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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0658100 |
| Transcript ID | LotjaGi1g1v0658100.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein NRT1/ PTR FAMILY 1.1; TAIR: AT1G68570.1 Major facilitator superfamily protein; Swiss-Prot: sp|Q9SX20|PTR18_ARATH Protein NRT1/ PTR FAMILY 3.1; TrEMBL-Plants: tr|K7KEL8|K7KEL8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0658100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:121873289..121879063) extracted from Lotus japonicus Gifu genome v1.2.
TATAGATGAATGCAAAACTGCAAATGGATTCATAGAAGAAAAGAAGTATCTCCAGCAAGGTGCAGATATGGAAAGAGAGG AGAAGAGCATGGGAAGTGAGGAGGAGGCCAAGGGGAAACCGTGGCGACGAGGAGGCATCCGGACATTGCCTTTCATCCTT GGTAATTAGTTCTGCTGAATGCTCACTATGAATTCATTCTCAGATAAATATCTTCTCATTATTATAATTCTCTTGATTGT AGTTGCTTTGCTAGCTGTTCACTTCATAGCAGATTTATTTCATGCTGAATCTTCTTCCTAATTATCCTTCCCCTGCTTTT TCTTAGCCTATTATCTAGCAGATCAATCTAAGTTGCATTTTTTTTTTAGATTTAAGTTGAATTAATTTGAAAACATTTTC AATTCAATGGAAGTAAGAAGTTACTTTCACATTCGCCACACTGAAATTCATGTATTTTAGTTGAAATTGTATGTAATACA TGTGAACTGAAAATCAAAGACAGAGACTTGGACATTAAATTGCTGCTGCAAAACCTTCATTGTTATGCGTCGGTAATCTA GTCAGTTCTTGACACATGCAAGTCAAGTTGCTGCTTAATTTACTAAGTGCTAGTGAATTAATAATAATTTAGAGAAGACT AATTAGAATAGTAGTCCATGTGCCAGTAATATTTTAGCATTAATTCTTGATTAAGTTAGTCAAGTTGTGACTTAATAAAC TCACAAGTGTGTTTCAATTTCAAGACAAGCTCTGTCCTGTGTGTGACCTTTATCTTTTACGGCCGTTGTCATATTTCATA TGATTATTAAGTTTTTAAAATGCATGATTATTTTCTTCTTTAAACAACTTTACTAATTATCTTCACAGATCACATGCATC TTTTTCCAATATTATAAACCAAAATTAGTTCTGGTGACAAAATTGATTTTGATGAAAGAAAAGGTCATTGTAACATGCAA TTACAACTTTTGTTATACATTTTCAATTAACAACTAAATTTGACAATTACTTATCATCACTATTCACTAACCCTTGATTT CATATATGTCCTGTTTGAACCAAGGTTTACTTTGAGTGGTTTAATTTGGTGCAGCTAACGAGTTATGTGATAGATTTGCG GTGGCTGGTTTTAATGGGAACTTAATAAGTTACCTCACACAAGAGCTGAACATGCCACTGGTTGCAGCCGCCAACACTCT CACAATCTTTGGTGGAACAGCTAGCTTCACTCCTCTCATTGGTGCTATCATTGCTGAGTCCTTTGCTGGCCGCTTTTGGA CCATCACCATTGCTTCTCTTATCTATGAACTGGTAACTTTCTTACCTTCCCCTCTTTCCCATACAATCTCCTTTTATTAA CCATCAAAATACAAGCATTCTTAATTACATTACTTCAATATTTCAATTAAAAAACTAAACAATCAAGAGTCACAACTGAA AGGGCTTTCAGCCCTCCACATTAGCAAAAGAAAAAAGAGTCACAACTGAAAGCAAAATGAGATTTAATATCCTTGTACAT TTAGTAGCTAGTATGTTATATACGCCGCCGGAAAGTGTTGTGGTCATTGTCGCGACACCGGATTAAATGTTAGGGTTTGG AGCAGAGAATGATTAAAACTAACTAAGGTTACCATGTTAATCGGCGACTGAGCCAAAAATAAGCCACATATGCTTTACGA CATCATGAGTGGTTATTTCAAAAAAAAAAGGCTTAAAGGGTCCAAAGGCCCCTTAAATTACAAAGAGAATCAAATCCAGG ACCTAGAAAAATTTTGCATCAAATTGGGTTCCTAAGAAATTTTTTTTTAATTCAATTAAGGCCAAATGCTGCCACAGCTC AATTTTGTCCTAGTCATCAATTACACGTGGCTTTTATAATTATTTTTTAATTAAAAAATTAAATGATGTGGATAATAAAA ATTAAATTAAAATAAAAAGTATTAATTAAAAATAAAAAAATCATCTAAAAACCATACTTCCTAACTAGAAGATTTTAATC TTAAATAAACACCAACAACCGAAATTTGTTTCTTAATCAAATATTGCAAAAATTGCTCTGTTTATCAACCATAGTGTGAA ACTCACGAACAAACCAAAACAAATTCCCTCCCCTCTTAACACAAAAATTAGTCTACAAACATGTCAAAGTTTTAAACTTT TCAACATTAAATCACCAAGAAATATGCACAACCACAAATTTTGAGCACAACCACGAACTGTCGTCACTGAGGAAGCAGGA GTGTGAGAAGAGGAGTGAAATAAGAACCCAGGAAACCCAAAAATAAGAACCCATAAACTCCTAAATGGAAAAATCTCCAG ATACATCTTATTCTGTAGCATCAAGAAGAGGCTCATGAAAAACCCAGATCGTGGATGGTAACAAAGCAGAGGTTCATGAT AAACCCAGATCTAACCACCGTCGGCGAAGCCCAATCTGTTTCTAAGGCGCATCCATGGCTGCTCTAATCCTCGGCGATCT ATCTCCTCTATGGTCTCGATCTTTTCCTCTTCTCTCAAACTCATCCATGGCCGTTTTGCTTCAACCCTTGAGTTTTGGAC TTTTGTGTTTCAGGGGTGAAGTGGTTGGAGTTGGCTAGGGATTTGGGTTGGGGTGTGCTAGTTCGATTTGGGGATTTGGA TTAAGAGCCTGAATCGTGATCTGGGGTCTGGTACGCCGTCGATGCTCAGGCCTTCACAATTCACGGTTCTCTCTTTCCAT GGTCAGGTTCTAGAGAATGGAGATATTTGAGGTGGGGGTTACGATTTTGTGGGTTTTGAAAGTCATTGATTTTGCGGGTT ACGTGTTCTGGTGGTTGTGGGATTGGCTCTGAAATTAGATTTCTGGAGGTGGAGGATGAAGGATATGTAGATGATGAACG TGATCTGAAGATGAAGAGAATGAAGATCGTGATTGTGAATTTCAAGATTTTGTGGGTTTTAATTGTGTGATTAGATGGGT TTTCTCCTTCATCTTCCTCTGTTTTGGGTTTGGGTTTGGTGAGGTTGATAGATTGTGTTTGGAATTTGTTATTTAGTTTA GGTAATTATTTAGTTAGTTTTGGAAAGTTTAGGTAATTATTTAGTTAGTTTTGGAATTAGACTAGGGATTTTATTTAAAT TTGGGATTTTATGAAGTTTTTAATTTTTTTTCTGCTTAAATAACTGAGTTGGAATAAAAAAAATAAAGTTTTCTTATTTT TTAATTAAAAAAAAATTAAAAATGCCAAGTGGAAACGGTGACTAGGACAAAATTGAGCTGTGGCAGCATTTGGCCTTAAT TGAATTAAAAAAAATTTCTTAGGGACCCAATTTGATGCAAAATTTTTCTAGGTCCTGGATTTGATTCCCTTTGTAATTTC AGGGGCCTTTGGACCCTTTAAGCCAAAAAAAAAATATGGACCAAAAAAGATGCAAAAACAAAATCAGGGACAAATTTAGA TTTACCCCTATATTTTAAGGACTAGAAACGTATTTAAACCGTAAAATTATCATATTTGAAGTTAATCAGATTATTCAGAA GTATCAAATCCAAAATTCTTTGCATTTTCCATTTTAGCTCACCATATTGCATATATTTCATCCCAATTATTTTGTCACAC TCTTGCTTGATTTATCACAGGGAATGATCAGTGTAACACTATCAACCATACTTCCACATTTGCGCCCCCCACCATGCCCA ACTCAAGTGAATTGCCAAGAAGCCACATCCTCACAGCTATCCATATTCTACATCTCTCTCGTTCTTATATCCCTTGGATC TGGTGGCATAAGACCTTGTGTTGTGCCTTACTTAGGAGACCAATTTGACATGACAAAAAATGGTGTGGCATCTAGGAAGT GGAACATCTTCAATTGGTACTTCTTCTTCTTGGGATTTGCCTCTCTAAGTGCTTTGACCATTGTGGTTTACATTCAAGAC AACACTGGCTGGGGCTGGGGTTTTGGAATACCAACTATTGTCATGTTCATATCCATCATTGCCTTTGTGTTGGGCTCACC ATTTTATAAGAATGTGAAGCCAGACGGGAGCCCTTTGGTTCGTTTGGCACAAGTGATTGTGGCGGCTATAAAGAAGAGGA ATGTGGTCTTACCAGACAATCCCAATCTTTTGTACCAAAATAGGGAGCTTGATGCTACTATTTCCTTGGAAGGAAGGCTT TTACACACAGATCAGTATAAGTAAGTCATTTATATATGGTTTCTTTTGACTCAAAACAAACTATGAAACTTCAAACAAAC TGCAGGTAATCACTTAAAAAAAGCAGTAAATAGTCACTTTAGTGTCTGAAGGTACTTTCGTACCTCACTAAGGAAATAGA CAAAATAACTTCTAAAATATAAAACCAAAATAACTTCTGCAGCTTTTTCGTTTTTTGAGGAGCAGTTTTCCCTATTTCCA TCTATTGGAGACTAAATTGACCGTCGTCGTAAGCGTCACTATTTTGTTACTCATTGAAAAAGTCAATTTGACATATTGAT TTATACTATAGTTCCATTATTATTGGACAAAATGACCATCAAAATGACTATTTACTACTATGAATATGAGCTTACCAAGC TAATAAACAATTTCACTTTAGTTGCATGAACTGCTACAAGAACAGGAATATTGTGCCATTTCCTAATTTAGCTGCTAATG GGTTGAGTTTTCATTTGAACACTGAACATTACTTCATTGTGAGTTACATCTGCAGATGGTTGGACAAGGCAGCAATTGTC ACAGAAGAAGAGACCAGAGACCCAAATGCAGCACCAAATTTATGGAAACTAGCCACTGTCCACAGAGTTGAGGAGCTAAA ATCCATCATCAGAATCCTCCCAATCAGTGCAACAGGAATATTACTCATTGCTGGTTCATCACATCTACCTAGCTTCGTCA TTCAACAAGCTCGCACGATGGACCGCCACCTCTCTCACTCATTCCAAATCTCCCCTGCCAACATGTCTGTCTTCAGTGTC CTAACCATGATGTCAGGACTAATTCTCTACGAACGCCTCTTTGTTCCGCTCGCTCGAAGATTCACAGGGAACCCGTCCGG GATCACATGCTTACAGAGAATGGGAATAGGCTTTGTGATTAACATCTTAGCCACAGCAATTTCAGCACCAGTGGAAATCA GAAGGAAAGAAATTGCTGCAAAGTACAATTTACTTGATGATGTTAAAGCCACTATTCCTATTAGTGTGTTCTGGTTGGCG CCTCAGTATTGTTTACATGGATTGGCTGATGTTTTTATGTCTGTTGGGCTTTTTGAGTTTCTGTTTGATCAAGCACCTGA AAGCATGAGAAGTAGTGCTACAGCTATATACTGCATAATTATAGCTATTGGGAGCTATGCTGGTACATTCATAGTGTCAC TTGTTCATAAGTATAGTGGAAAGGATGAAAGGAACTGGTTACCTGATAGGAACCTCAATAGGGGAAGATTGGAGTGCTAT TACTGGCTTGTTAGTGGGATTCAAGTTCTGAATCTTGTTTATTATGGAGTATGTGTTTGGTTTTACACTTACAAGCCCTT GGAAGAAGTTGCTGAAGTGATGAACAAGGAAGAGGACTTGGAAGAGGTCAATACTAAAATCTCATGTGTCAAATTGAAAC ATGATGGGATGGATGATGAATAAGGAGCTTTCACAAAATCAATGTATTTATGTTCATGTTCAAAGTGACTGATTTTCATT CTTGGACTCTTTGAAACTCATTTTCCTCAATAGGATTTTATCACATCAATTAAAAATGAATGAAATATCACTGTTTCATC AGATTTAACAGCCTT
CDS sequence (LotjaGi1g1v0658100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAGAGAGGAGAAGAGCATGGGAAGTGAGGAGGAGGCCAAGGGGAAACCGTGGCGACGAGGAGGCATCCGGACATT GCCTTTCATCCTTGCTAACGAGTTATGTGATAGATTTGCGGTGGCTGGTTTTAATGGGAACTTAATAAGTTACCTCACAC AAGAGCTGAACATGCCACTGGTTGCAGCCGCCAACACTCTCACAATCTTTGGTGGAACAGCTAGCTTCACTCCTCTCATT GGTGCTATCATTGCTGAGTCCTTTGCTGGCCGCTTTTGGACCATCACCATTGCTTCTCTTATCTATGAACTGGGAATGAT CAGTGTAACACTATCAACCATACTTCCACATTTGCGCCCCCCACCATGCCCAACTCAAGTGAATTGCCAAGAAGCCACAT CCTCACAGCTATCCATATTCTACATCTCTCTCGTTCTTATATCCCTTGGATCTGGTGGCATAAGACCTTGTGTTGTGCCT TACTTAGGAGACCAATTTGACATGACAAAAAATGGTGTGGCATCTAGGAAGTGGAACATCTTCAATTGGTACTTCTTCTT CTTGGGATTTGCCTCTCTAAGTGCTTTGACCATTGTGGTTTACATTCAAGACAACACTGGCTGGGGCTGGGGTTTTGGAA TACCAACTATTGTCATGTTCATATCCATCATTGCCTTTGTGTTGGGCTCACCATTTTATAAGAATGTGAAGCCAGACGGG AGCCCTTTGGTTCGTTTGGCACAAGTGATTGTGGCGGCTATAAAGAAGAGGAATGTGGTCTTACCAGACAATCCCAATCT TTTGTACCAAAATAGGGAGCTTGATGCTACTATTTCCTTGGAAGGAAGGCTTTTACACACAGATCAGTATAAATGGTTGG ACAAGGCAGCAATTGTCACAGAAGAAGAGACCAGAGACCCAAATGCAGCACCAAATTTATGGAAACTAGCCACTGTCCAC AGAGTTGAGGAGCTAAAATCCATCATCAGAATCCTCCCAATCAGTGCAACAGGAATATTACTCATTGCTGGTTCATCACA TCTACCTAGCTTCGTCATTCAACAAGCTCGCACGATGGACCGCCACCTCTCTCACTCATTCCAAATCTCCCCTGCCAACA TGTCTGTCTTCAGTGTCCTAACCATGATGTCAGGACTAATTCTCTACGAACGCCTCTTTGTTCCGCTCGCTCGAAGATTC ACAGGGAACCCGTCCGGGATCACATGCTTACAGAGAATGGGAATAGGCTTTGTGATTAACATCTTAGCCACAGCAATTTC AGCACCAGTGGAAATCAGAAGGAAAGAAATTGCTGCAAAGTACAATTTACTTGATGATGTTAAAGCCACTATTCCTATTA GTGTGTTCTGGTTGGCGCCTCAGTATTGTTTACATGGATTGGCTGATGTTTTTATGTCTGTTGGGCTTTTTGAGTTTCTG TTTGATCAAGCACCTGAAAGCATGAGAAGTAGTGCTACAGCTATATACTGCATAATTATAGCTATTGGGAGCTATGCTGG TACATTCATAGTGTCACTTGTTCATAAGTATAGTGGAAAGGATGAAAGGAACTGGTTACCTGATAGGAACCTCAATAGGG GAAGATTGGAGTGCTATTACTGGCTTGTTAGTGGGATTCAAGTTCTGAATCTTGTTTATTATGGAGTATGTGTTTGGTTT TACACTTACAAGCCCTTGGAAGAAGTTGCTGAAGTGATGAACAAGGAAGAGGACTTGGAAGAGGTCAATACTAAAATCTC ATGTGTCAAATTGAAACATGATGGGATGGATGATGAATAA
Protein sequence (LotjaGi1g1v0658100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEREEKSMGSEEEAKGKPWRRGGIRTLPFILANELCDRFAVAGFNGNLISYLTQELNMPLVAAANTLTIFGGTASFTPLI GAIIAESFAGRFWTITIASLIYELGMISVTLSTILPHLRPPPCPTQVNCQEATSSQLSIFYISLVLISLGSGGIRPCVVP YLGDQFDMTKNGVASRKWNIFNWYFFFLGFASLSALTIVVYIQDNTGWGWGFGIPTIVMFISIIAFVLGSPFYKNVKPDG SPLVRLAQVIVAAIKKRNVVLPDNPNLLYQNRELDATISLEGRLLHTDQYKWLDKAAIVTEEETRDPNAAPNLWKLATVH RVEELKSIIRILPISATGILLIAGSSHLPSFVIQQARTMDRHLSHSFQISPANMSVFSVLTMMSGLILYERLFVPLARRF TGNPSGITCLQRMGIGFVINILATAISAPVEIRRKEIAAKYNLLDDVKATIPISVFWLAPQYCLHGLADVFMSVGLFEFL FDQAPESMRSSATAIYCIIIAIGSYAGTFIVSLVHKYSGKDERNWLPDRNLNRGRLECYYWLVSGIQVLNLVYYGVCVWF YTYKPLEEVAEVMNKEEDLEEVNTKISCVKLKHDGMDDE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 59 | 59 | - | – | |
| PANTHER | 7 | 587 | 581 | 0.0 | ||
| PANTHER | 7 | 587 | 581 | 0.0 | – | |
| SUPERFAMILY | 12 | 570 | 559 | 1.57E-27 | ||
| CDD | 25 | 560 | 536 | 0.0 | – | |
| Phobius | 60 | 85 | 26 | - | – | |
| TMHMM | 63 | 85 | 23 | - | – | |
| Phobius | 86 | 91 | 6 | - | – | |
| Phobius | 92 | 118 | 27 | - | – | |
| Pfam | 92 | 525 | 434 | 9.8E-91 | ||
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 119 | 137 | 19 | - | – | |
| TMHMM | 137 | 159 | 23 | - | – | |
| Phobius | 138 | 162 | 25 | - | – | |
| Phobius | 163 | 182 | 20 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 183 | 202 | 20 | - | – | |
| Phobius | 203 | 207 | 5 | - | – | |
| TMHMM | 207 | 229 | 23 | - | – | |
| Phobius | 208 | 228 | 21 | - | – | |
| Phobius | 229 | 330 | 102 | - | – | |
| Phobius | 331 | 352 | 22 | - | – | |
| TMHMM | 331 | 353 | 23 | - | – | |
| Phobius | 353 | 371 | 19 | - | – | |
| TMHMM | 368 | 390 | 23 | - | – | |
| Phobius | 372 | 389 | 18 | - | – | |
| Phobius | 390 | 461 | 72 | - | – | |
| TMHMM | 455 | 477 | 23 | - | – | |
| Phobius | 462 | 481 | 20 | - | – | |
| Phobius | 482 | 492 | 11 | - | – | |
| TMHMM | 492 | 514 | 23 | - | – | |
| Phobius | 493 | 517 | 25 | - | – | |
| Phobius | 518 | 537 | 20 | - | – | |
| Phobius | 538 | 561 | 24 | - | – | |
| TMHMM | 541 | 563 | 23 | - | – | |
| Phobius | 562 | 599 | 38 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi1g1v0658100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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