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LotjaGi1g1v0628900.1

Overview

Field Value
Gene ID LotjaGi1g1v0628900
Transcript ID LotjaGi1g1v0628900.1
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description Kinase family protein; TAIR: AT5G13160.1 Protein kinase superfamily protein; Swiss-Prot: sp|Q9FE20|PBS1_ARATH Serine/threonine-protein kinase PBS1; TrEMBL-Plants: tr|A0A1J7GIQ6|A0A1J7GIQ6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0628900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:117942003..117948087) extracted from Lotus japonicus Gifu genome v1.2.

TGAAGAGCAACAGTTAGAGAGACAAATGTGGCATAAAAGGACAGATTTGGAGAGAAAGTACACCCACACAAAAAACAAAT GAAATTTGGCATGCACATCATCCCCATCACCATCACCCTCATCATCATCATCATCATAGAAACCATGAAACTGTACCATT AAAATCCCCTGAGTTTTTTCTCCAATTTCCCTGCAAATAAATTCTTCTCCTTTTCCCCACAACCCAGATATCCAAATTCC ACACACATTGTTGTTGTTGTTATAGTAGCATAGCATGATCCAATGATGCATGCATCGTTGTTACAACGTTCCATTCAACA ACGACGTTTCAACGTGTCACAGTGAAGATTCTGTTGATAATTGAAATCCGTGTACGCATTCTTCTGCGTCGTTCCATTCT TGTTTCTTCTCTCTGTTTCTGATTGGTGGGTGGTTGTTATACAAGAAAGGGCTTGCTTTTGGTTCTGAATTGTGCTAGAG GGTAATGGGTCGTTGCCCTTGTTTCGGTTCGAGGAAGAAGAGTAAGGAGAAGAATCTCAACGATCGGGAAGAGGAGGAAA AGAAGCTTAAATCTGTAGCTTCAACTGTTTCTGGAAGATCTTCAGGTTTTCTTATCACATTTGATTCATTTGCTCTATTT TTCTTGTTTTGAATTGTTAAACCTTGCTTGAAATGTAATCCCTAATTTGTAAAAAATTTCAATGGGTTTTTGGGTTTAAG CCTTTCATTCACTGTGGTTGATTCTGATTACTATTCTTTATTTTCAGTTTTTCTGTGTTTCTTTCTCCAATTTTTTGATC ATGTTTGTTTGTGAGAGTTAAGATAAATTGGCATTACAATTTGTTCTAGTTACTCCTTAGCTGAAGTTTCTGCTGATTCT TGCTTATAATTCTTGCAAGATGGTTGAAAAAGAAGATAAAGAAAAAGGCTTGGGTTGTTGTTATCTAAGGGTACTTTTTA GAAGTCTAGACAAAGCACACACCTTGGAAAACCAATGTAAATCAAACAAGATAACTACACAATTAAGGAAATTCTCAAAT TTCATACCACTTAAAGGCCTTCTTTTTAGCTATTATGATCTCTTTTCACTCTAATCTTAGTGAAGCACGAGCGTAAATTT TACGTTTGATTAGAAATCGTTGCGGTCGGATTTTCTGACTGTCTCTGTGAATTGATATACCTTCATTCTTTTGGCCTGTC AGGGAGCTTATTCTTCACTATTCACTATGTTTGGATTTGATTATTTTTTGGGAATTTTGTTTTTTAATCTCTCTTAATAT TTTATTTGTTAGCTATTTTTAACACAGATTAAGTGAATCCAAACATACAGAGTACTCAATTTGCCCTGATCTGCATAATT TGGAAACTAGACCAAATATTCATTTTATATGCTCCAATTTTTTGTGATTAAAAGGGCCTCACTTAGCTAACTATCCTTAG TCAGGAAAGTATCACTTCTGCTTTATCGTATAGAACCTTCTGAACATTTTTGGAAGCTTATGCTTCGTCTGAAATCATAT TAGGATACTAAAAGTTACAAAACGTGCTAGGAAGAGCTTATCTCCCTTGGTGACATACACACTTTGTGTAATGATTTAGC ACCTCTGTTCTTCTCCTGATTACCAGAATCTCCTTTCCCTCTTGATCAATAACTTTTAGGTCTCATTTGCACACAATTTT CTAAGAGGGAAGATAGGTGTGACTGAGAAATGATAATCAGGAAAACATAATCCACATGTTGAGTATATGCTTTTTATCAA TTTTGAAGGAAACTATTTGTAATTTGAATTTCTTAAAGGTTACCCTCCTCCCCTTGGAACTCTCTGGTTGCTTCAACTCT CATTATGCTCTTTGGGTTATCATTTCTATAATGACATTCATTTCCCATCATTCTTTGGCATGATAATTATCGTAAGATTA TCAAATATAGTGAACATTTTAAGCTTAAATACAGCTCCATCAATTAATTCTGCATATTTTCAACCCTAGCAGCTACATCT AGATGGTCAATATTTTTAGAAGAAAGCTCCTATTTAAAGACTAAATATTATATCTTTTTCATGTGTCTACTTAGTACAAA TTGATTAGATATCTTCATTGTCACACTGAGTTAATATTTTGCGACCAAAAACATGTCATGTAGATATGTGGACACATTAT ACATAATGGCTCCAAATTACAGGATAATGGTCTAAACATCTTACTTAGACTTAGAATATTAGTTCACCTTTAGCAATAAC ATGTTTAGACTTTCATTGTAGCAGTTTAGTGTGTAAATAATTTTTATGATCAGAGTCTTTTGCCAGTTTCAACATTACCT TTTTCATGAGTTTAATGAACTTCCCTGCTCTTGCAACCCACCCACCTAGAAGGTTGTTGATGAACTTTTACCCTCTCATC TTCCAGTACCACTACTAGACAGAGAGGGTCTTTGAAAAACGTTCGTATCAGCTTATAGAGTAATTAACTGCTTTGGCTTC CCTATAAGTAAAAATGTTAGACATAGTTTTGCCACACCTGAGTTTTGAACACTATTCAATCCAGTAACACTTTGTGTTTG GATACCAGTTGAGTACAATGTGAACTCACTTTCATCTCGATACATAAGAAGAATTTCGTTCATTTTGTCTTGAAGTGCAT GTAAACCTCTATTTGCACTGGTATAATAACAAAACACACCCTTATGCTACTAGATAGAGTAAATGGCAATGTAATGAAAG GGATGGAAACTGTAATTGTGAAATTATCAATGCCTGCTCTGTGACTGTTTGGCTTTGGACTGATGGAAGGCCTTCATTAT TTTGATCTATTGGCTACTCAGAAAATACTGTTGACTCCAGAATGCTTGAGATAGTAGGAAATAAGCTTATGTCTCAGAGT TGACATGATATGGTTTGATACAGGACGAAGATCAGAAGCAACTCCAACAGAGGATACTGACAGTTCTAATAAGGCTCAGA TATTCACCTTCCGAGAGCTTGCAACAGCAACAAAAAATTTTAGGGATGAAACTTTTATTGGTCAAGGTGGATTTGGAACA GTTTACAAAGGACAGCTAGAGAGAACGAATCAGGTATAATTTGATGTACGGATTTTTTTTTGCTCCTGTTACATTGGTGT TGAATATGTTGATTCTTTTACTAAGACAAGAGGTTTGGAACATTTATTCAGGTTGTGGCTGTTAAAAGACTTGATACAAC TGGTCTCCAAGGAGAGAAAGAATTTCTTGTGGAGGTTCTCATGCTTTCTCTTCTACATCATCCCAACCTTGTTAATATGA TTGGGTACTGTGCTGAAGGGGATCAACGTCTACTTGTGTATGAATACATGCCTATGGGATCCTTAGAATCTCATCTCCAT GGTAATGTAATGCAAGACTTAGTTTTGTTAACATCAAACTGCCATTAGTTGCACTTGCTTACTAATTACTGGCCTATCTA CCCTGCCTCAGTTTTCCCTGAAAAAAAAAAATGAAAAAAATTTATATATAGGCTCAGTTTACCTGAAAGGATGAAATAGT GTGCACTTCACAAAGTTAAAGAAGTTAATTCTGAAGGCTCTGCAGATAATGATGGTTTCAAAACCAAAATTCACTTGTAC AATTATACCTTATCTCTATCAATCATCAATCAAACCTCTTTTGCAACAAAGTAGTTCATATTTTCTACTCTTTTAACACA CTAGTGTTACTGACCTGGATCCCAGCAGTAAGATAATATTGCATTCACTGAAGTCATGAGACTGTGACCGATCCGATCTT AATCAGACGGCCCCAGTCTGTACACATAAAATCAACCTATTTAAATCAGAGTCGTCCGATGAAAGATCAAAAAGTTGATG TCCCATGACTTCAGTGAGTTCAGGATTATCTAACTGCAGTGAATTTGAATTCGCTAGTTACCTATGCAAATGTTGATCCA TATCTGTGATTATATTTTAGTAGTGTTGATTTGATTATGGTTATGTGCAGATCTTTCATCTGACCAAGAACCTCTTGATT GGAATACCAGAATGAAGATAGCTGCTGGGGCCGCAAGAGGATTAAATTATCTGCACCATGAAGCAAATCCTTCTGTTATA TACAGGGATCTGAAAACATCCAATATACTCTTGGGTGAAGGTTTCCATCCAAAACTTTCTGATTTTGGGCTTGCAAAGTT TGGTCCAACTGGAGACCAATCATTTGTTAACACAAGGGTCATGGGAACACATGGTTACTGTGCTCCTGAGTATGCCACAA GTGGAAAATTAACAATGAGATCTGACATATACAGTTTTGGGGTTGTGTTGTTGGAGCTAATTACTGGACGTAGAGCATAT GATGAAACCCGTGGCCCTGAAAAGCATCTTGTTGACTGGGTAAGTACTATCAAATTATATTTATTTTCGTACTTGTGGAA TCATAATGGTTGACAATGTATGGAATCATAACCGTTGATCAAAATCATCTGTTAAGATTTATTAAACCCAGTTTCTGATA TTTGTTATACATTGATTACGTTCTATCATAATTTCAACATTCTAAAGATGTCAGATTTGGTGCAACTTTACGCATCTTCT CATCAGTCTCTTTTAGTATTTCTAACTTATCATTGTGCACTTGAAAGAGGAAGACGCTGAATTAATAAGCATTTTTTTGT TTGATTAGCTGCTGTTAATCTATGAATGTCTTTGCATGTGAATATGGTAAGGAAGGAATTATAATGCCCTTAGATTGAAC AAATATTTGATTTCTCAATTTGCTATCTAGGATCCAGGTGATATGACACATTGCTTATTATATTCTTGGGATCAAACATG AGTTTCAGAATATTACATGATCTTTCTACTTTATATCCAATTGGGTTAAATCTTAAATGCTATCTGAACTCTGAAGTCTC AGTTATGAGGAGATAATCTAAAATAATCACTCTTCAAGAAATCATAACTTAAGAATACACAATGGTTTTAGTTGGCTACT ATGCTTTTCATTCATAAGTAAGTAGTTGTCACAGCATTGTTTTTCCATCTGCAAGGCTAACTGAACTTGGTTTCCACATA CCTGTAGGCACGCCCAATGTTTAGAGACAAAAGGAATTTTCCAAGATTGGTAGATCCGCGTTTGGGAGGTCACTTCCCAG GAAGTTGTCTAAAGATGGCTATTGAAATGGCTTCCATGTGTCTTCGAGAGGAGCCGCGGCACCGGCCTGATGCAGGTGAT ATAATGCTAGCCCTAGATTTTTTGTCATCCAAGCAGTATGTCCCAAAAGTATCAGGTACAGTTAAGACAGGAGGGATGGA GAGTGGTGACTCCCCAAGTCCAAAAGAAGGATCAATGGTTTTGGCTAAAGACTCACAGAGAGAGAAAGCTGTTGCAGAGG CCAAGCTTTGGGGGGAGACATGGAGACATAAAAGAAAACAAAGTGGCCAAAGTACTCCTGAGGATGCAAGTAGGTAGTGA AATTGAATTTTTGTTCTCTTTTCTACATGCACAGGGTATCAAGGAAGGTTCAACATAAAGGGAAAGCATGTGTTCAATAT TTAAATGTAGACAAATAGAATTGGTTAGCCAGCTATTTATAAAAAGTGGTGTTTAGGAAATAGTGAAGCTGAGGCTCAAC TTAATGTGATTTGACATGAGTTTTCACTATTAAGGATTGCTGCACTAAAACAAGAGATATTATTAACAGCTCAATGTTTT AGCATACCTTAATACTGTTGGATGCAAACACAATTTTTCGTTTATAATGGAAAATAGATAGCAAATTGATGAAAGTTACA ATGGATTGCTGAGATTTACTGTTATGTAAATGTATGCGACGTTTAAGCTTGAGGCTATGTTTGGATACCTCTTGGCATTA ATGCAAACAGACGTTAAATTAGCATTCACTTCAAGACGAAAAGTGAACGAAACTCTTCTTATGAGTCAGGATGCAAGTCC GTTCACATTGCACTTAACTAGTGTCTAAACGAGTCATGATGAAAAATCCTAACAAGCGGAATATTGGGCATGTTCCAGTC TAATTCTTGAGGGGCCAAAGAGCTTGTTCGGGCACGGGCTTATTTTATTGGAGCTTATCTACTAGAAAATGTACTAAGTA TAAGT
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0628900.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCTTTCTCTTCTACATCATCCCAACCTTGTTAATATGATTGGGTACTGTGCTGAAGGGGATCAACGTCTACTTGTGTA TGAATACATGCCTATGGGATCCTTAGAATCTCATCTCCATGATCTTTCATCTGACCAAGAACCTCTTGATTGGAATACCA GAATGAAGATAGCTGCTGGGGCCGCAAGAGGATTAAATTATCTGCACCATGAAGCAAATCCTTCTGTTATATACAGGGAT CTGAAAACATCCAATATACTCTTGGGTGAAGGTTTCCATCCAAAACTTTCTGATTTTGGGCTTGCAAAGTTTGGTCCAAC TGGAGACCAATCATTTGTTAACACAAGGGTCATGGGAACACATGGTTACTGTGCTCCTGAGTATGCCACAAGTGGAAAAT TAACAATGAGATCTGACATATACAGTTTTGGGGTTGTGTTGTTGGAGCTAATTACTGGACGTAGAGCATATGATGAAACC CGTGGCCCTGAAAAGCATCTTGTTGACTGGGCACGCCCAATGTTTAGAGACAAAAGGAATTTTCCAAGATTGGTAGATCC GCGTTTGGGAGGTCACTTCCCAGGAAGTTGTCTAAAGATGGCTATTGAAATGGCTTCCATGTGTCTTCGAGAGGAGCCGC GGCACCGGCCTGATGCAGGTGATATAATGCTAGCCCTAGATTTTTTGTCATCCAAGCAGTATGTCCCAAAAGTATCAGGT ACAGTTAAGACAGGAGGGATGGAGAGTGGTGACTCCCCAAGTCCAAAAGAAGGATCAATGGTTTTGGCTAAAGACTCACA GAGAGAGAAAGCTGTTGCAGAGGCCAAGCTTTGGGGGGAGACATGGAGACATAAAAGAAAACAAAGTGGCCAAAGTACTC CTGAGGATGCAAGTAGGTAG
Download CDS Sequence

Protein sequence (LotjaGi1g1v0628900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MLSLLHHPNLVNMIGYCAEGDQRLLVYEYMPMGSLESHLHDLSSDQEPLDWNTRMKIAAGAARGLNYLHHEANPSVIYRD LKTSNILLGEGFHPKLSDFGLAKFGPTGDQSFVNTRVMGTHGYCAPEYATSGKLTMRSDIYSFGVVLLELITGRRAYDET RGPEKHLVDWARPMFRDKRNFPRLVDPRLGGHFPGSCLKMAIEMASMCLREEPRHRPDAGDIMLALDFLSSKQYVPKVSG TVKTGGMESGDSPSPKEGSMVLAKDSQREKAVAEAKLWGETWRHKRKQSGQSTPEDASR
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR27001
1 262 262 8.9E-143 –
Gene3D
G3DSA:3.30.200.20
1 30 30 3.0E-10 –
ProSiteProfiles
PS50011
1 229 229 33.064
IPR000719
PANTHER
PTHR27001:SF690
1 262 262 8.9E-143 –
SMART
SM00220
1 229 229 9.9E-16
IPR000719
Pfam
PF00069
2 223 222 3.6E-37
IPR000719
SUPERFAMILY
SSF56112
2 228 227 4.47E-66
IPR011009
Gene3D
G3DSA:1.10.510.10
31 242 212 3.4E-61 –
ProSitePatterns
PS00108
76 88 13 -
IPR008271
MobiDBLite
mobidb-lite
240 299 60 - –
MobiDBLite
mobidb-lite
262 292 31 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004672
Molecular function Protein kinase activity Catalysis of the phosphorylation of an amino acid residue in a protein, usually according to the reaction: a protein + ATP = a phosphoprotein + ADP.
Subterm of
GO:0005524
Molecular function ATP binding Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
Subterm of
GO:0006468
Biological process Protein phosphorylation The process of introducing a phosphate group on to a protein.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0628900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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