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| Field | Value |
|---|---|
| Gene ID | LotjaGi1g1v0737900 |
| Transcript ID | LotjaGi1g1v0737900.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | TatD family; TAIR: AT3G52390.1 TatD related DNase; Swiss-Prot: sp|Q6P1N9|TATD1_HUMAN Putative deoxyribonuclease TATDN1; TrEMBL-Plants: tr|I3TAK4|I3TAK4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi1g1v0737900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr1:131244027..131247085) extracted from Lotus japonicus Gifu genome v1.2.
TCAAACACTGCAGATGGCATGTTCAAGGGAATCTACAATGGCAAGCAGTATCACGTCGCAGATATACAAAATGTTTTGAC CAGAGCTTGGGCTGCCGGCGTTCACAGAATCATTGTATTCCCCTTTCCTCTATGTGTCTTCATTTTGCTTTATTAGCTAA TTCAGAAAATTAAGTAAAATTCAAGCATGGAATTGAGTTTATAAAATTGAAAGTTGAAATTGAAACCCCATTTGGTGTCA TACATAGGAATTAGGAATTGTGTTCTATCTGTGGGTGGACTATGGTTAGAACTTGCTTTTTATGTTGCAGGTAACTGGTG GGTCACTTGAGGAATCGAGGGAGGCGCTCGCAATTGCAGAAACAGATGGTTTGTCATATTACCATCATTTTCTCTTGATG ACTTTCAAATGCAGAATGTGGTTTTTCTTTTCTGTAATTTGATGATTGTTCATAGGACGCCTGTTCTGTACTGTCGGTGT GCATCCTACGCGTTGCAAGGTTGCTTCTTTTTTCCCATTGAGAACTCTTTTCCGGATTGTGGTTGGGATGGGGATGTTTT TAACTATGATTTCATCTATTGGTTCAGGAATTTGAGGAGAGCGGGGATCCAGAAAAGCATTTTCAGTCACTTTTGTCATT AGCTAAGGAGGGAATTCAGAAAGGGAAGGTAGTTGCTTTTACTATTTCCTGTATAAAACTTTCAAGTGAATGAAAGGTAT CATATTTGTCAATTAAAACTGAAAAGTGAAAACAAATAATGAAAATATAAAATGGAAATGGAAACCCAACCGGCCCTTAA TTGTTTTATACTCTTATTATTAGTGCCAAATTAGTTGTATTCCTCATTCTTTTTAACAAATAACCATCATCACGATATGT GTTGTTATCTCATATAGTTGCAGAACTTGTGTTCTTGTTCAGAAACTACTTTCCAAGTAGCCATTTAGAAATCTGTTCAT TCTTTTTTCTATTTTTCATATGCAAGGTGGTTGCAGTTGGAGAATGTGGATTGGACTATGACCGGCTTCATTTTTGCCCA GCAGACATTCAAAAGAAGTAAACAGACACAAGATAACTACTGTTAAATATGTGTCACTTTAGCTTTTTCTTTACCTTTAT TTTTCATAATATATTAAAGTCATTGATGAATCTTGTTTGGTGAAAGCAAGGTATTTCGAGAGGCAATTTGAATTAGCACA TATCACAAAACTGCCTATGTTTTTGCACATGCGAGAAGCAGCTGCAGATTTCTGTGAAATAGTTGAGAGAAATAGGGACA GGTGTGATTGCTGGATCTCACTATTTTGAATATTCAAATGATTTTGCTTTAATGTGTTTCTTGTTTATCTTACTGATAGG TACACATGGTTTAGTTAGTTAAGTGAGGGAGTTATCATATAATTAGATAGTTAGTTAAGAGGGTTAGTAAGGCTTGTTGC CTATAAATAAGATAGGGTTAGAGAACATTAGTCATCTTGGTATTCATTTGGAATTTGGTTTAGAGAGAGAAGTGGTTCTC TTTCTAGGGTTAGGGAGGGTGTTTGGCATCTCTCTCATGTATCTTCTCTGATTCCCAAATTGGGAATTAGGGTTCTTTTA CAGAAATAGAAAGAGTTCTTGGTTGAGTTCTATCACTTACCATTCTATCTATTTCAAGAAATGAACTTAGTTGCGAGGAT TTTAAAGTATTTTGCCACCTTGGTTATGTTGTTTCAGCTTTAAACTTCAGAAATTGGGAGAAAAACAGATATGAAGTGTG CATTATGCGTCGGGAACAGTTCATAGGTTGGGTTGCATGGAAATGCTTATAAGATCTTTTCAAACTCTTAAGCCTTAAGC TATCGTTTGAAGTGATAAAAAGTTACCTTGTGGTGTTGCTAGTCCATGATAATACAATAATTAGATGCAATTAAGAGATA GATAACCTTGAGGTCATTTCTACCTTGTCAATGTTCCTCATGCCTAATTTGTACTCCCTTCAATATTAACATAAAAGTGC ATTTGTTTTATTTCTTTTATTCGATGGCATAATCACTTCGAGATGTAAAATAGACTAACCATGTCTACTTATATGACAGG TTTACTGGTGGAGTCGCCCATTCATTTACTGGTAGTAAGGATGACTGCATTAAGCTTCTCTCATTTGATAAAATGTATAT TGGTAAGTCCATCTTTATTATGTTTGCGAACCTATATCAAGTCACACAGGTCTCCATATTTCGTCTTTGGCTTTCTGAAA ATATAACCACCGATAAATTTTTGTTGTGCTAATTTCCTTGACATAAGAACATACTTTGGTAGCTTTATGTTCATAACTGA TTTTGATGTTTTGATCTAAAAAATAACTAAAAAAAACATACGAATGGTGTATTTGTATGTAAAGGTTAATTGTGTTTCCT AAGAGGCTCTTGGTGTGTTTGAAATTTGAATATCTATTTCCTTGTTAGTTAAATTGCATAAATTTTTATCCCAGATATTG AATTGTGATAATTGAATACTCAAGTTTCGGTTAAATTTCATGAACGGTAAATATCTTTTGCGCCGTGGCAGGTGTTAATG GATGCTCTCTGAAAACAACAGAGAACCTTGATGTTGTGAAGGGTATTCCTGTTGAGAGAATGATGATTGAGACAGACTCA CCGTACTGTGAAATCAAGAATACTCATGCGGGAATTGGTTTTGTTAGATCCAAATGGCCTTCTAAGAAGAAAGAGAAGCA TGATCAAGAGTGTGTTGTCAAAGGCCGCAATGAACCTTGTTTGGTTAGGTAATTACTAATTAGGATGTTTTTGCTTTTCA CCGTGATACCTATGCCACAAGATATACAATGTGCTAATTTTTTGCCTTCATATTTTAAATAGACTACTTTCCTTGACTAA TGTCTTATGGATTGTAATGACTATCATTTTCCAGGCAAGTTCTTGAGGTGGTTGCTGGCTGTAAAGGCATAAATGACGTG GATGACCTGAGCAGAACATTGTACCACAACACTTGCAGGTACCATAGCTTGTCTTGGCTGTCAATTACAGATGGTAGTGC TCACTTATGGAATTATTGA
CDS sequence (LotjaGi1g1v0737900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTCAAGGGAATCTACAATGGCAAGCAGTATCACGTCGCAGATATACAAAATGTTTTGACCAGAGCTTGGGCTGCCGG CGTTCACAGAATCATTGTAACTGGTGGGTCACTTGAGGAATCGAGGGAGGCGCTCGCAATTGCAGAAACAGATGGACGCC TGTTCTGTACTGTCGGTGTGCATCCTACGCGTTGCAAGGAATTTGAGGAGAGCGGGGATCCAGAAAAGCATTTTCAGTCA CTTTTGTCATTAGCTAAGGAGGGAATTCAGAAAGGGAAGGTGGTTGCAGTTGGAGAATGTGGATTGGACTATGACCGGCT TCATTTTTGCCCAGCAGACATTCAAAAGAAGTATTTCGAGAGGCAATTTGAATTAGCACATATCACAAAACTGCCTATGT TTTTGCACATGCGAGAAGCAGCTGCAGATTTCTGTGAAATAGTTGAGAGAAATAGGGACAGGTTTACTGGTGGAGTCGCC CATTCATTTACTGGTAGTAAGGATGACTGCATTAAGCTTCTCTCATTTGATAAAATGTATATTGGTGTTAATGGATGCTC TCTGAAAACAACAGAGAACCTTGATGTTGTGAAGGGTATTCCTGTTGAGAGAATGATGATTGAGACAGACTCACCGTACT GTGAAATCAAGAATACTCATGCGGGAATTGGTTTTGTTAGATCCAAATGGCCTTCTAAGAAGAAAGAGAAGCATGATCAA GAGTGTGTTGTCAAAGGCCGCAATGAACCTTGTTTGGTTAGGCAAGTTCTTGAGGTGGTTGCTGGCTGTAAAGGCATAAA TGACGTGGATGACCTGAGCAGAACATTGTACCACAACACTTGCAGGTACCATAGCTTGTCTTGGCTGTCAATTACAGATG GTAGTGCTCACTTATGGAATTATTGA
Protein sequence (LotjaGi1g1v0737900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFKGIYNGKQYHVADIQNVLTRAWAAGVHRIIVTGGSLEESREALAIAETDGRLFCTVGVHPTRCKEFEESGDPEKHFQS LLSLAKEGIQKGKVVAVGECGLDYDRLHFCPADIQKKYFERQFELAHITKLPMFLHMREAAADFCEIVERNRDRFTGGVA HSFTGSKDDCIKLLSFDKMYIGVNGCSLKTTENLDVVKGIPVERMMIETDSPYCEIKNTHAGIGFVRSKWPSKKKEKHDQ ECVVKGRNEPCLVRQVLEVVAGCKGINDVDDLSRTLYHNTCRYHSLSWLSITDGSAHLWNY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 290 | 290 | 3.0E-112 | – | |
| PANTHER | 1 | 283 | 283 | 1.4E-150 | – | |
| PANTHER | 1 | 283 | 283 | 1.4E-150 | – | |
| PIRSF | 1 | 288 | 288 | 5.7E-84 | ||
| Pfam | 14 | 283 | 270 | 4.0E-47 | ||
| CDD | 14 | 282 | 269 | 5.99616E-80 | ||
| SUPERFAMILY | 14 | 286 | 273 | 1.09E-64 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity, acting on ester bonds | Catalysis of the hydrolysis of any ester bond. |
Expression pattern of LotjaGi1g1v0737900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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