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LotjaGi1g1v0778700.1

Overview

Field Value
Gene ID LotjaGi1g1v0778700
Transcript ID LotjaGi1g1v0778700.1
Related isoforms 3
Lotus japonicus genome version Gifu v1.2
Description Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|I3RZE0|I3RZE0_LOTJA Cysteine synthase; Found in the gene: LotjaGi1g1v0778700
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr1:135064783..135070569) extracted from Lotus japonicus Gifu genome v1.2.

CGAAGAGCCAGCTACCTTTTGGAGTTTTTTTCTTGTTGTCTACATTCATTCATTTTTTATTTGAAACAGTCTACATTCAT TCATGAATTTCCAACGAGTTTGTCAAATTGATAAAGATGAATTAGACGTGCAAAAGATGGCAATAACATAATACTGCTAA TCATTCCAGCCAAATCACACAAGAAAACAAGCGAAGTCCCTCACACACAGCACATAGTCACACACATTGTTTTCCTCGTC TTCTTCATTATATAACTCTTCTCAGCGTTCTCTGCCTGGATAAGGTTCTTGCTGTTCTGTTCTGTTCTCTTGAGGTTAGC CATTCATTTCCCTACTCACTACTTTCAATATTTTATGCTGTTTATATGTTTTGACTCTTTGAATTATCTTCAATTCACCT TAGGGGTTACTGAACTCTGCTTACCTTATTGATTGCTGCCCCAAAATTTCTTTTCTTTCTATTTTTATATATATGCTTTT CCTGCACCGATCACCACCTGTTTGTTATATAGCATGTTTGAATCAGTTTATTTTTCTTCAGAATTAATTCTGGCACCCAG AAGCCACATAAGATTCTTCGCATAATTGATTTTGACTTTAGAATCAATTGTAGAAGGTTTTCCAAACAGGTTATTTATGA GCAAATTTTATCTTAGTGGAAATTCAATTGTTGATCATCACAGGACACATATATTACATATGTCAACTCTGCAACTCAAC TAATCCAAGTCCAGACAATGAATTATATTTATAATTATCAGGATTTTTTTGTCTTTCTGAATTCTGCTTGTATTTGCAGA ATTGCAGTGCTTTGCTGAAAATGGCGGAAGAGAAGACTACCATCGCTAATGATGTCACTGAAGTAAGCCATATTCAGTTA TGTTCTTTTTTGTCTCTGTGATGAACAATCTAGCTTAGTTACATGTGAATTCGTTTATGAAATGTGCAGTTAATTGGCAA CACTCCATTGGTATATCTCAACCGTATCGTAGATGGCTGTGTTGGTCGAATTGCTGCTAAGCTGGAAATGATGGAACCCT GCTCTAGTGTCAAAGACAGGTATACAGATTTCTCCATTCTTATATTGGAAAGTGAGCTAGCAAATTGGCGTCTAACCAGC GTCTAACCATTTAGGTTGTGTTTGGTTAAATAACTTAATTGAACACTTATAGAGTATTTTTTGAGAAACTTATTGAAATA AGCTCAAAATAGATTATAGATAAGTATAAGCACCTGCATAAGCTAATTTGACCAGCTTATGAAATAAACTCAAAATAGCT TATAGGTCATAAGATATTTTTCAGAAGTTTACCCGAACATAAAATGCTCATACAATAAGATAAGCTCAAATAAGTTATTT CAAACGCAGCCTTACTCTTGATTTGCTGGACTCTGAATCTTCACACCCTTCAGAATAAATGCCTAGATTGATGGAAGTTT TGGAATAGAAGTTATTGAGTCCCAATTCGTTTATCTGTCTAATGCAATTATAAGTAATAAGTATATAAAAAACTCCTTTT TATTAATGTATAATTTTATTTTCCTACAGGATAGGATATAGCATGATTGCAGATGCTGAAGAGAAGGGGCTCATTAAACC GGGTGAAGTTAGTTCTTGTTTTGGATTGTCCTTTCTTTCTTGTAAATTTGAATTCATGTTGAAGCTTCCTTATACTAGTT CTTTCTGATTTTGAGGGTATATTGTATGAGTAGCAGTTAATTAATTCTGTTGATTCTAACATCCTATTGCTTTCAAACTT TCAAACGTCTAAACAGGAGTAGTATGTAGGAAACTTGATTCATGTAAGGCTGTTACCGATTACTTGGGTATTGATATGGT TTGTTGTTGATCAATTTGTAGAGTGTCCTCATTGAGGCTACGAGTGGAAACACTGGCATAGGTTTGGCATTCATGGCAGC TGCTAAAGGTTATAAACTTATTATAACCATGCCTTCTTCTATGAGTCTAGAAAGAAGAACCATTCTTCGAGCTTTCGGAG CTGAGTTGGTGCTCACAGACCCAGCCAGGGGTATGAAGGGAGCTGTTCAGAAGGCTGAGGAGATACGGGAAAAGACTCCC AATTCTTATATTCTTCAACAGTTTGAAAATCCTGCCAACCCAAAGGTATTTTGTGAAGGAAAATGATTCATAAACATGCG CATAGTGCAAACACCCAATATACAGCCAAAGTGAGAAAGAAAAAGAAGAGAGAAAAAAGTAATGGATGTGATATATGATG TGATGTGATAAGAAAAGAGAGATAGAGAGAAAATTGAGTGCCTGATTGTTTGGGGTCTAAGTATCAATACTGTTTGTCAA TGTGCTGTGTTTGGGGGATCAGTTGATTGAAGAGTATTTACACACTCTTTCTTGCTTCTATTTTTAGGTCCATTATGAGA CCACTGGACCAGAAATTTGGAAGAGCTCCAATGGGAAGGTTGATGCTCTTGTTTCTGGGATAGGGACTGGAGGTACAATA ACAGGTGCTGGGAAATATCTGAAAGAGCAGAACCCTGGTGTCAAGGTTAGGCTTTTAATTTTCTGATTGTATGTTAGTCT TTTCTAAATTTCCACCTGTTTTTCTGATTACTCTTTCTTTATTCTTTAGCTATATGGTGTTGAACCATCTGAAAGTGCAA TACTGTCTGGAGGGAAACCTGGTGAGTGTTGATTTTTTTATTTTTTTTCATTCATGGCAATTGTCTCCTATTGTTACACC AGCTAGAGTATTTAGAAAATGTCTTCCAATATCTTATTGTATCTCATATGGTCTCTTAGTACTAGTCTTCATATAAATGA TGATTTGTTTTCCTGTTTGATTAGGATTATGAATCTAATTAGTATAAATAGGGGTTAAGTGTTGTACACACCTCATGGTC TATTACATAATCTTTAATTTAAACCATCATTGGCAAATCTAATTCCTAGTTTCCTATGTTTAAAGGCATGTGTGCTCTGC CATTCATCATTACTACATGGATAATGCATGTGCTTAATGAGAACTTGTAAACACTTGAATACTGTGTACTTGTGTGCTTA CTTCTGAATTCAAAATGGTATCTGACTACATGACCTGGCTGCTTTTACTTGATTCCTTACCTTTGCTTCCCTCCTACAAT GACAAGAAAAAATAAATTCAAACAGTACATTTTATGGTTTAGATTAATCAAATGCCTGCCTCATTTTATGTATCTTTCCG CTGACAAATGCATGTTTGTTAAATGGATATAAGGCCCTCATAAGATCCAAGGAATTGGTGCTGGATTCATCCCTGGCATT TTGGACGTTGATATTCTTGATGAAGTTGTTCAAGTAAGCCACAAACCTTTTGTTAAGTTCTTTTGTGTTCAAATAAACAG AGATTCTCTTGATTGTAAGATAGCCTGGCGTTCTTCTATTCTTACTCCTAATATTTTTATAGCATGTTCGAATCAGATTC TATTTCCTTAGATTGAGAAGCCACTCACACAAGTTTCTCCCCATAATTGATTTTGGCTTTATAATCAATTGTATAAGGAT TTCCAAACATGCACTTAATCTTTGCAAAAGAAGTCCAATGTTGCACTAAGAATACATGCAAAATGTGACAAGAGAACATA GTGTGAGCTTACAAACAAAGCAAAATACAAATTCTAATATTTGTATGTTACTATTAAGTGTTAGACTGTTGGGAATAAAC TTTGAACTACTTCAAGGAAAATGGTACTTCAATTTTAATTAACATGAGTGTGCAATCTGTCATATCTTCTCTTTCCCCTC TGCTTGGTAAAGCGGGACTAAAACAAAAAGCTTCAATTTGAAGGCAGGAAGAAGTGAGTTAGTTGACTTAATTCACTTCA TGTATAAGAAAGTAACTTGTTTTTAACTGTTTTTGTAGGTTTCAAGTGAAGAAGCTGTTGAAACAGCTAAACTTCTTGCT TTGAAAGAAGGTTTACTGGTAAGTTCATATGGATTATAAAATGGACTCCTTAGTGGTCTTATCTCTCTTCTGTGTATTGG CTTTGCTTTGATGTATATCTTTTGGTTTGTGTGCTTTTGTGAAAGCGAAGAAAGGGGGACGCAGTGTTTTTAATGCAATT TTTTTCTATTCTAATTATATTTCAGGTGGGGATATCATCTGGTGCTGCGGCTGCCGCTGCAATTAAGCTTGCAAGGAGGC CAGAAAATGATGGAAAACTCATTGTTGTAAGTTTATCTACTTTTCATCTGGCATCATATTTTCTTTTGTTGTCAGCAGTG CTGCTTTAGGTGCAATATCAATGTGCTTAAAAGATTTTTGAAAAGTTGTTTCTTTAATTGCTGATCATTAGAAGAAGCTT CTGGCATTAGCTATTTGAGGTTTCATTGCTATAGATGCAGTTAATGGCTCTAACTGCACACACAGTTGATGTCATTTTTG TAGATGTATAAGCACTTTATATATTAAGAGTACTTTAGTTGTTTTCTGATGATTGGCTGTGTGCACAACAGCAGATTTCT GATAAGCAGTATTTTCACCTGATTTTCTTGAAGCTTCCTAATAAAATGCATAATTGGAATTAAAGAGAAAATTTACTCCT TTCAATATCACTCTCTTATTATATTTACCATGTTCAATCACTAATAAGCCCATTGAATGCCTGACTAGGTGGTCTTCCCA AGCTTTGGAGAGCGTTATCTTTCATCTGTGCTCTTTGAAGCTACCAAGCGAGAAGCAGAGAGCATGGTCTTTGAGCCTTG AATCAGAAAAATCATCAATCTTTTGCTGCTTAGTCTCAGTTTTATTTTCTCGTTGGTTCTTGTGAAATAATATTATCAAC TTGCTCAAGTTGTTAGGAAGCGTGCTCATAAACATTGATTATTTAGCAGATCATGAATGCCAAGAACCGATCCTGTACTT GTATTATTTGCTAGTGTCATGATTTTCTAATGTTTCCTTGCTGAAAATTCTAATGGAGAAAAACCACTAGTTAAACCCCT GATTCATAAACTGGCACTCCAAATTCTGAAGGGCGAACTCATAACATTTGCAACATTTTCATCAACCTGCTACTTTTTTC ATGTTAATTAAGAAAAAATAACTTTACATGCGAGATAAGTTCTTGAAATCTAATAAGGAAGAGTTTTGAGACTGTGGATC TAGGAAAAAGCAAGAGTTTTCTGAAATGACTTACATATGAGAGCATAATCAAAGTCTCGCCTTGATGGATTTACCCATCA AACCTGTCATTCAGATAGGAATAGAATCACAATTGTTGTTTCTTTTCTTCCATGTTCACTAGATATGGGGTTACATGTCA CTTTACGATTACATGCTACCATTGTTTTGAAGAGTTAGGTAGGATGCTCCTTAAAAATAATGATCAAACCGTCCAATTGT TCGAGAAGCTGAACCAAGAAAACTAAATTACTTTGTTGAAAAAAGAAGAGCCTCATGCATTTCCTGAATCAGTTAAAAGG AAATGACTTTAGCTGGCAATGGAAAGTGGATGTTTCCAACTCTATTCATTATGTCAAGAAAGTTGAATCAGATTACATGA TATATCAAAGCTTGAATGTGTCATTGTTTAAGTAGACATAATCGGTGTGGGACTAACTTATTTAGTATGACATACAAAAA ACTCATTTGAGCCTGCATTTTTCACCCTCATAAATTTCCTAAATCAATCAGAACAAAATGAATTTACGTGCCAATTGTAT AGGAGACCATCAAATGTATCACGAGATGATAACTAAGTAGGACTAAAATGGGTAGTGCGAGAGAAAGTAATGTTTTGCTG TCATCTAGTTTGCAATCATTATTCTCA
Download Genomic Sequence

CDS sequence (LotjaGi1g1v0778700.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCGGAAGAGAAGACTACCATCGCTAATGATGTCACTGAATTAATTGGCAACACTCCATTGGTATATCTCAACCGTAT CGTAGATGGCTGTGTTGGTCGAATTGCTGCTAAGCTGGAAATGATGGAACCCTGCTCTAGTGTCAAAGACAGGATAGGAT ATAGCATGATTGCAGATGCTGAAGAGAAGGGGCTCATTAAACCGGGTGAAAGTGTCCTCATTGAGGCTACGAGTGGAAAC ACTGGCATAGGTTTGGCATTCATGGCAGCTGCTAAAGGTTATAAACTTATTATAACCATGCCTTCTTCTATGAGTCTAGA AAGAAGAACCATTCTTCGAGCTTTCGGAGCTGAGTTGGTGCTCACAGACCCAGCCAGGGGTATGAAGGGAGCTGTTCAGA AGGCTGAGGAGATACGGGAAAAGACTCCCAATTCTTATATTCTTCAACAGTTTGAAAATCCTGCCAACCCAAAGGTCCAT TATGAGACCACTGGACCAGAAATTTGGAAGAGCTCCAATGGGAAGGTTGATGCTCTTGTTTCTGGGATAGGGACTGGAGG TACAATAACAGGTGCTGGGAAATATCTGAAAGAGCAGAACCCTGGTGTCAAGCTATATGGTGTTGAACCATCTGAAAGTG CAATACTGTCTGGAGGGAAACCTGGCCCTCATAAGATCCAAGGAATTGGTGCTGGATTCATCCCTGGCATTTTGGACGTT GATATTCTTGATGAAGTTGTTCAAGTTTCAAGTGAAGAAGCTGTTGAAACAGCTAAACTTCTTGCTTTGAAAGAAGGTTT ACTGGTGGGGATATCATCTGGTGCTGCGGCTGCCGCTGCAATTAAGCTTGCAAGGAGGCCAGAAAATGATGGAAAACTCA TTGTTGTGGTCTTCCCAAGCTTTGGAGAGCGTTATCTTTCATCTGTGCTCTTTGAAGCTACCAAGCGAGAAGCAGAGAGC ATGGTCTTTGAGCCTTGA
Download CDS Sequence

Protein sequence (LotjaGi1g1v0778700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MAEEKTTIANDVTELIGNTPLVYLNRIVDGCVGRIAAKLEMMEPCSSVKDRIGYSMIADAEEKGLIKPGESVLIEATSGN TGIGLAFMAAAKGYKLIITMPSSMSLERRTILRAFGAELVLTDPARGMKGAVQKAEEIREKTPNSYILQQFENPANPKVH YETTGPEIWKSSNGKVDALVSGIGTGGTITGAGKYLKEQNPGVKLYGVEPSESAILSGGKPGPHKIQGIGAGFIPGILDV DILDEVVQVSSEEAVETAKLLALKEGLLVGISSGAAAAAAIKLARRPENDGKLIVVVFPSFGERYLSSVLFEATKREAES MVFEP
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR10314
1 322 322 3.5E-204 –
PANTHER
PTHR10314:SF97
1 322 322 3.5E-204 –
SUPERFAMILY
SSF53686
8 313 306 1.96E-105
IPR036052
TIGRFAM
TIGR01139
13 311 299 6.8E-141
IPR005859
TIGRFAM
TIGR01136
13 311 299 2.9E-135
IPR005856
Pfam
PF00291
13 298 286 1.2E-70
IPR001926
Gene3D
G3DSA:3.40.50.1100
14 306 293 1.4E-125
IPR036052
CDD
cd01561
17 307 291 1.81279E-150 –
ProSitePatterns
PS00901
38 56 19 -
IPR001216
Gene3D
G3DSA:3.40.50.1100
50 152 103 1.4E-125
IPR036052

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004124
Molecular function Cysteine synthase activity Catalysis of the reaction: O3-acetyl-L-serine + hydrogen sulfide = L-cysteine + acetate.
Subterm of
GO:0006535
Biological process Cysteine biosynthetic process from serine The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi1g1v0778700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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