCAACTGTTAAAAACAAAATGTTTGACTTGTTATCAATGAGTTATGCACACACTTTA AGACACGTTTGGGTAGAAGCTATAACTCCATATCATGTTTGGCTCTATGGTTGAATGCTTTCTAATCTTGCATCACTTCT TTCTTTTTTTTAAGATAAAGAATCACTTCTGGTTAGAAGCTACAAGTCTTATCTTTTGAGTATTTTGTACAAACCAGACA TGCACTTGAAAAGTGTAAAGCTACTAATTTGCTTGACGGTGCCCTGTTGGGGGAGACAGGGGAGCCCATGGGCCGAGGAG CAAGACACCAAGAGATATCAACGCCACATCTTAACCCAAAACCTTAAGGCATTAGGTTTATGGGTCACATCTCTTATAAA CTCTTCTCCTCACCCACACTTAACCAATGTGGGACTCCAACTCCGCACTTGAATTCTCAACAATCTCCCCCTCAAGTGCG AGTCACCTCCACATTATCATGACCCCCCTCTGCGGAAGCTTATCCACTCTTGCACCGCCGTTCACCTCACCGCGTCAACG GAACCCGCCGCC
CDS sequence (LotjaGi1g1v0535700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCAAAGTGATAAGAAGCTGTGGCCATTCAAAGTTATTGCTGATGATAATGACAAACCAATCATTGTTGTTAATCA CAATCACAAGGAAAAACGTTTTCCTGCTGAGGCAATCTCATCCATGGTCTTGGAAAAGATGCGTGAGATTTCTGAGGCTT ACCTTGGATCAAAAGTGAAGGATGCTGTTATCACTGTGCCTGCTTACTTCAATGAGTCTCAGCGCCAAGCTACCAAAGAT GCAGGTGCTATTGCAGGCCTCAATGTTATGCGAATAATCAATGAGCCTAGTGCTGCAGCGATTGCATATGGCGTTGACAT GAAAGCTTGCATTCGTGGAAGGAGAAACGTTTTCATCTTTGATCTTGGTGGTGGTACTTTGGATGTGTCTCTTCTCACGT TTGAGATGGAAGATATCCAAGTTAAGACCATTGCTGGAGACACTCACCTTGGGGGAGAGGACTTTGATAATAGAATGGTG GACTATTTTGTGAAGGAATTCCAAAGAAAGAACAAAATGGACATCAGAGGAGACCCAAGAGCCCTTAGGAGGTTGAGATT TGCTTGTGAGAAAGCAAAGAGGACGCTCTCATGCAACACTCTGGCCACCATTGAGTTAGATTTCTTATATCAAGGTATTG ATTTCTACTCATCAATAACTCGTGCAAAGTTTGAGGAACTCAACAAAGATTACTTTCAAAAGTGTATGGAGCTTGTGGAA AAGTGTGTAATAGATTCAAAGATGGACAAGAGCAATATTCATGATGTTGTCCTGGTTGGCGGCTCTTCTAGGATTCCTAA AGTGAGACAGCTACTGATGGACTTCTTTGGTAGGAAGGATCTATGCAATAGAATCAATCCTGATGAGGCTGTTGCGCATG GTGCTGCTGTTCATGCTTCTATATTGAGCGGTGAGTTCAGTGAGAAGGTTCAAAGCTTGTTATTGAGGGAAGTCACCCCT CTGTCCCTCGGGCTAGAGAAGCATGGGGGTATCATGGAAACAATAATTCCAAGGAATACCATGATTCCTACAACCATGGA CCATGTATTCACTACACATTTTCATAACCAAACCAATATCTTGATTCATGTTTATGAGGGTGAGAGGCAAACAACTAGAC ACAACAACTTGCTAGGTAAGTTTGTACTGGAAATTCCTCCATATCCTCGAGGTGTTCCTCAAATCAAAGTATGCTTCCAA ATTGATGAAGAAGGTATCTTACATGTCTCTGTCAAGGAAAAATCCAATAGAATTAACATGAAGGTTACAATAATAAATGA CAAGGGAAGGTTGTCAAGGGCTGAAATCGAGAGGATGGTCAGAGAAAATGAGAAGAACAAGGCTGAAGATGAGAGGTACA AGAAGAAGGTAGAAGCAAAGAATGCATTGGAGAACTATGCATACAACATGAGGAATGCCATAAATGACGAGGACATTAGT TCGAAGCTTTCCCTAGAAGACAAGCAAAAGATCAATGATGCAATTGATTTGGTCTTGAAATGGCTTGGTATCAATGATGC TGCAGAACAAGATGATTTTGAGCGTTATAGTAAAGATCTTTCGAAGGCCTTTGATCCAATTATGTTGAAGATGATAAAGG ATCTTTCCCCAACAGATAATGATGTGACGCCAAGTACTGTTGGAAATGATAAAATGAAACGCTGGTTACAAATATTGGCA AAGCATACTCTCCAGGCAGTGTATTCAACTCTTACTGGTGACATTATTGGGTTTGTTTGTACTGTGATTGGTGATATTCT GCCCTAG
Protein sequence (LotjaGi1g1v0535700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVQSDKKLWPFKVIADDNDKPIIVVNHNHKEKRFPAEAISSMVLEKMREISEAYLGSKVKDAVITVPAYFNESQRQATKD AGAIAGLNVMRIINEPSAAAIAYGVDMKACIRGRRNVFIFDLGGGTLDVSLLTFEMEDIQVKTIAGDTHLGGEDFDNRMV DYFVKEFQRKNKMDIRGDPRALRRLRFACEKAKRTLSCNTLATIELDFLYQGIDFYSSITRAKFEELNKDYFQKCMELVE KCVIDSKMDKSNIHDVVLVGGSSRIPKVRQLLMDFFGRKDLCNRINPDEAVAHGAAVHASILSGEFSEKVQSLLLREVTP LSLGLEKHGGIMETIIPRNTMIPTTMDHVFTTHFHNQTNILIHVYEGERQTTRHNNLLGKFVLEIPPYPRGVPQIKVCFQ IDEEGILHVSVKEKSNRINMKVTIINDKGRLSRAEIERMVRENEKNKAEDERYKKKVEAKNALENYAYNMRNAINDEDIS SKLSLEDKQKINDAIDLVLKWLGINDAAEQDDFERYSKDLSKAFDPIMLKMIKDLSPTDNDVTPSTVGNDKMKRWLQILA KHTLQAVYSTLTGDIIGFVCTVIGDILP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 544 | 544 | 7.4E-269 | ||
| PANTHER | 1 | 544 | 544 | 7.4E-269 | – | |
| SUPERFAMILY | 2 | 107 | 106 | 3.56E-32 | ||
| Gene3D | 2 | 42 | 41 | 1.6E-122 | – | |
| Pfam | 2 | 531 | 530 | 1.9E-180 | ||
| Gene3D | 43 | 299 | 257 | 1.6E-122 | – | |
| PRINTS | 62 | 82 | 21 | 4.2E-52 | – | |
| Gene3D | 108 | 282 | 175 | 1.6E-122 | – | |
| SUPERFAMILY | 113 | 304 | 192 | 1.84E-59 | ||
| ProSitePatterns | 119 | 132 | 14 | - | ||
| PRINTS | 125 | 135 | 11 | 4.2E-52 | – | |
| Gene3D | 151 | 234 | 84 | 1.6E-122 | – | |
| PRINTS | 253 | 269 | 17 | 4.2E-52 | – | |
| ProSitePatterns | 256 | 270 | 15 | - | ||
| PRINTS | 285 | 305 | 21 | 4.2E-52 | – | |
| Gene3D | 303 | 430 | 128 | 1.2E-45 | ||
| SUPERFAMILY | 308 | 464 | 157 | 3.14E-51 | ||
| PRINTS | 312 | 331 | 20 | 4.2E-52 | – | |
| PRINTS | 392 | 408 | 17 | 4.2E-52 | – | |
| Coils | 431 | 456 | 26 | - | – | |
| Gene3D | 431 | 533 | 103 | 1.8E-29 | ||
| SUPERFAMILY | 458 | 535 | 78 | 5.62E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0535700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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