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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0551800 |
| Transcript ID | LotjaGi1g1v0551800.5 |
| Related isoforms 6 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3 protein; TAIR: AT3G02520.1 general regulatory factor 7; Swiss-Prot: sp|Q9SP07|1433_LILLO 14-3-3-like protein; TrEMBL-Plants: tr|I3T321|I3T321_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0551800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:108313933..108315475) extracted from Lotus japonicus Gifu genome v1.2.
GATTCTTCGTCTCCCCGTGAGGAGAATGTTTACCTGGCCAAGTTGGCGGAGCAGGCAGAGCGGTATGAGGAGATGGTGGA GTTCATGGAGAAGGTTGCCAAGTCGGTGGACGCTGGGGAGTTGACGGTGGAGGAGAGGAACTTACTCTCTGTGGCGTACA AGAATGTGATTGGGGCGAGGAGGGCTTCCTGGAGGATCATCTCCTCCATTGAGCAGAAGGAGGAGAGCAGAGGGAATGAG GACCATGTCTCTGTTATCAAGGAGTACAGGGGAAAGATTGAGGCTGAGCTCAGCAAGATCTGTGATGGAATTTTGAATCT CCTTGAGTCCAATCTCATACCATCTGCTGCGGCCCCTGAGTCTAAGGTGTTTTACCTTAAAATGAAAGGTGACTACCACA GGTACCTTGCTGAGTTCAAGACTGGGGCAGAGAGAAAAGAAGCTGCAGAAAGTACTTTGTTAGCTTACAAATCAGCTCAG GTATACATATATTCTATAGCTGTATATACATCCTACATTCATCCATAGATAGATGCTTGTATAAGTAGTGGTTACTTTCG CTACACACGCTAAACTCAATTTGTGGTTAATTGATCCAGGATATTGCTCTTGCTGAACTTGCCCCCACCCACCCGATTAG GCTCGGTCTTGCACTCAACTTTTCTGTGTTCTACTATGAAATCCTTAACTCGCCAGATCGTGCTTGTAATCTTGCGAAGC AGGTATCTTTACTTGCTATCTGATATGAAGGCTTTTTTTTTAATTCCTGGCTGCTGTATCTTAATTGATCATCGAGGAAG AAATTATCTTTATGTGTGGCTGAGTATGGACCGTAGACCATAGTGGGAATCTGTTGTGTCCATCCACTTGCATCGAAAAG TTTGTTTTTGAACAGAACTATTGGAAATTGCTTATGGAGTCCCAATAAATATACGCTGGACTTTGCAGCCTAATCTATTA TATGAATTGAAGTTATATAATTTTATTAATTTTGTTCAGGAGAATTTTAGAATTTAATTCTTCTTTAAGAGATTGAACTT AGTACAGTGTAACTGATTTCAATCCCGTTCATTCCTTAAATCATATTACTATTTCTTTATTTGACATGACTAATGTATTC TGTACTTTACTTAGCATTTGGTACTTCATGTAATGATGGATCTAAAAGCTCCGTGATGGTTTATTTGTTTATTTCATCTA TGTGTTCTCTTCTGTTTAGTAACCTATGAAAAATGCTTTACTGTGGCAGGCATTTGATGAGGCGATTTCTGAGCTTGACA CATTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAGCTTCTCCGAGATAATCTGACTTTGTGGACGTCCGAC ATTACGGTATCTCTCTCTACCTTCCCTCGCATGTTGTGTACACATATACTAAATATCTCTTCTTTAACATTGTTGACGAA CCTTGATGGCTGAACAAAATTGAGTTCTTTCATGAGGAGAAAGTATAAACCCCCTTTTTTTAGTAATAGTAATGCTTGTC CCTTCGAAGAAAGTTTGAGATAA
CDS sequence (LotjaGi1g1v0551800.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGAGTTCATGGAGAAGGTTGCCAAGTCGGTGGACGCTGGGGAGTTGACGGTGGAGGAGAGGAACTTACTCTCTGT GGCGTACAAGAATGTGATTGGGGCGAGGAGGGCTTCCTGGAGGATCATCTCCTCCATTGAGCAGAAGGAGGAGAGCAGAG GGAATGAGGACCATGTCTCTGTTATCAAGGAGTACAGGGGAAAGATTGAGGCTGAGCTCAGCAAGATCTGTGATGGAATT TTGAATCTCCTTGAGTCCAATCTCATACCATCTGCTGCGGCCCCTGAGTCTAAGGTGTTTTACCTTAAAATGAAAGGTGA CTACCACAGGTACCTTGCTGAGTTCAAGACTGGGGCAGAGAGAAAAGAAGCTGCAGAAAGTACTTTGTTAGCTTACAAAT CAGCTCAGGATATTGCTCTTGCTGAACTTGCCCCCACCCACCCGATTAGGCTCGGTCTTGCACTCAACTTTTCTGTGTTC TACTATGAAATCCTTAACTCGCCAGATCGTGCTTGTAATCTTGCGAAGCAGGCATTTGATGAGGCGATTTCTGAGCTTGA CACATTGGGTGAAGAGTCATACAAGGACAGTACATTGATCATGCAGCTTCTCCGAGATAATCTGACTTTGTGGACGTCCG ACATTACGGAGAAAGTATAA
Protein sequence (LotjaGi1g1v0551800.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVEFMEKVAKSVDAGELTVEERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSVIKEYRGKIEAELSKICDGI LNLLESNLIPSAAAPESKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLLAYKSAQDIALAELAPTHPIRLGLALNFSVF YYEILNSPDRACNLAKQAFDEAISELDTLGEESYKDSTLIMQLLRDNLTLWTSDITEKV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 216 | 216 | 6.8E-142 | – | |
| SUPERFAMILY | 1 | 214 | 214 | 8.63E-96 | ||
| SMART | 1 | 219 | 219 | 2.3E-173 | ||
| Pfam | 1 | 212 | 212 | 6.3E-96 | ||
| Gene3D | 1 | 214 | 214 | 9.0E-118 | ||
| PIRSF | 1 | 219 | 219 | 2.0E-106 | ||
| PANTHER | 1 | 216 | 216 | 6.8E-142 | ||
| PRINTS | 16 | 45 | 30 | 5.5E-88 | ||
| ProSitePatterns | 22 | 32 | 11 | - | ||
| PRINTS | 65 | 89 | 25 | 5.5E-88 | ||
| PRINTS | 96 | 118 | 23 | 5.5E-88 | ||
| PRINTS | 131 | 157 | 27 | 5.5E-88 | ||
| PRINTS | 158 | 184 | 27 | 5.5E-88 | ||
| PRINTS | 185 | 214 | 30 | 5.5E-88 | ||
| ProSitePatterns | 194 | 213 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0551800.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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