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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0686700 |
| Transcript ID | LotjaGi1g1v0686700.3 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Heparan-alpha-glucosaminide N-acetyltransferase; TAIR: AT5G27730.3 heparan-alpha-glucosaminide N-acetyltransferase-like protein (DUF1624); Swiss-Prot: sp|Q3UDW8|HGNAT_MOUSE Heparan-alpha-glucosaminide N-acetyltransferase; TrEMBL-Plants: tr|A0A0R0KSG2|A0A0R0KSG2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0686700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125385353..125388747) extracted from Lotus japonicus Gifu genome v1.2.
AGGGTTGCAACCCTTGATGCATTTAGAGGTCTCACCATAGTGGTTAGTGCCTAAACCTTATTAGCATTTGCTATAGCGTT TATTTAAACATATCTTATAGTATAAATACTTATGCGTGTCTTATGTCACGCTTATGAAAATAGTTTATGACCTGCTTTTT GGCTTTTTTGATAAGATTCTTATATCAGTTTGCTAATAAACGCTCATAGGATAAGTAATATTCAATCACATAATCTATTT GGCTTATAAGTAATTCATTGTCTAAGTATATATTTTTTGTTTGGCTATCTATTTGTAGTTGATGATACTGGTAGATGATG CTGGTGAAGCTTATCCACGCATTGATCACTCCCCTTGGAATGGATGTACTTTGGCTGATTTTGTTATGCCTTTCTTTCTT TTCATTGTTGGGGTTGCAATAGCCCTTGCACTCAAGGTTCGTATTCCATTCTCTGTTTTCTGTCCTGTTTCTCAAGTGAC AAGGTTAACTTATTAGTGTTTCAATTTTATTCTGGTCAATTTTCATGGTTTGTATAATCAGCATATGATGTCGATTTAGT ACATTGATAAAATTGATTTTAATGTTGCAGAGAATCCCCAAGATTAAGGATGCTGTAAAGAAGATAATCCTTAGGACATT GAAGCTTCTCTTCTGGGGTATAATTTTGCAAGGTAAGCAATTACAAAACTACTCAAACTCTATTTAAGTTGGATATATAT TTGAGTAAATCTTAGTGCACTGATAAATTTGATTATATATATAACATGCTACAGGTGGATACTCTCATGCCCCTGATGAT CTCGCATATGGAGTAGACATGAAGTTTATCAGATGGTTTGGCATTCTCCAGGTGTGGCTCAAATTTAAGTTAAGAGACCG TTTGGATATCAATCAGAAAGTATCAACAACAGAAAATTAAGACATCCTGAAACACTGAACAAAAAGTGTCTCAAGACTTG TTATTTTTCCATTTTCATATTTTCTGACGAACAGGTTTGCAAACGGGCTCTAAATGTATGGGGTATCTATCTAGAATAAG CAAAATAATCCCACTGCAATGCAATTCTTGAATAACTAACCATGTTTACGAGGTTTTGTGTGCAGAGAATAGCTCTTGTA TACTGTGTTGTGGCTCTAATAGAGACATTTACCACCAAGCTTAGACCCACTACCTTGAGTCCTGGATACCTATCCATTTT CACTGCCTACAGATGGCAATGGTGAGAAAAAAGCAACACAAATTCAACTTCAAACATGCTTAATTACATTAAAAAAGATT GAAACTCATTGATACATGGAGATTTTGAACTTGCTTAATTTATTAATAGTAAAATGTACATGTTTGTGTCACATAGGTTT GGGGGCTTCGTGGCATTTCTCATTTACATGATCACAACCTTTGCCCTTTATGTTCCTGATTGGAGTTTTGTAGATCATGT TCATGGCAATGAACCAAAGAGATACACAGTACATTTTCACTCTCTGTAGAGTCTTCATTCTTCAGAATTGTTACTAGACA CTACTAAACATTTGTTTATAGTTTTTAATTATTTTTGTTAATCCTTCCATTTATTAGGTGATATGTGGCATGAGAGGGCA CCTAGGACCTGCATGTAATGCTGTTGGGTATGTGGATAGGCAAGTTTGGGGGGTTAACCATCTTTATTCTCAGCCTGTAT GGGCGCGCCTCAAGGTGAGTATTCACCATATGTGACCGTGATTTTGGCCGCAACAACTATGTTTATTCGCAATTTTCTAG AATATAAAGGATCTCAAAACAACCATGATGCGACTGTTATCACGAATGCAATTTAAAACCTTGAATTATTTAGGGCGTGC TTGATTTATTTTTTATTTGCAGGCATGCACGTTCAGCTCTCCAAGTACAGGTCCTTTTCACAAAGATGCTCCCAGTTGGT GTCTTGCTCCCTTTGAACCTGAGGGCTTGTTGAGGTTTGCTGTTCATTTTTATTTTCTTCTATATATGTCAAAAAAATTA AAGTTAATTCTCAAATTAAACCCTAATATTTCTCAGAAAAATCACTGGACACCAATTTTGCGGCGACCTTGTAATTTGTG TCCTTTAGAAACGGTCACAAATTGCAGGTGCCTCAGGTATTTGCAGCAAAAATGGTGTTTACAAATCAAACTCATCTTAG ACTGGTTAGTCCTGATATTAAAGAAATATCTTCCAAAGTCCTCTATTCATTCAGATGTTGATCACATTAGTTCTAAAAGG GGACTAGAGTCACTGAAACCAGAGATATTTCTTTAATTTCAAGTCTAATTTGAAGTAACTGATAAAGGTTAAGGATTAAT TTGGAGGTCCCCTCTAAAAACTTGGGTTACTTTATAAACAAGTAACCTCTGTTTATCTATCTGTCTATTATTAGTAATAT TAAAAAAGTTTTATTTTTATTTTTATAATTAGTTCCATATCAGCAATCCTCTCTGGCACTATCGGCATCCATTATGGGCA CGTCTTGATTCATTTCAAGGTTACTAAACTTCATTACCCTGTTATTATACATACCCTAAACTTCTATTGTTGTGTAAATG CAATTTAGTGAATGCTAATAGTGAATAAAATTTTGGCAGGGTCATTCAGAGAGGCTCAAACAGTGGGTTTCAATGGGGCT AGTGTTATTCATCATAGCCATCATCCTTCATTTCACAGATGGTAAGCTAGAGAGTAGAGACACAAACATGCCTCAAAATC AAAATCCATCTAAGAAAAATTCCATCATGAAAATATTTTGTCCCATTTCCCATCCTATTTTCCTATCCCTCTGGTGAAAT TTTGAAACATCATTTAAGAAAACATAGGTAAGTTGGTTACAAACTTACACATGTAATTCTTAATTGATACGACAAAATTT TATTAGCGGAACATAGAAATGAGATAGAAAATGGGACGGAAGATCTTCATCTCCATTCGCAAACCTTAACAAAGTTAGCG GAACATAGAAATGAGATAGAAAATGGGACGGAAGATCTTCATCTCCATTCGCAAACCTTAACAAAGTTTTCATGGAATAC TAATTGCAGCTATCCCACTTAACAAGCAACTCTACAGCTCCAGCTATGTTTGTTTCACAGCTGGGGCAGCTGCACTTGTC TTCTCTATGTTATATATACTGGTAGGTAGCATACTCTCTTTATCTCGAACCAACCATTTCAAAATTTTAAGCCGCTCGGA AAAATAATGTGCATGGTTTTATATTATAATGCTAACAATTTTTTTTAATTTGCTTTTATTTATCAAACAGATTGATGTTT GGGGGCTTCGTACACCATTCTTATTTTTGGAGTGGATAGGAATGAATGCTATGCTAGTCTTTGTGATGGCAGCTCAGGGC ATCTTCGCAGCATTTGTAAATGGCTGGTTTTATGA
CDS sequence (LotjaGi1g1v0686700.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATACTGGTAGATGATGCTGGTGAAGCTTATCCACGCATTGATCACTCCCCTTGGAATGGATGTACTTTGGCTGATTT TGTTATGCCTTTCTTTCTTTTCATTGTTGGGGTTGCAATAGCCCTTGCACTCAAGAGAATCCCCAAGATTAAGGATGCTG TAAAGAAGATAATCCTTAGGACATTGAAGCTTCTCTTCTGGGGTATAATTTTGCAAGGTGGATACTCTCATGCCCCTGAT GATCTCGCATATGGAGTAGACATGAAGTTTATCAGATGGTTTGGCATTCTCCAGAGAATAGCTCTTGTATACTGTGTTGT GGCTCTAATAGAGACATTTACCACCAAGCTTAGACCCACTACCTTGAGTCCTGGATACCTATCCATTTTCACTGCCTACA GATGGCAATGGTTTGGGGGCTTCGTGGCATTTCTCATTTACATGATCACAACCTTTGCCCTTTATGTTCCTGATTGGAGT TTTGTAGATCATGTTCATGGCAATGAACCAAAGAGATACACAGTGATATGTGGCATGAGAGGGCACCTAGGACCTGCATG TAATGCTGTTGGGTATGTGGATAGGCAAGTTTGGGGGGTTAACCATCTTTATTCTCAGCCTGTATGGGCGCGCCTCAAGA TTTATTTTTTATTTGCAGGCATGCACGTTCAGCTCTCCAAGTACAGGTCCTTTTCACAAAGATGCTCCCAGTTGGTGTCT TGCTCCCTTTGA
Protein sequence (LotjaGi1g1v0686700.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MILVDDAGEAYPRIDHSPWNGCTLADFVMPFFLFIVGVAIALALKRIPKIKDAVKKIILRTLKLLFWGIILQGGYSHAPD DLAYGVDMKFIRWFGILQRIALVYCVVALIETFTTKLRPTTLSPGYLSIFTAYRWQWFGGFVAFLIYMITTFALYVPDWS FVDHVHGNEPKRYTVICGMRGHLGPACNAVGYVDRQVWGVNHLYSQPVWARLKIYFLFAGMHVQLSKYRSFSQRCSQLVS CSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 221 | 221 | 9.4E-137 | – | |
| PANTHER | 1 | 221 | 221 | 9.4E-137 | – | |
| Phobius | 1 | 26 | 26 | - | – | |
| Pfam | 24 | 116 | 93 | 2.3E-6 | ||
| TMHMM | 27 | 44 | 18 | - | – | |
| Phobius | 27 | 45 | 19 | - | – | |
| Phobius | 46 | 56 | 11 | - | – | |
| Phobius | 57 | 78 | 22 | - | – | |
| TMHMM | 57 | 76 | 20 | - | – | |
| Phobius | 79 | 89 | 11 | - | – | |
| Phobius | 90 | 114 | 25 | - | – | |
| TMHMM | 91 | 113 | 23 | - | – | |
| Phobius | 115 | 134 | 20 | - | – | |
| TMHMM | 134 | 156 | 23 | - | – | |
| Phobius | 135 | 156 | 22 | - | – | |
| Phobius | 157 | 207 | 51 | - | – | |
| Phobius | 208 | 225 | 18 | - | – | |
| Phobius | 226 | 243 | 18 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0686700.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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