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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0558800 |
| Transcript ID | LotjaGi1g1v0558800.1 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Kinase family protein; TAIR: AT4G35030.3 Protein kinase superfamily protein; Swiss-Prot: sp|Q8H1D6|RBK1_ARATH Receptor-like cytosolic serine/threonine-protein kinase RBK1; TrEMBL-Plants: tr|A0A1J7HV80|A0A1J7HV80_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0558800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:109100348..109105901) extracted from Lotus japonicus Gifu genome v1.2.
GCCTATTGTATTGGACATACCTTCAACTACAATTAACAAATTCCAAATTAGGTTGTACCTAACACGATGAGGTGGAGCAT ATGATCTCACGTTGAATTTGTGGGACCCTAGAAGGATGAATAAGAGATTTTAGACTTGGATTGTTACATGGTTGCCATAA TTTTTGTTTTATGTATTGAAAGCGCGCATATTACGTACAAAATCACGTTGATTTACAAACCAATGGACCTCTGTAGCTCA CACATCGCACACAATAATGGAAGCATAGTGATAATTAATTTGTTGCATCACTGCAAATATTTTCAAGTGTTACGGGTATG ATTATGATGTTATTATTATTATAATTAATAAAAAAATAAAAATCCCAACGATAGTTGTTTTGATTTATGAGGAAATTTGA AAAACATGATACGGGCTTTTCAGTAACGAGAGGTGAAAATTTGGAGTTTGATAAGTCCTCCTCCGACATGAAGGGATTCC CATGAAAAACATACGGCTCTTGTCCCTCAAATTTCGCGGCAACTTCTTCTCTTCTCTTCAATCTCATCATCAACATCAAC ATCAATGTATTCTTCTTCTTCTTCTTCTTCTTCTTCCCTGCAATCTTGTTAGTGCTAGTAGTAGGTACATATACATGCTA ATGCAAATTGGCGCCAACTTCGTTTGAAAACTCTCAACCACAGCGTTCGTTCGTTTAGGTTCATATATTTCTTCTCTAGT CATTCGTCTGTCTTCACCTGTTTATCGGTTTGCTTCAATTCAACATTCTTTTTTTATTATTATTATAATACAATCGTCTT TTATTTACTTTCTTTGTCTGTCACCATTCCAATGGGTCATGTGACAGACTAACTCATTCGTGACTTTGTTTATGGGACTT TGCTTTGCTTTATGGATGCTATTTATATACATGATCGAATACTAGTTAATATTTCAATTCAACTCTAATGATCTGAACCA TCCTTGGTAGTTTTGTTTTGCAGAGAATGAGTGAGATTGATTGATATAATAGATTAGAGGCAGAACAAACGCTATGACTG TTGAGAGGAGATTTATTGTGGTGGGAATTAGAATTGATAGCCATAGCAGGCAACTGCTCAACTGGGCTCTTGTCAAAGTT GCTCACCCTGGGGATTCTGTTATTGCTCTCCATGTAGTTACTAATTCCGGTAACCAATTTCATTCACAACTTCACTCATG TTAGTGTTACTATGTATGCACTTTTTTTCTCAAACATATACACAATTACTTGTTGTCTTGTGTTTCTTTATTTAACTTGA ATACAGATTATATTTCCAAAAGCAAGCCCTTAATTGATGATTACTTACGAGTTTATCAAGGGTTATGTGATGTCAGAAAG GTAAGTGTACATAATACTATACTATAAAACACCTACCTCACTGTCACTTTGTTATTCATAGGATTCAATATTCAAATTCA GGTAGGTCTCTCCAGTCAGATATTAATAGGAAATTCCATTCCAAACATTCTCATCAGAGAAGCGAAAAACCGTGCTGCTG TGGCTCTAGTGCTAGGGTATGTATGTGGAGCTTAATTGTATATATTTCACAATTTCATTTCTGTTCTGCTACTTGTCAGT TTAGTGTGTGTTTGGACTTTGTATACCAGTTGAGTTGAGTGTTATCTATGGACTTTCATCTCATTTCATAAGAAGATTTC AGTTCTTTTTGTCTCAAAATGAGGGCTAACGTCTGTTTGCACTGCACTGAAGCTAACAAATATCCAAATATAGTCTTATT CTAAAACATATTTCATTTTCAGGGGTCAAGTTTCCATAGCTAAATATTGCGCCAAACGACTCCCACCCACCACCAATGTT CTTGCTATTCAAGGTGCAAAAATTGCCTTCAGAAGGTGCACTGACAAAGAACTATTAGGTTTGGTATATCATGCATGTAT TTAATTAATTATGCTTACTTGAGTGAAAATAGAACTCACTTCTTAACCGATTGAATGAATCTTAAATACAAAGTCTGTTT CCGTCCCTGACTTTACCTAATTAATGAACCAATTTCATTAATTCCTATTAGGTTCGGTATATCATGCATTTCTTTACTTA ATTATTGTTACTTATGGGAAAATGGAAGTCACTTCATTAACTGATTGAATGAATCTTGCATACAAAGTTTGTATCACTCA ACTCTACAACTTGCAAAACTACAACAAACTGAGAACATATCAGTTAACAATTACTAAGAAACAAGTTTTAGTTTTCTGAC TTCCTCTTCAAGAAAATCAAGTTCCAATTGACAAAAGGAAACTAGAATTATAAGTTCGTCTTCAATTATGATAGGTAGTC TCATAGAGGATCCAAGACCAAGTCTTACTAACACAGTGATCCTGTCTGATTATGGTGACTCGGAGGTGGAGAGTGAGAAA TCAACATGTGAAGATAGCAGAGAATTGGAGGAAGAAAGGTGCAAGAAAGTCTTTTCAAGATCAATATCACAGTTGGCAAG TGACTCTTCTGAGCAGAAGCTTGGATGGCCACTTCTCCGCAGGGCCAACACAGATATCTCACAGGACCGCAATGGAAGGC ACATGTCTGTGGTGCAATGGGTAATGAGCTTACCGGATCGTTCACCGCGGAAAAATGCACCCCTTTCCAGCATTAGGGAC AATTCGTCAGAACGGGACATCAACAGTGACATTGAGGATGAGAGCTATAAACCCAAAATCCTAAGTCGTAACTGGAGCAC AGACTTTCACCCTAGCACACTCAATTGCAAGTGGTTCAGCCTTGAGGTTCTTAAGTCGTGTACTTGTCAATTCTCCTCAG GTTAGATCACCACTGCTCCTTACTGTAACTACTGTTAGATTGAGACTTATCTTGCTAGCTATAATTTACCAAGTTACATA TTCATGAATCATGATAACTGAGTAGTAATGATGTCTTAGTATGTAATGATGACTTAGTTATTATGCTTTTGAAAAAAGGT ATTTTACTGGTATAGACTTTCAGTTTATAAGACCTTTTATATGTCTGTCAGTTTGTGTATAGAAGCTCGCAAGCTATTAA TGAAATACTTGTAACAGTTCATAGAGAAGCTTCTAATTTCCTCTTATGTTGTCTGCGTTTTCGGTGTCTTCCCTGTGTTA CTCTATCTTTCTAACAATAACTCTGTTCATCCTCTATTTTAACCCTATACTTGTATCATATTGCAGAAAATCTAATTGGG AAAGGAGGTAGCAATCGTGTGTATAAAGGAACCCTCCCAGATGGGAAACCTATCGCAGTCAAAGTTATGCAGTCATCAAA AGAAGACTTGAAAGATTTTTCCCGCGAGGTGGAAATCATGTCCTCATTGAAGCACAAAGGCATCACCCCTTTACTTGGTA TTTGCATTGAGGACAATGCTTTAATCTCTGTTTATGATTATTTCCCCAAAGGAAGCTTAGAGCAAAATCTACATGGTAAT GCTTTAGTGAATTTTCCTTTTCACTTCTCAATCTCACCTATTGTTAAACTTATTTGAATCTGGATTTGGTACTGATCTGA AATCTGAAATGGATGTAGGCAAGAACGAGGATGGATCTTTCTTGTCATGGGAAGTCAGATTTAATGTAGCTATAGAGATT GCTGAAGCACTCAATTACCTGCACAACGAGACTTTGAAGCCTATTATACATAGAGATGTCAAGTCCTCCAACATTCTTCT TTCCCATGTGTTTGAGCCCCAAGTACTCATAAGTTGATAGTATTAGTATTTTAGTATTTTAGTATTTAGTATTAAGAACA TAAGAGATGCCAAAATTCCTTTTTTTACTGGTTGTGTAACATTGGTATTTGTAATTATACTAGTATGAAAAAGTAGCAAC ATTACGCTTGAAAATTTTTATGTGACTCATAATTGTCCCTTCTGTGGCAGTTATCTGATTTTGGACTTGCCATATGGGGA CCAACAACCTCATCGTTTCTGACACAAGATGACTTAGTAGGAACATTTGGGTATCTTGCACCTGAATACTTCATGTATGG GAAGGTCAGTGACAAGATAGACGTATATGCCTTTGGTGTAGTGCTCCTTGAACTAATCTCAGGAAGGGAACCAATCAGCT CAGAGGCTTGTAAAGGAGAGGAGAGTTTGGTTGTGTGGGTAAGAGCTACCTACAAAAACTGCTCAAACATTTCTTCAGAA TTGATATTGACTTTAGAATCAACTGTGGAATTATTTCCAAACATGTACTTCATATAGGATATGTGTCTAAATGTCTAATG AATTCATATATACACAATGGTTTCATTTTCAGGCAAAACCAAAATTAGATAGTGGGGATGTTAAAAGCTTGTTGGATCCA AATTTGCAAGGGAAGTTTGATGTGGTCCAGATGCAAAAAATGGTTCTGGCAGCATCTCTATGCATTACACGGGCAGCGCG GCTTCGCCCTACATTGAATCAGGTAATGCCAATGTTCTCAAGCCGATAAATTCTTAGTGCATGCTTAGTAACCTTTATAC AATTAATTTTGAAGTTGGAATCAATTTTGGGAAGAAACTTGTGTGTTGCAAATTGACCGGTGAAAGTTGACCCAAACATG CTATTAGTACAGAACTAGAAGCCACATTTTCAATATATCTCAAAGTATATCTTAACGTTTAGCTCCTGAAGTATATTACT TGCATTATGAACAGATACTGAAGATCTTAAAAGGACATGATGAGAAAGTGGAAAACTTCTTTAGCTCCCATGAGAATGAT CATGACCATTATGAAAATCAAGAAAATATTGATGATGAAGTCTATCCAAATCCAAGTGCTGGTTTACACCTGAGCCTTGC ATTACTTGATGTTGACGATGACACTACATTGTATAGCAGTACAGAGCATAGCAGTAGTGAACATTTGAAAGAACCGTGGA GCAGATCATCTAGTTTCAGTTAGATTCTTTCAATCTTATGAAATTCTGTAGGTAGCAGTTTGTAGATAGACAATTAAATA AAAAATCTGCTCCCATAGCTCATTAAGAGTGGTTGGTAAATTTGTCTTATAGAGATTTGGTTTACATTTGAAGTTTCCAT TTAATAATATTTTGATTAAAGTTTCCATTAAGATGCCAGGTCCAATCATTTCTTCCTCCCCTCCTCCAAACCATTGAGGT TTGGGGTTTTCTTACTTCCGGTCTAGAATCATCTTATCATTCATCAATACTTACGAGGTAAATGCTACTCTCACACTATA TGGGAAATATGAGAAATGTTCGCGGAAGATAGAGATAAAAAGAGAAGTTAAGTAAGAGAGAAAATGAGAAATATAAATTA CTTTGACATATTAGTGGGATTACTTCTCTTTACTTTGATATAAGAAATTAAAAAATAAATAGAAACAAATATGAGGCAAG AAAAATGTGAGAAAAACGAGTGTAAAAATATAAAAATTCTAATTATAATTAGAGTTACTTTTTTTTAGATAAGCAAAATT TGTATTGAAATGAGAAGTACAAGGGGTAATTCAAACCCAATACATGAGAAAAAATGTAAACAACAAAGAGAGCAAAAAAG CATGAAAAAGCAAACCCAAACTAACAAACCCAAC
CDS sequence (LotjaGi1g1v0558800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAGGTAGTCTCATAGAGGATCCAAGACCAAGTCTTACTAACACAGTGATCCTGTCTGATTATGGTGACTCGGAGGT GGAGAGTGAGAAATCAACATGTGAAGATAGCAGAGAATTGGAGGAAGAAAGGTGCAAGAAAGTCTTTTCAAGATCAATAT CACAGTTGGCAAGTGACTCTTCTGAGCAGAAGCTTGGATGGCCACTTCTCCGCAGGGCCAACACAGATATCTCACAGGAC CGCAATGGAAGGCACATGTCTGTGGTGCAATGGGTAATGAGCTTACCGGATCGTTCACCGCGGAAAAATGCACCCCTTTC CAGCATTAGGGACAATTCGTCAGAACGGGACATCAACAGTGACATTGAGGATGAGAGCTATAAACCCAAAATCCTAAGTC GTAACTGGAGCACAGACTTTCACCCTAGCACACTCAATTGCAAGTGGTTCAGCCTTGAGGTTCTTAAGTCGTGTACTTGT CAATTCTCCTCAGAAAATCTAATTGGGAAAGGAGGTAGCAATCGTGTGTATAAAGGAACCCTCCCAGATGGGAAACCTAT CGCAGTCAAAGTTATGCAGTCATCAAAAGAAGACTTGAAAGATTTTTCCCGCGAGGTGGAAATCATGTCCTCATTGAAGC ACAAAGGCATCACCCCTTTACTTGGTATTTGCATTGAGGACAATGCTTTAATCTCTGTTTATGATTATTTCCCCAAAGGA AGCTTAGAGCAAAATCTACATGGCAAGAACGAGGATGGATCTTTCTTGTCATGGGAAGTCAGATTTAATGTAGCTATAGA GATTGCTGAAGCACTCAATTACCTGCACAACGAGACTTTGAAGCCTATTATACATAGAGATGTCAAGTCCTCCAACATTC TTCTTTCCCATGTGTTTGAGCCCCAATTATCTGATTTTGGACTTGCCATATGGGGACCAACAACCTCATCGTTTCTGACA CAAGATGACTTAGTAGGAACATTTGGGTATCTTGCACCTGAATACTTCATGTATGGGAAGGTCAGTGACAAGATAGACGT ATATGCCTTTGGTGTAGTGCTCCTTGAACTAATCTCAGGAAGGGAACCAATCAGCTCAGAGGCTTGTAAAGGAGAGGAGA GTTTGGTTGTGTGGGCAAAACCAAAATTAGATAGTGGGGATGTTAAAAGCTTGTTGGATCCAAATTTGCAAGGGAAGTTT GATGTGGTCCAGATGCAAAAAATGGTTCTGGCAGCATCTCTATGCATTACACGGGCAGCGCGGCTTCGCCCTACATTGAA TCAGATACTGAAGATCTTAAAAGGACATGATGAGAAAGTGGAAAACTTCTTTAGCTCCCATGAGAATGATCATGACCATT ATGAAAATCAAGAAAATATTGATGATGAAGTCTATCCAAATCCAAGTGCTGGTTTACACCTGAGCCTTGCATTACTTGAT GTTGACGATGACACTACATTGTATAGCAGTACAGAGCATAGCAGTAGTGAACATTTGAAAGAACCGTGGAGCAGATCATC TAGTTTCAGTTAG
Protein sequence (LotjaGi1g1v0558800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIGSLIEDPRPSLTNTVILSDYGDSEVESEKSTCEDSRELEEERCKKVFSRSISQLASDSSEQKLGWPLLRRANTDISQD RNGRHMSVVQWVMSLPDRSPRKNAPLSSIRDNSSERDINSDIEDESYKPKILSRNWSTDFHPSTLNCKWFSLEVLKSCTC QFSSENLIGKGGSNRVYKGTLPDGKPIAVKVMQSSKEDLKDFSREVEIMSSLKHKGITPLLGICIEDNALISVYDYFPKG SLEQNLHGKNEDGSFLSWEVRFNVAIEIAEALNYLHNETLKPIIHRDVKSSNILLSHVFEPQLSDFGLAIWGPTTSSFLT QDDLVGTFGYLAPEYFMYGKVSDKIDVYAFGVVLLELISGREPISSEACKGEESLVVWAKPKLDSGDVKSLLDPNLQGKF DVVQMQKMVLAASLCITRAARLRPTLNQILKILKGHDEKVENFFSSHENDHDHYENQENIDDEVYPNPSAGLHLSLALLD VDDDTTLYSSTEHSSSEHLKEPWSRSSSFS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 98 | 117 | 20 | - | – | |
| PANTHER | 119 | 490 | 372 | 1.2E-143 | – | |
| PANTHER | 119 | 490 | 372 | 1.2E-143 | – | |
| Gene3D | 126 | 236 | 111 | 7.8E-26 | – | |
| SUPERFAMILY | 141 | 433 | 293 | 1.13E-70 | ||
| SMART | 162 | 432 | 271 | 3.2E-30 | ||
| ProSiteProfiles | 162 | 444 | 283 | 36.584 | ||
| Pfam | 163 | 372 | 210 | 4.9E-41 | ||
| Gene3D | 237 | 462 | 226 | 3.0E-54 | – | |
| ProSitePatterns | 283 | 295 | 13 | - | ||
| MobiDBLite | 489 | 510 | 22 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein kinase activity | Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP. | ||
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein phosphorylation | The process of introducing a phosphate group on to a protein. |
Expression pattern of LotjaGi1g1v0558800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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