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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0690800 |
| Transcript ID | LotjaGi1g1v0690800.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cytokinin riboside 5'-monophosphate phosphoribohydrolase; TAIR: AT2G37210.1 lysine decarboxylase family protein; Swiss-Prot: sp|Q8L8B8|LOG3_ARATH Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3; TrEMBL-Plants: tr|I3SZZ5|I3SZZ5_LOTJA Cytokinin riboside 5'-monophosphate phosphoribohydrolase; Found in the gene: LotjaGi1g1v0690800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:125893433..125896096) extracted from Lotus japonicus Gifu genome v1.2.
ATACCTGGCACTGTTGTCATATTCTGTTTTTTTTCTTTTGCAAATAAACTATTTTTTTGTTAAAAAAGTGATTTTTTTTC TCATTTGATTTGGTATCCTCTTGCAGCTAACTGGTGAAACAGTGGGAGAAGTGAAGGCTGTGGCAAATATGCACCAGAGG AAAGCTGAGATGGCTAAGCATTCAGATGCCTTTATTGCCTTACCAGGTTAGCCTTCAAATAGTGAATATGTTTGTAAGTT CTTCTACGATTGATTCTATAGGTGAATAAATTTTTAGGTTTCATATTTGATTATGAGAAAACAGAACATGATAATGATTT CTTACGCGTTAGAATCAGATGCACACCAACATTAAAATACTAGTGTCTTTGAACAAAAGCTTTCTAGTTATAGCGTGTAG TAATGACCATATCTCAGTGTCGGATTCTTTACTAGAAGGCTAAAAAGCATTTTTGGCCCCTGATATTTCAAGTTTGTGCA AATTCTGCCCCTATCTATTTTTGTCGATGTTTCTACCCCTCATGTTTTCAAACAGTGCACCGTCTACCCCTGACGGAGGG GTAGACGATGCACTGTTTGAAAACATGAGGGGTAGACAATGCACTGTTTGAAAACATGAGGGGTAGACGATGCACTGTTT GAAAACATGAGGGGTAGAAACATCGACAAAAATAGAGTAGAGGCAGAATTTGTACAAACTTGAAACATCAGGGGCCAAAA GTGCATTTTAACCTTACTAGAAATAGCTCACCGACATTTTACCTTTGATCTCTCTGGGCTACTTGTGTGTTGCTTTTAAA CATTGTTTTGTTTGCAAAAGTTGATTTACAAATAAATTAATTAAAAGTTTGCATAACCTCTATATTATTGAGAAAAGAAA AGTTAATCTAAATATATTCGAAAAAGTTCTTAGTCCAAAAATCTTTGATGACTTTCTGACACACATCCCAATGCTATGAT TAGAGAGCAACCTTTCAAAGCTAGGTGATATGATCATGACATTGACCTTACTTGACCCCTTATGATAAACATTGGACTAA GAATCAGAGCTTTCTGCGGCTCTGAGCAAAACTGTGGTTGAATACAATTTTCTTTCTTCTACTTTGGTTTAAAACTTGAT GTGATTCTGCTAAGCTTCTTTCCTTTGATAGACAATAGAGGTATAGAAAGAGAACTTTCACAAAATAACGTTTACAACTA GCACCTGCAGCTGACACATAACAATTGCTTGACCCTTTTTCAAAGACTCTTACACTGGTAGTTGTTACCATCCTGATGAT TCCTGAGATATGTATTCATTGAGTACTGAAAACTAGTGACAGAGAGAGCCAGAGAGAGAGAGGCACGCAAAGACAGAGTT GTCATTCACTCTGTCACTCTGCATTCTTGGATCCCTCCTATGAAAATGGATTCCCCCAGGAGTGAGGTTTTCCCTTCACA CTGCCAAATCCATAACTACATTTGGACACAAAAGCTCATAGTACTAAGTACTACATTCACGATGCACCCAACATAGAATA GCTAATAATCCTAATTCCTAATCAAGTGGATTTTAAAGACACCATAGCTTAAGTTAATAAAACTAGACATTGAATTTTTT TCAAAGTATTCAATTGAATTTCAATTCCCTTTTTCTGCTAACATGATGTGAGCCAGTATAATAGCATGCATGTTTGGTTT CATGTTGAAACATTTTAGAATCAATTCTGTCAAGAAGCTAAAAGAGTTGAGTAAACACGTCTTGGATTCTATCCAGATCG TGAAACCAAACATGAATTAAGTAAAATTGTTCAATTAGACTTTGTCTTACCCATTTTCATCTCAGTCATGTATGGCTTAT CCTATGTTTATGTGTTTAATTTCTTGAAAAAAACTGATGGTGGTTATATGCAGGGGGATATGGGACTCTAGAGGAGCTTC TTGAAGTCATAACCTGGGCTCAACTTGGGATTCATGACAAGCCTGTAATTGACTTGTCCCATTTCACTAATAATCCATAT GATTTATCAATTTATGTAACATTTCACATCCTAATCATGCTTGGTATTCCAAAATTGTAGGTTGGATTAGTAAATGTTGA TGGGTACTTTAGCTCCTTGTTGTCATTCATTGACAAAGCTGTGGAAGAGGGGTTTATTAGTCCAAATGCCCGCCACATAA TTGTTTCAGCACCAACTGCAAAAGAGTTGGTGAAGAAATTGGAGGTAATTTTTCCTAAACTATATGCATTTTCCATCTTG TTACATGAAAACAAAGATAAAATTTTCCACTTCTGATCAGCTTGATATCCTCCTATTCCTTTTCAGTTTGATTCCAACAA TTTGAAGCAATTGTCCTATGTGAAATCACTTTCTTTGATTTCATTAGATGAGTCACATCAAAACAAAAGTTGCTCTGATT CAATACTATATAAGTAGATAATTGAAAGATTTGTAAATGAAAAAACAAAAACTTAATTTTCAAATCAATTGTATATCTAA TCTAATCAACTTTTCTTCTGCAAAATTGAACTTTTCTATATATATGAAAGTTGAAAATGAGACAATGTTGTTGTTTTTTA ATTCATAGGAATATGTCCCTTGTCATGAGAGTGTTGCTTCCAAGCTGAACTGGCAGATGGAACAGCAGCTAGCTTACCCT CAAGAATATGACATCTCAAGGTAG
CDS sequence (LotjaGi1g1v0690800.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCACCAGAGGAAAGCTGAGATGGCTAAGCATTCAGATGCCTTTATTGCCTTACCAGGGGGATATGGGACTCTAGAGGA GCTTCTTGAAGTCATAACCTGGGCTCAACTTGGGATTCATGACAAGCCTGTTGGATTAGTAAATGTTGATGGGTACTTTA GCTCCTTGTTGTCATTCATTGACAAAGCTGTGGAAGAGGGGTTTATTAGTCCAAATGCCCGCCACATAATTGTTTCAGCA CCAACTGCAAAAGAGTTGGTGAAGAAATTGGAGGAATATGTCCCTTGTCATGAGAGTGTTGCTTCCAAGCTGAACTGGCA GATGGAACAGCAGCTAGCTTACCCTCAAGAATATGACATCTCAAGGTAG
Protein sequence (LotjaGi1g1v0690800.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLVNVDGYFSSLLSFIDKAVEEGFISPNARHIIVSA PTAKELVKKLEEYVPCHESVASKLNWQMEQQLAYPQEYDISR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 109 | 109 | 1.0E-44 | – | |
| PANTHER | 1 | 121 | 121 | 6.6E-77 | – | |
| SUPERFAMILY | 1 | 93 | 93 | 2.75E-32 | – | |
| PANTHER | 1 | 121 | 121 | 6.6E-77 | – | |
| TIGRFAM | 1 | 93 | 93 | 3.6E-36 | ||
| Pfam | 1 | 90 | 90 | 4.7E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi1g1v0690800.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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