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IPR001216 is a Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site.
<p>Cysteine synthase ([ec:4.2.99.8]) (CSase) is the enzyme responsible for the formation of cysteine from O-acetyl-serine and hydrogen sulphide with the concomitant release of acetic acid [[cite:PUB00001662]]. In bacteria such as Escherichia coli, two such forms of the enzyme are known (genes cysK and cysM). In plants there are also two forms, one located in the cytoplasm and the other in chloroplasts.</p> <p>Cystathionine beta-synthase ([ec:4.2.1.22]) catalyses the first irreversible step in homocysteine transulphuration, the conjugation of homocysteine and serine forming cystathionine. Like Csase it is a pyridoxal-phosphate dependent enzyme [[cite:PUB00002710]].</p> <p>Both enzymes are evolutionary related. The pyridoxal-phosphate attaches to the lysine residue found in the N-terminal section of these enzymes; the sequence around the lysine residue is highly conserved.</p>
This description is obtained from EB-eye REST.
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Cysteine biosynthetic process from serine | The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine. |
Transcript | Name | Description | Predicted domains | Domain count |
---|---|---|---|---|
– | PREDICTED: cysteine synthase-like [Glycine max] gi|356557036|ref|XP_003546824.1| | 9 | ||
– | Cysteine synthase [Glycine max] gi|351727525|ref|NP_001235628.1| | 13 | ||
– | Cysteine synthase [Medicago truncatula] gi|357507415|ref|XP_003623996.1| | 14 | ||
– | Cysteine synthase [Glycine max] gi|351727525|ref|NP_001235628.1| | 13 | ||
– | Cysteine synthase [Medicago truncatula] gi|357508933|ref|XP_003624755.1| | 13 | ||
– | Cysteine synthase [Medicago truncatula] gi|357508933|ref|XP_003624755.1| | 14 | ||
– | PREDICTED: cysteine synthase-like [Glycine max] gi|356573072|ref|XP_003554689.1| | 13 | ||
– | PREDICTED: cysteine synthase-like [Glycine max] gi|356557036|ref|XP_003546824.1| | 13 | ||
– | PREDICTED: cysteine synthase-like [Glycine max] gi|356557036|ref|XP_003546824.1| | 9 | ||
– | OAS-TL4 cysteine synthase [Glycine max] gi|351727959|ref|NP_001235131.1| | 14 | ||
– | Cysteine synthase [Glycine max] gi|351724467|ref|NP_001235267.1| | 13 | ||
– | Cysteine synthase; TAIR: AT3G61440.1 cysteine synthase C1; Swiss-Prot: sp|Q1KLZ2|CAS1_MALDO L-3-cyanoalanine synthase 1, mitochondrial; TrEMBL-Plants: tr|I3S9T9|I3S9T9_LOTJA Cysteine synthase; Found in the gene: LotjaGi1g1v0478000 | 15 | ||
– | Cysteine synthase; TAIR: AT3G03630.1 cysteine synthase 26; Swiss-Prot: sp|O22682|CYSK4_ARATH Probable S-sulfocysteine synthase, chloroplastic; TrEMBL-Plants: tr|A0A0B2RJ41|A0A0B2RJ41_GLYSO Cysteine synthase; Found in the gene: LotjaGi1g1v0650300 | 16 | ||
– | Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|I3RZE0|I3RZE0_LOTJA Cysteine synthase; Found in the gene: LotjaGi1g1v0778700 | 14 | ||
– | Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|I3RZE0|I3RZE0_LOTJA Cysteine synthase; Found in the gene: LotjaGi1g1v0778700 | 14 | ||
– | Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|I3RZE0|I3RZE0_LOTJA Cysteine synthase; Found in the gene: LotjaGi1g1v0778700 | 14 | ||
– | Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|I3RZE0|I3RZE0_LOTJA Cysteine synthase; Found in the gene: LotjaGi1g1v0778700 | 14 | ||
– | Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|Q8W1A0|Q8W1A0_SOYBN Cysteine synthase; Found in the gene: LotjaGi2g1v0455300 | 14 | ||
– | Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|A0A0L9TAD9|A0A0L9TAD9_PHAAN Cysteine synthase; Found in the gene: LotjaGi2g1v0455300 | 14 | ||
– | Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|Q8W1A0|Q8W1A0_SOYBN Cysteine synthase; Found in the gene: LotjaGi2g1v0455300 | 14 | ||
– | Cysteine synthase; TAIR: AT3G04940.1 cysteine synthase D1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|I1MJD2|I1MJD2_SOYBN Cysteine synthase; Found in the gene: LotjaGi3g1v0133300 | 14 | ||
– | Cysteine synthase; TAIR: AT2G43750.1 O-acetylserine (thiol) lyase B; Swiss-Prot: sp|O81155|CYSKP_SOLTU Cysteine synthase, chloroplastic/chromoplastic; TrEMBL-Plants: tr|A5YT88|A5YT88_SOYBN Cysteine synthase; Found in the gene: LotjaGi4g1v0067900 | 15 | ||
– | Cysteine synthase; TAIR: AT3G04940.1 cysteine synthase D1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|I1NIU6|I1NIU6_SOYBN Cysteine synthase; Found in the gene: LotjaGi5g1v0215100_LC | 10 | ||
– | Cysteine synthase; TAIR: AT3G04940.1 cysteine synthase D1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|I1LBI3|I1LBI3_SOYBN Cysteine synthase; Found in the gene: LotjaGi5g1v0215200 | 14 | ||
– | Cysteine synthase; TAIR: AT3G04940.1 cysteine synthase D1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|I1LBI3|I1LBI3_SOYBN Cysteine synthase; Found in the gene: LotjaGi5g1v0215200 | 14 | ||
– | Cysteine synthase; TAIR: AT1G55880.1 Pyridoxal-5'-phosphate-dependent enzyme family protein; Swiss-Prot: sp|P87131|CYSKL_SCHPO Cysteine synthase 2; TrEMBL-Plants: tr|I3SSP2|I3SSP2_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0124300 | 13 |
A list of co-occurring predicted domains within the L. japonicus gene space:
Predicted domain | Source | Observations | Saturation (%) |
---|---|---|---|
cd01561 | CDD | 1 | 3.85 |