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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0620400 |
| Transcript ID | LotjaGi1g1v0620400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Mitochondrial pyruvate carrier; TAIR: AT5G20090.1 Uncharacterized protein family (UPF0041); Swiss-Prot: sp|Q949R9|MPC1_ARATH Mitochondrial pyruvate carrier 1; TrEMBL-Plants: tr|I3T3P0|I3T3P0_LOTJA Mitochondrial pyruvate carrier; Found in the gene: LotjaGi1g1v0620400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:116777140..116777679) extracted from Lotus japonicus Gifu genome v1.2.
ATGAACGCCCTCCGCTCGTTTTGGAACAGTCCCATTGGTCCAAAAACCACTCACTTTTGGGGTCCTACCTTCAACTGGAG CCTTCCTCTTGCGGTACATTCTTACTTGCCTTCCCACTATAAAGTGATTTAGTGTAAAAGCAAACTATATTAATATCATC AATCAAATTGTGGTGATCTTTTTTATTTGAATCACCTTGCAACTGCTATATATATCAGGCAGCAATGGACACAAAGAAAC CACCAGAAACCATATCTGTCAATTTGACCGCAGGTTAATTACTATAACTTTCTTCAGCATTAACATTAATATATAGGTGG TAATAACTGAGCCCATTAGTTTCCAATTTCAATTAATTAATTGTGGTAATTAATTAATTGATAAGTGGCGTTGTGTGCAG TTATGTGTGTGTATTCAGCATTGTTCATGAGGTTTGCTTGGGTAGTGAAACCACGTAATCTACATCTTCTTGTATGCCAT GTCTCCAATGAAACTGTGCAATTGTATCAGCTCTCAAGGTGGTTCAGAGCTCCAAGGTAA
CDS sequence (LotjaGi1g1v0620400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACGCCCTCCGCTCGTTTTGGAACAGTCCCATTGGTCCAAAAACCACTCACTTTTGGGGTCCTACCTTCAACTGGAG CCTTCCTCTTGCGGCAGCAATGGACACAAAGAAACCACCAGAAACCATATCTGTCAATTTGACCGCAGTTATGTGTGTGT ATTCAGCATTGTTCATGAGGTTTGCTTGGGTAGTGAAACCACGTAATCTACATCTTCTTGTATGCCATGTCTCCAATGAA ACTGTGCAATTGTATCAGCTCTCAAGGTGGTTCAGAGCTCCAAGGTAA
Protein sequence (LotjaGi1g1v0620400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNALRSFWNSPIGPKTTHFWGPTFNWSLPLAAAMDTKKPPETISVNLTAVMCVYSALFMRFAWVVKPRNLHLLVCHVSNE TVQLYQLSRWFRAPR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 42 | 42 | - | – | |
| PANTHER | 1 | 95 | 95 | 9.3E-55 | – | |
| PANTHER | 1 | 95 | 95 | 9.3E-55 | – | |
| Pfam | 4 | 92 | 89 | 1.8E-33 | ||
| TMHMM | 42 | 64 | 23 | - | – | |
| Phobius | 43 | 63 | 21 | - | – | |
| Phobius | 64 | 95 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Mitochondrial inner membrane | The inner, i.e. lumen-facing, lipid bilayer of the mitochondrial envelope. It is highly folded to form cristae. | ||
| Biological process | Mitochondrial pyruvate transmembrane transport | The process in which pyruvate is transported across a mitochondrial membrane, into or out of the mitochondrion. |
Expression pattern of LotjaGi1g1v0620400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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