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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0168600 |
| Transcript ID | LotjaGi2g1v0168600.1 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | T-complex protein 1 subunit gamma; TAIR: AT5G26360.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q84WV1|TCPG_ARATH T-complex protein 1 subunit gamma; TrEMBL-Plants: tr|A0A1J7HGR3|A0A1J7HGR3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0168600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:58077584..58083969) extracted from Lotus japonicus Gifu genome v1.2.
AAAATATTTTGAAAAGCAAGAAGCAAAATAACTTGAAAGTAAATAAAAGGTGATCCAGGGTTCCAGGGTTTTCTAGCTCA TTTTGGCGGAAAACCTGAGTAGTGGACAAACTGCTCGCTCGCTACACTCACTTCTCCAAACCGATACTGTTTCCTTCCTC CGCCGCCAGCCACCGCATCCTCCGCCGCTACCACTCCCGATCGAACATTCTACGCCCAGGTTCGCTCTCTTCTCTCTGAT CCACTCTCGCTCGAACCGTCGTTCACTGCATCGCCACCCTAGCTCTGATTTAGGGTTTTGTTTTCGATTTACTGTTAACA TCTTCGTTTTGTACGATTTCTTCCCTCGGAAAATGCTTGAATCTGCTGCTACGTTCGGTTCGGTGGAAACACCGTGTTGT CGCGGTATTTTGAGTTTTGAATAACTTGCTCCTGTTTTGAAAAATGTGCAGTGGATCTCCAATTTTGGCAAGCATCTTCA GAAGCGCTTCCTCTGTTGCTGGATTCAGTTTTTGTGTGGAAAAGAGAAAACTCGTTCGGAATATCTTGAAACCTAGAAAT CATGCATGCGCCAGTTCTAGTTCTCAGTAAGTTCTATCTCTTCTCTTAACAAATTTTTAGTTTTTTTACGCTTTTCATTG ATTTTAGGTAATTGGGTGTTTGGATCGAGTTTCTATAATTTGCTTGTTTTGATTATGTTTATTATATTTTTGAATGTTTT GTGTATGTTGTTCCATTTGGACATGCTTTTTTTGTATTGATTGACTCATTATAATCCATGGACAGAGGACTCTTTGAAAC GTGAGTCTGGAGCAAAGGTGCACCATGCTAATATTCAGGCGTCTAAGGTAAAAACGCCTATTTATTGATTACCAACTTAG GAGTACATGCTAATGTTTGTTAATATTCATTCGGTGTTTGTAATCTTAATATGGATAATGACTTCCAGGCCGTTGCTGAC ATAATCCGTACCACATTGGGACCCAGGTCCATGCTGAAAATGCTTCTTGATGCTTCGGGAGGTTAGTGTTTTCCTGTCTC AAAAGTCAAAACAAGTTAGCCCTTGCAATAGTAACATGCTGAGAGAGCAATTATTTCCTGATTTCCATACAGTGTCGTGG GTAATTGTGAGCTGAAATAATTGATGTCACTTATAATAAAATTGCTTTTGGAACTATTTATGTTTCTATGTTAACTTTAG TTCCTGGTTAGAAATTGCCAATTTATTAGCTTTTAGCATACCCGGTTTATTAGATCCTTGCTTGTGTTCTCAAGTATTTA TCTTATGCCATATTACTTTTTCTTTTAAATTAACAGGAATCGTAGTGACTAATGATGGGAATGCTATCTTACGTGAATTA GATGTTGCTCATCCGGCTGCAAAGGTACTTGTCTCTCTTGCTTCATTCAGTTGATATTGCTTGTGTACATGTATGGTTCT AAACACTGCTTTCCTAACAGCAACTTGTAAAAGCTCCATTTTCTGATTTCCATTGAATATTTGTGGTTTAGTTTCCCTTT GTTTTGAAACTTTCTAATACTGATCTCTTATTGGGATGGCCACAGTCTATGATTGAATTAAGTCGTACTCAAGATGAAGA AGTAGGAGATGGAACAACATCGGTCATCATTCTTGGTATGTTTTTAGTGTGTGTATATATTAATTTTATTTATTTACTTT TTCATGTGCTAGCAAGTTCTAGAGTTAGTTGCGTTCTAGGAAGCATGGACACTTTGTAGCTGTGCTGTGTTGCACATGTA TTTATCTCAGCCACTCCTAGTTATAATTTATAGCTTGTTTTCACATTTATACCAGTACATATGGAAATATCTTGAAAAAT TAGATACAACATTGGCATTATATTATGCCTAACACCTCATTCTGACCTTCAAAATACTTTAATGTTCATCCTTATTATTA GTTTTTCCTAACTGTGTTATATTGTAGTCATGTCAGTATCACGGTCTATAAACTTGAAAACGTGCCAGTGTCCCTGTATC AATCCCGTGTTATAGCTGTGTGTCCCAAGTCATATTTCTGCTTTTGAGGTTGAATTGTTTACTGAATGGAAGATCAGATG TTTACTTGATATATTGGGATTTCCTTTCTCCCAATTTCAATATCTTGTATTTTTTGTGCAGCTGGTGAGATGCTCCATGT TGCTGAAGCATTCATTGACAAAAATTATCATCCCACAGTTATTTGCCGAGGTAATTCAATAGTATTAGTCAGTGATTCTC TTTTAAAAGGGTATACTGTATATTATGCCTAATACAATTATGTATAATCTGTAGCATATAACAAAGCTTTGGAGGATGCT ATTGCTGTTATTGACAAAATTGCAATGCCAATTGATGCTCAAGATCGTAAGTTCTATTTCTTTGACTGGTTCCTTTTAGA TTACTATTATCTTCCTCCTAACAATATACAAAAGTTCATAGTGAACTGAACTCATTCAGTCATTTATTCCCGTTTCCATT GGTTTGTTGAGGGATCCTGGGTAGGTTGTCTATATAGTTCCACATTGGAATTGAGTTGCGGCAAAATCTCCTAGTATTTT ATAGTAATTGAGTCATGTGTAGAAACAACACATTACCGATCCAGTAAACTTCTTGACATGTTATTTTAATGCTATTGGTA AATTGAACTGCAGGGGCTACAATGCTGGGGCTAGTAAAAAGCTGCATAGGCACCAAATTCACTGGTCAATTTGGGGATTT GATTGCTGTGAGTATATTTCTCAGCTTGATTTCCCAATTGATATCGTTTTATGTTTTCAAATATTTGAACTGGATGTTTA ATTTGGCAATGTTTATTATCAAATTCTTCAATAAAAACTTTCAATATTTCGGATGGGAGTGTGGCTGTTGTCATCTGTGA AGTGCTTTTAAACCAGAAATTATATTTCTACAAAAGCATGAGTCTACAAAACATGAGTTTATAATGTACATGTTCACATG TTATGGTTTTTATTTCAACAAAAAGTATGAGTTGATGGTATTTTAATTAATCCAATGTACAAATTTATTGTTCATGTTGT GACTATTGGCATCTAGACAAGCATGCTCACATTATCTTCATTTAATTAGATGGGCCTCTGTTGTTAAGTAGACAATACAT CTATAAATTCATCGCCCTAATATAGTTTCTTCCACTACCAAGTACACACATCATTTCAGATTTTGTTCTCCAGTTTTGTT CATTTCTTTTTGATGAATTGATAGCTCTAAAATAGTTTCTTGATTTCTTTCGCTATGAAATTCACTCATTATTTCAGCTC TTGTTCTTCTTCAGTTCTGTTCATTTCTATTTGAGTGAACAGATTAATCCCTAATGCTACTGCCTGTACTGATAATAATG ACCTTTTTGCAATTATGTAGCATATTTAGATTTGTTTAATGATGTATAATATGTCCTTCCTTGGTTAATTTTCCAGGATT TAGCTATTGATGCTACTACAACTGTAGGCGTTGATATTGGCCAAGGTTTGAGAGATGTGGATATTAAAAATTATATTAAG GTTGAGAAGGTACCTGGTGGGCAGCTGGAGGATTCAAGAGTTCTTAAGGGAGTTATGTTTAACAAAGATGTAGTTGCCCC TGGCAAAATGAGGAGAAAGATCGTTAACCCACGTATCATTCTCCTTGATTCTCCTCTTGAGTATAAAAAGGGTGAAAACC AAACAAATGCTGAACTGCTTAAAGAAGAAGATTGGAGTGTCTTATTGAAGATGGAGGAAGAATACATGGAGGAGCTCTGC ATGCAGATATTGAAGTTCAAACCGGACTTAGTAATTACAGAGAAGGGCCTTAGTGATTTGGCATGCCATTATTTCAGCAA GCATGGAGTTACTGCAATCAGGAGATTGAGGAAAACTGATAATAATAGAATTGCCAAGGCATGTGGTGCTGTTATTGTGA ACAGACCAGATGAATTGCAGGAGTCTGATGTTGGTACTGGTGCAGGGTTATTTGAAGTTAAGAAAATTGGAGATGAATTC TTTGCATTCATTGTTGATTGCAAAGACCCCAAAGCTTGTACTGTACTATTAAGGGGTGCTAGTAAGGATCTCTTAAACGA GGTTGAAAGAAACCTACAGGTATGTTGTTGATATTGATATATATACTAAAAGACCAATCAGATTTTGTTCAAACAGTTTT CTGAACCTTGTTCCCATACCAGGATGCTATGTCTGTTGCAAGGAACATAATCAAAAATCCAAAGCTTCTTCCTGGAGGTG GTGCTACTGAGTTTACTGTGTCAGCTACTTTGAAACAGAAGAGTTCATCTATTGAAGGGATAGAGAAGGTGAGTCTATTA CCACTACTTTTTTTGTTTTAGTGTTCACTATTGTTTCAATGAACCACTTGCTACTACATATTAAGTAGGTTCAGTTCAAT CTCTTGTGTAGTGCAGTTGTTTATATTTGTTCTCACTCAATATTCTTGTTGACTGACAGTGGCCGTATGAAGCTGCTGCA ATTGCTTTTGAAGCTATTCCACGAACTTTAGCACAAAATTGTGGAGTAAATGTCATCCGGACTATGACTGCACTACAAGG AAAAGTGAGAATAGTTTGCCAGGTTTTATTGTATATGACTGTTCTTTTTGAAGTCTGATCTTGCTTAACAAAATATTCCT GAAAATTGTAGCATGCAAATGGAGAAAATGCTTGGATTGGCATAGATGGAAATACTGGTGCCATTGCTGACATGAAAGAG CGCAAGGTACTTTATTTTATTTTAGTAAGAACAGTTATGTATTTTTATTCCATTTTGCCCAGTTCTGTTCCCCCCACCCC CTGGAAAATGTAAATTTTTAATCTTGTCTTGATTTATTACTGTACGCATTCTCAGTTGTATGAGCATGTATTTCTGCAAT TGAGCTCTGATTATGTTTTGTTATAATATGGTGTTAGATCTGGGATGCCTATAATGTTAAGGCACAAACGTTTAAGACCG CCATTGAAGCTGCTTGCATGCTTTTGAGGATTGATGATATCGTGAGTGGGATCAAGAAGAAACAGGCCCCTGGAGCAGGT CCCTCAAAGCCCAAGGTTGAGACTGAGGCAGATGCTGACGGCGAGCAAATCCTTCCCGACTAAAAAACATAGTTCACCTG TCATTGTTTTTTGACACAGTTGAAAATTTGCTAGGTTCTTGTTCATCTTTAAAAACTATATGCATGTTCTTAGAAGTTTT GGTTCCTTAATTGGTCTGGTGTTTGTGCCTTGTATTGTCTGCAAAAGCTAGTTATGAACTTTGTTGATGTTACAAATGGC GTTTGCTTAATCTGAGTGTCCAGAGTCCAAATTTTGGGATTGTGCTAGGGTTAGGGTTTAAATGATTAGTTTTCCTCACT GAAGGTTGTTTGTTGAGCTGTATCTTGATTCTCATGCTATTCATTTGAAATCGTGTTCTACATCGTACATCGTGAATATC TGATCACGCCCTTGGAATATTTTCCGGTAAGTTGGAGTAGAGTTTATATTATTTATGGTTAATATAATTTTTATGTTATT TGAAGTTTCACTCATGAGGAGATATGGAATTCCTTCATCAAACTCCTTTCTCAAGATGATGTTTTTTTGAAAGTCTCACG ATGATGTTGAAACTATATTCTATTAATTTTCTAATATTTAGATTAGTTCAAGCTTATTCTTGTGGATGACATTGGGGGAA AATAGCTTGCTTCTTCCCATTCCCCCATTTCCTTTATAATGCATTCATGGTTGATAAGTTGACGACCCTGCTGAATTTCT CCTTTGAAGTTCCTTGGTTAAGCCAGTGCTCTGCCCAAAACAACTTAATTTCCTTCTATTTTCCGAACAATGTTATCATT GAACCAGCTTCCTTCCATCAGACTGATGGAGTATTCACAGCTCCAGGTTATCCTGAATTCAAGTCCTTTCATCAGACTGA TGGAGTATTCACAGCTCCAGGTTATCCTGTACCAAGGGCCAATTTGAGGATCCTGTACCAAGGGCCATCGTTATCACCTC TAGTTGCCTAGGAGGGTTTTTTGGACCAAACCCCACTCTTTAATACCCAAATCTTCTCCCTTCTTTTGGTCTACAAACCT TCTCCCAGTTAATCCATGCTTCTGTTTCCTCTCCTTCCACTCCACCCGATAGAGTTTCTCATGATTGTTTTGCATACTAT GATAACCCATATAGGAACTTTAAAAAATGACAAATAGAACAATGGAAGAGATTTTTTTTAGGTAAGCAAAAATGATATAA ATAGGGAAGTACAATGGAAGAGATGATAGTACACTTTTTATCAAGCAAATTCTGCCTCCAATTAGAGATTTCCTTTTCCA AGCTGATAAGTTACCATTGATTTTGCAAACCAAAGGGTTCCACATGGACTTCTTCCTCGGTTTTCC
CDS sequence (LotjaGi2g1v0168600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCATGCGCCAGTTCTAGTTCTCAAGGACTCTTTGAAACGTGAGTCTGGAGCAAAGGTGCACCATGCTAATATTCAGGC GTCTAAGGCCGTTGCTGACATAATCCGTACCACATTGGGACCCAGGTCCATGCTGAAAATGCTTCTTGATGCTTCGGGAG GAATCGTAGTGACTAATGATGGGAATGCTATCTTACGTGAATTAGATGTTGCTCATCCGGCTGCAAAGTCTATGATTGAA TTAAGTCGTACTCAAGATGAAGAAGTAGGAGATGGAACAACATCGGTCATCATTCTTGCTGGTGAGATGCTCCATGTTGC TGAAGCATTCATTGACAAAAATTATCATCCCACAGTTATTTGCCGAGCATATAACAAAGCTTTGGAGGATGCTATTGCTG TTATTGACAAAATTGCAATGCCAATTGATGCTCAAGATCGGGCTACAATGCTGGGGCTAGTAAAAAGCTGCATAGGCACC AAATTCACTGGTCAATTTGGGGATTTGATTGCTGATTTAGCTATTGATGCTACTACAACTGTAGGCGTTGATATTGGCCA AGGTTTGAGAGATGTGGATATTAAAAATTATATTAAGGTTGAGAAGGTACCTGGTGGGCAGCTGGAGGATTCAAGAGTTC TTAAGGGAGTTATGTTTAACAAAGATGTAGTTGCCCCTGGCAAAATGAGGAGAAAGATCGTTAACCCACGTATCATTCTC CTTGATTCTCCTCTTGAGTATAAAAAGGGTGAAAACCAAACAAATGCTGAACTGCTTAAAGAAGAAGATTGGAGTGTCTT ATTGAAGATGGAGGAAGAATACATGGAGGAGCTCTGCATGCAGATATTGAAGTTCAAACCGGACTTAGTAATTACAGAGA AGGGCCTTAGTGATTTGGCATGCCATTATTTCAGCAAGCATGGAGTTACTGCAATCAGGAGATTGAGGAAAACTGATAAT AATAGAATTGCCAAGGCATGTGGTGCTGTTATTGTGAACAGACCAGATGAATTGCAGGAGTCTGATGTTGGTACTGGTGC AGGGTTATTTGAAGTTAAGAAAATTGGAGATGAATTCTTTGCATTCATTGTTGATTGCAAAGACCCCAAAGCTTGTACTG TACTATTAAGGGGTGCTAGTAAGGATCTCTTAAACGAGGTTGAAAGAAACCTACAGGATGCTATGTCTGTTGCAAGGAAC ATAATCAAAAATCCAAAGCTTCTTCCTGGAGGTGGTGCTACTGAGTTTACTGTGTCAGCTACTTTGAAACAGAAGAGTTC ATCTATTGAAGGGATAGAGAAGTGGCCGTATGAAGCTGCTGCAATTGCTTTTGAAGCTATTCCACGAACTTTAGCACAAA ATTGTGGAGTAAATGTCATCCGGACTATGACTGCACTACAAGGAAAACATGCAAATGGAGAAAATGCTTGGATTGGCATA GATGGAAATACTGGTGCCATTGCTGACATGAAAGAGCGCAAGATCTGGGATGCCTATAATGTTAAGGCACAAACGTTTAA GACCGCCATTGAAGCTGCTTGCATGCTTTTGAGGATTGATGATATCGTGAGTGGGATCAAGAAGAAACAGGCCCCTGGAG CAGGTCCCTCAAAGCCCAAGGTTGAGACTGAGGCAGATGCTGACGGCGAGCAAATCCTTCCCGACTAA
Protein sequence (LotjaGi2g1v0168600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MHAPVLVLKDSLKRESGAKVHHANIQASKAVADIIRTTLGPRSMLKMLLDASGGIVVTNDGNAILRELDVAHPAAKSMIE LSRTQDEEVGDGTTSVIILAGEMLHVAEAFIDKNYHPTVICRAYNKALEDAIAVIDKIAMPIDAQDRATMLGLVKSCIGT KFTGQFGDLIADLAIDATTTVGVDIGQGLRDVDIKNYIKVEKVPGGQLEDSRVLKGVMFNKDVVAPGKMRRKIVNPRIIL LDSPLEYKKGENQTNAELLKEEDWSVLLKMEEEYMEELCMQILKFKPDLVITEKGLSDLACHYFSKHGVTAIRRLRKTDN NRIAKACGAVIVNRPDELQESDVGTGAGLFEVKKIGDEFFAFIVDCKDPKACTVLLRGASKDLLNEVERNLQDAMSVARN IIKNPKLLPGGGATEFTVSATLKQKSSSIEGIEKWPYEAAAIAFEAIPRTLAQNCGVNVIRTMTALQGKHANGENAWIGI DGNTGAIADMKERKIWDAYNVKAQTFKTAIEAACMLLRIDDIVSGIKKKQAPGAGPSKPKVETEADADGEQILPD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 4 | 541 | 538 | 0.0 | – | |
| PANTHER | 4 | 541 | 538 | 0.0 | – | |
| CDD | 4 | 525 | 522 | 0.0 | ||
| TIGRFAM | 4 | 529 | 526 | 3.8E-279 | ||
| SUPERFAMILY | 13 | 525 | 513 | 9.16E-85 | ||
| Gene3D | 24 | 523 | 500 | 4.2E-180 | ||
| Pfam | 31 | 524 | 494 | 4.3E-161 | ||
| PRINTS | 33 | 49 | 17 | 3.4E-28 | ||
| ProSitePatterns | 36 | 48 | 13 | - | ||
| PRINTS | 55 | 73 | 19 | 3.4E-28 | ||
| ProSitePatterns | 57 | 73 | 17 | - | ||
| PRINTS | 85 | 104 | 20 | 3.4E-28 | ||
| ProSitePatterns | 85 | 93 | 9 | - | ||
| SUPERFAMILY | 142 | 404 | 263 | 2.32E-24 | ||
| Gene3D | 143 | 405 | 263 | 4.2E-180 | ||
| SUPERFAMILY | 210 | 378 | 169 | 1.54E-46 | ||
| Gene3D | 214 | 370 | 157 | 4.2E-180 | ||
| PRINTS | 373 | 395 | 23 | 3.4E-28 | ||
| Coils | 384 | 404 | 21 | - | – | |
| PRINTS | 407 | 419 | 13 | 3.4E-28 | ||
| MobiDBLite | 528 | 555 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | ATP binding | Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator. | ||
| Biological process | Protein folding | The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure. | ||
| Molecular function | Unfolded protein binding | Interacting selectively and non-covalently with an unfolded protein. |
Expression pattern of LotjaGi2g1v0168600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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