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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR027410
Separate each keyword, or gene/transcript ID, with a comma or tab. Spaces are not accepted as delimiters due to their potential use in boolean searches.
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We have found 59 results. Now displaying 1 of 2 with 50 rows per page. This search has taken 5.946s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0243669.1
n.a. cytosolic chaperonin, delta subunit [Glycine max] gi|255957392|emb|CBA13550.1| chr0 126419416 126422022 -
2 domain predictions
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Lj0g3v0306429.1
n.a. PREDICTED: T-complex protein 1 subunit epsilon-like [Glycine max] gi|356567490|ref|XP_003551952.1| chr0 159896420 159901378 -
2 domain predictions
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Lj1g3v3328880.1
n.a. PREDICTED: T-complex protein 1 subunit zeta-like [Glycine max] gi|356569084|ref|XP_003552736.1| chr1 37370472 37377132 +
2 domain predictions
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Lj2g3v0546890.1
n.a. PREDICTED: T-complex protein 1 subunit gamma-like [Cicer arietinum] gi|502162879|ref|XP_004512647.1| chr2 7305410 7310783 -
2 domain predictions
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Lj2g3v2948530.1
n.a. T-complex protein 1 subunit eta [Medicago truncatula] gi|357493557|ref|XP_003617067.1| chr2 38308984 38314488 +
2 domain predictions
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Lj4g3v2644180.1
n.a. PREDICTED: T-complex protein 1 subunit alpha-like [Cicer arietinum] gi|502140465|ref|XP_004504226.1| chr4 35989760 35997154 -
2 domain predictions
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Lj4g3v3114050.1
n.a. cytosolic chaperonin, delta subunit [Glycine max] gi|255957392|emb|CBA13550.1| chr4 41876583 41878891 -
2 domain predictions
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Lj4g3v3114060.1
n.a. PREDICTED: T-complex protein 1 subunit delta-like isoform 1 [Glycine max] gi|356513010|ref|XP_003525207.1| chr4 41877336 41878431 -
2 domain predictions
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Lj6g3v0776070.1
n.a. PREDICTED: T-complex protein 1 subunit beta-like isoform X2 [Cicer arietinum] gi|502104047|ref|XP_004492422.1| chr6 7424333 7432167 +
2 domain predictions
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LotjaGi1g1v0058100.1
n.a. T-complex protein 1 subunit eta; TAIR: AT3G11830.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9SF16|TCPH_ARATH T-complex protein 1 subunit eta; TrEMBL-Plants: tr|G7K2W1|G7K2W1_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi1g1v0058100 LjG1.1_chr1 8124527 8130432 -
3 domain predictions
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LotjaGi1g1v0058100.2
n.a. T-complex protein 1 subunit eta; TAIR: AT3G11830.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9SF16|TCPH_ARATH T-complex protein 1 subunit eta; TrEMBL-Plants: tr|A0A0L9UVX2|A0A0L9UVX2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0058100 LjG1.1_chr1 8125027 8130015 -
3 domain predictions
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LotjaGi1g1v0058100.3
n.a. T-complex protein 1 subunit eta; TAIR: AT3G11830.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9SF16|TCPH_ARATH T-complex protein 1 subunit eta; TrEMBL-Plants: tr|G7K2W1|G7K2W1_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi1g1v0058100 LjG1.1_chr1 8125027 8130132 -
3 domain predictions
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LotjaGi1g1v0058100.4
n.a. T-complex protein 1 subunit eta; TAIR: AT3G11830.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9SF16|TCPH_ARATH T-complex protein 1 subunit eta; TrEMBL-Plants: tr|A0A0L9UVX2|A0A0L9UVX2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0058100 LjG1.1_chr1 8125363 8130132 -
3 domain predictions
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LotjaGi1g1v0058100.5
n.a. T-complex protein 1 subunit eta; TAIR: AT3G11830.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9SF16|TCPH_ARATH T-complex protein 1 subunit eta; TrEMBL-Plants: tr|A0A0L9UVX2|A0A0L9UVX2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0058100 LjG1.1_chr1 8125371 8130015 -
3 domain predictions
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LotjaGi1g1v0219200.1
n.a. T-complex protein 1 subunit theta; TAIR: AT3G03960.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q94K05|TCPQ_ARATH T-complex protein 1 subunit theta; TrEMBL-Plants: tr|V7C3G7|V7C3G7_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0219200 LjG1.1_chr1 48569304 48578676 +
3 domain predictions
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LotjaGi1g1v0250800_LC.1
n.a. T-complex protein 1 subunit zeta; TAIR: AT3G02530.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9M888|TCPZA_ARATH T-complex protein 1 subunit zeta 1; TrEMBL-Plants: tr|A0A072TVM3|A0A072TVM3_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi1g1v0250800_LC LjG1.1_chr1 60199494 60200672 -
2 domain predictions
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LotjaGi1g1v0438900.1
n.a. T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|A0A1J7HDU4|A0A1J7HDU4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438900 LjG1.1_chr1 93415685 93427458 -
3 domain predictions
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LotjaGi1g1v0438900.2
n.a. T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|A0A1J7HDU4|A0A1J7HDU4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438900 LjG1.1_chr1 93416237 93427445 -
3 domain predictions
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LotjaGi1g1v0438900.3
n.a. T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|I1LRE4|I1LRE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438900 LjG1.1_chr1 93416614 93426805 -
3 domain predictions
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LotjaGi1g1v0438900.4
n.a. T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|I1LRE4|I1LRE4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438900 LjG1.1_chr1 93416614 93426969 -
3 domain predictions
 –
LotjaGi1g1v0438900.5
n.a. T-complex protein 1 subunit beta; TAIR: AT5G20890.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q940P8|TCPB_ARATH T-complex protein 1 subunit beta; TrEMBL-Plants: tr|A0A1J7HDU4|A0A1J7HDU4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0438900 LjG1.1_chr1 93416614 93427058 -
3 domain predictions
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LotjaGi1g1v0551600.1
n.a. T-complex protein 1 subunit zeta; TAIR: AT3G02530.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9M888|TCPZA_ARATH T-complex protein 1 subunit zeta 1; TrEMBL-Plants: tr|A0A151TDH0|A0A151TDH0_CAJCA T-complex protein 1 subunit zeta; Found in the gene: LotjaGi1g1v0551600 LjG1.1_chr1 108288795 108295014 +
2 domain predictions
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LotjaGi1g1v0551600.2
n.a. T-complex protein 1 subunit zeta; TAIR: AT3G02530.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9M888|TCPZA_ARATH T-complex protein 1 subunit zeta 1; TrEMBL-Plants: tr|A0A072TVM3|A0A072TVM3_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi1g1v0551600 LjG1.1_chr1 108288795 108295014 +
2 domain predictions
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LotjaGi1g1v0551600.3
n.a. T-complex protein 1 subunit zeta; TAIR: AT3G02530.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9M888|TCPZA_ARATH T-complex protein 1 subunit zeta 1; TrEMBL-Plants: tr|A0A072TVM3|A0A072TVM3_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi1g1v0551600 LjG1.1_chr1 108288795 108295014 +
2 domain predictions
 –
LotjaGi2g1v0168600.1
n.a. T-complex protein 1 subunit gamma; TAIR: AT5G26360.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q84WV1|TCPG_ARATH T-complex protein 1 subunit gamma; TrEMBL-Plants: tr|A0A1J7HGR3|A0A1J7HGR3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0168600 LjG1.1_chr2 58077584 58083969 -
3 domain predictions
 –
LotjaGi2g1v0168600.2
n.a. T-complex protein 1 subunit gamma; TAIR: AT5G26360.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q84WV1|TCPG_ARATH T-complex protein 1 subunit gamma; TrEMBL-Plants: tr|G7IPS8|G7IPS8_MEDTR T-complex protein 1 subunit gamma; Found in the gene: LotjaGi2g1v0168600 LjG1.1_chr2 58078867 58083209 -
3 domain predictions
 –
LotjaGi2g1v0168600.3
n.a. T-complex protein 1 subunit gamma; TAIR: AT5G26360.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q84WV1|TCPG_ARATH T-complex protein 1 subunit gamma; TrEMBL-Plants: tr|G7IPS8|G7IPS8_MEDTR T-complex protein 1 subunit gamma; Found in the gene: LotjaGi2g1v0168600 LjG1.1_chr2 58078867 58083209 -
3 domain predictions
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LotjaGi2g1v0287400.1
n.a. 60 kDa chaperonin; TAIR: AT1G26230.2 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9C667|CPNB4_ARATH Chaperonin 60 subunit beta 4, chloroplastic; TrEMBL-Plants: tr|A0A151R5F8|A0A151R5F8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0287400 LjG1.1_chr2 76043635 76047781 -
2 domain predictions
 –
LotjaGi2g1v0287400.2
n.a. 60 kDa chaperonin; TAIR: AT1G26230.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9C667|CPNB4_ARATH Chaperonin 60 subunit beta 4, chloroplastic; TrEMBL-Plants: tr|A0A151R5F8|A0A151R5F8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0287400 LjG1.1_chr2 76043657 76047702 -
3 domain predictions
 –
LotjaGi2g1v0287400.3
n.a. 60 kDa chaperonin; TAIR: AT1G26230.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9C667|CPNB4_ARATH Chaperonin 60 subunit beta 4, chloroplastic; TrEMBL-Plants: tr|A0A151R5F8|A0A151R5F8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0287400 LjG1.1_chr2 76043666 76047322 -
3 domain predictions
 –
LotjaGi2g1v0287400.4
n.a. 60 kDa chaperonin; TAIR: AT1G26230.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9C667|CPNB4_ARATH Chaperonin 60 subunit beta 4, chloroplastic; TrEMBL-Plants: tr|A0A151R5F8|A0A151R5F8_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0287400 LjG1.1_chr2 76044479 76047702 -
2 domain predictions
 –
LotjaGi3g1v0145800.1
n.a. 60 kDa chaperonin; TAIR: AT1G55490.1 chaperonin 60 beta; Swiss-Prot: sp|P08927|RUBB_PEA RuBisCO large subunit-binding protein subunit beta, chloroplastic; TrEMBL-Plants: tr|A0A1J7FWW4|A0A1J7FWW4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0145800 LjG1.1_chr3 19402055 19407679 +
3 domain predictions
 –
LotjaGi3g1v0145800.2
n.a. 60 kDa chaperonin; TAIR: AT1G55490.1 chaperonin 60 beta; Swiss-Prot: sp|P08927|RUBB_PEA RuBisCO large subunit-binding protein subunit beta, chloroplastic; TrEMBL-Plants: tr|A0A1J7FWW4|A0A1J7FWW4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0145800 LjG1.1_chr3 19402608 19406847 +
3 domain predictions
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LotjaGi3g1v0425000.1
n.a. Chaperonin-60 kDa protein; TAIR: AT3G13860.1 heat shock protein 60-3A; Swiss-Prot: sp|Q93ZM7|CH60C_ARATH Chaperonin CPN60-like 2, mitochondrial; TrEMBL-Plants: tr|A0A1J7HWB3|A0A1J7HWB3_LUPAN Uncharacterized protein; Found in the gene: LotjaGi3g1v0425000 LjG1.1_chr3 83429299 83436406 -
3 domain predictions
 –
LotjaGi3g1v0488200.1
n.a. 60 kDa chaperonin; TAIR: AT2G28000.1 chaperonin-60alpha; Swiss-Prot: sp|P08926|RUBA_PEA RuBisCO large subunit-binding protein subunit alpha, chloroplastic; TrEMBL-Plants: tr|I3SYP8|I3SYP8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0488200 LjG1.1_chr3 90588487 90592086 -
3 domain predictions
 –
LotjaGi4g1v0068500.1
n.a. T-complex protein 1 subunit delta; TAIR: AT3G18190.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9LV21|TCPD_ARATH T-complex protein 1 subunit delta; TrEMBL-Plants: tr|C7C6E1|C7C6E1_SOYBN T-complex protein 1 subunit delta; Found in the gene: LotjaGi4g1v0068500 LjG1.1_chr4 8629730 8632390 +
2 domain predictions
 –
LotjaGi4g1v0068500.3
n.a. T-complex protein 1 subunit delta; TAIR: AT3G18190.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9LV21|TCPD_ARATH T-complex protein 1 subunit delta; TrEMBL-Plants: tr|C7C6E1|C7C6E1_SOYBN T-complex protein 1 subunit delta; Found in the gene: LotjaGi4g1v0068500 LjG1.1_chr4 8630155 8631856 +
2 domain predictions
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LotjaGi4g1v0068500.4
n.a. T-complex protein 1 subunit delta; TAIR: AT3G18190.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9LV21|TCPD_ARATH T-complex protein 1 subunit delta; TrEMBL-Plants: tr|I1K5G1|I1K5G1_SOYBN T-complex protein 1 subunit delta; Found in the gene: LotjaGi4g1v0068500 LjG1.1_chr4 8630734 8631824 +
2 domain predictions
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LotjaGi4g1v0083300.1
n.a. 60 kDa chaperonin; TAIR: AT5G18820.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q56XV8|CPNA2_ARATH Chaperonin 60 subunit alpha 2, chloroplastic; TrEMBL-Plants: tr|I1KM81|I1KM81_SOYBN Uncharacterized protein; Found in the gene: LotjaGi4g1v0083300 LjG1.1_chr4 10906727 10913311 -
3 domain predictions
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LotjaGi4g1v0083300.2
n.a. 60 kDa chaperonin; TAIR: AT5G18820.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q56XV8|CPNA2_ARATH Chaperonin 60 subunit alpha 2, chloroplastic; TrEMBL-Plants: tr|G7JJX9|G7JJX9_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi4g1v0083300 LjG1.1_chr4 10906727 10913311 -
3 domain predictions
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LotjaGi4g1v0083300.3
n.a. 60 kDa chaperonin; TAIR: AT5G18820.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q56XV8|CPNA2_ARATH Chaperonin 60 subunit alpha 2, chloroplastic; TrEMBL-Plants: tr|G7JJX9|G7JJX9_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi4g1v0083300 LjG1.1_chr4 10907434 10911607 -
3 domain predictions
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LotjaGi4g1v0083300.4
n.a. 60 kDa chaperonin; TAIR: AT5G18820.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q56XV8|CPNA2_ARATH Chaperonin 60 subunit alpha 2, chloroplastic; TrEMBL-Plants: tr|G7JJX9|G7JJX9_MEDTR TCP-1/cpn60 chaperonin family protein; Found in the gene: LotjaGi4g1v0083300 LjG1.1_chr4 10907434 10912836 -
3 domain predictions
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LotjaGi4g1v0384900.1
n.a. T-complex protein 1 subunit alpha; TAIR: AT3G20050.1 T-complex protein 1 alpha subunit; Swiss-Prot: sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha; TrEMBL-Plants: tr|A0A0L9TJL4|A0A0L9TJL4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0384900 LjG1.1_chr4 76329041 76337004 -
3 domain predictions
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LotjaGi4g1v0384900.2
n.a. T-complex protein 1 subunit alpha; TAIR: AT3G20050.1 T-complex protein 1 alpha subunit; Swiss-Prot: sp|P28769|TCPA_ARATH T-complex protein 1 subunit alpha; TrEMBL-Plants: tr|A0A0L9TJL4|A0A0L9TJL4_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0384900 LjG1.1_chr4 76329858 76336851 -
3 domain predictions
 –
LotjaGi4g1v0461000.1
n.a. T-complex protein 1 subunit delta; TAIR: AT3G18190.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9LV21|TCPD_ARATH T-complex protein 1 subunit delta; TrEMBL-Plants: tr|C7C6E1|C7C6E1_SOYBN T-complex protein 1 subunit delta; Found in the gene: LotjaGi4g1v0461000 LjG1.1_chr4 83160610 83163334 -
2 domain predictions
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LotjaGi4g1v0461000.2
n.a. T-complex protein 1 subunit delta; TAIR: AT3G18190.1 TCP-1/cpn60 chaperonin family protein; Swiss-Prot: sp|Q9LV21|TCPD_ARATH T-complex protein 1 subunit delta; TrEMBL-Plants: tr|C7C6E1|C7C6E1_SOYBN T-complex protein 1 subunit delta; Found in the gene: LotjaGi4g1v0461000 LjG1.1_chr4 83161508 83163215 -
2 domain predictions
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LotjaGi5g1v0258100.1
n.a. 60 kDa chaperonin; TAIR: AT3G23990.1 heat shock protein 60; Swiss-Prot: sp|Q05046|CH62_CUCMA Chaperonin CPN60-2, mitochondrial; TrEMBL-Plants: tr|A0A0B2NVB9|A0A0B2NVB9_GLYSO Chaperonin CPN60-2, mitochondrial; Found in the gene: LotjaGi5g1v0258100 LjG1.1_chr5 56658763 56663732 +
3 domain predictions
 –
LotjaGi5g1v0258100.2
n.a. 60 kDa chaperonin; TAIR: AT3G23990.1 heat shock protein 60; Swiss-Prot: sp|Q05046|CH62_CUCMA Chaperonin CPN60-2, mitochondrial; TrEMBL-Plants: tr|Q1RSH3|Q1RSH3_MEDTR GroEL-like chaperone, ATPase; Found in the gene: LotjaGi5g1v0258100 LjG1.1_chr5 56659298 56663201 +
3 domain predictions
 –
LotjaGi5g1v0258100.3
n.a. 60 kDa chaperonin; TAIR: AT3G23990.1 heat shock protein 60; Swiss-Prot: sp|Q05046|CH62_CUCMA Chaperonin CPN60-2, mitochondrial; TrEMBL-Plants: tr|Q1RSH3|Q1RSH3_MEDTR GroEL-like chaperone, ATPase; Found in the gene: LotjaGi5g1v0258100 LjG1.1_chr5 56659298 56663201 +
3 domain predictions
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LotjaGi5g1v0258100.4
n.a. 60 kDa chaperonin; TAIR: AT3G23990.1 heat shock protein 60; Swiss-Prot: sp|Q05046|CH62_CUCMA Chaperonin CPN60-2, mitochondrial; TrEMBL-Plants: tr|Q1RSH3|Q1RSH3_MEDTR GroEL-like chaperone, ATPase; Found in the gene: LotjaGi5g1v0258100 LjG1.1_chr5 56659526 56663185 +
3 domain predictions
 –