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LotjaGi2g1v0183100.3

Overview

Field Value
Gene ID LotjaGi2g1v0183100
Transcript ID LotjaGi2g1v0183100.3
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Protein argonaute; TAIR: AT1G48410.1 Stabilizer of iron transporter SufD / Polynucleotidyl transferase; Swiss-Prot: sp|O04379|AGO1_ARATH Protein argonaute 1; TrEMBL-Plants: tr|I1MQL3|I1MQL3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0183100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:60616893..60622467) extracted from Lotus japonicus Gifu genome v1.2.

ATGGTTAGGAAGAGGAGAACTGATGGACCTAGTGGGGGTGAAGGTTCTGAGGGCCAACACTCTCATTCTACTGAGAGGAG TGCTCCGCCTCCTCAACAGGCTGCTGCTGCACCGGGAGGAGGAGGACCGGGACCCCAAGGGGGTAGAGGTTATGGTGGTC CACCACAAGGTGGACGTGGCGGCGGCTATGGTGGTGGTGGTGGGCCGGGTTATGGTGGTGGGGGGCGCGGTGGCCATGGG GTGCCACAACAGCAGTATGGCGGCCCTCCTGAGTATCAAGGTAGGGGGAGGGGAGGCCCTTCTCAGCAAGGAGGGCGCGG TGGATATAGTGGTGGCGGCGGAGGATATGGTGGTGGCGGAGGCCGGGGAGGTGGTGGTATGGGCAGTGGCCGTGGCGTAA GTCCCTCACATGGTGGCCCACCATCTAGGCCACCAGCTCCCGAGCTGCACCAAGCAACCCCAGTTCCATATCAAGCTGGG GTGACTCCTCAGCCTCCACCATATGAGGCGAGTTCATCATCATCTCAGCCTGACGTGTCTGAAGTTGAGAAGCAGATGTC CCAGATGGTAGTGGAAACTGAAACTGTGCCTACTCCTCCTCCTGCAAGTAAATCATCTATGAGATTTCCCCTCCGCCCTG GAAAGGGTAGCTATGGCACCAAGTGTATTGTTAAGGCCAATCATTTCTTTGCGGAGCTGCCTAATAAAGATCTGCATCAG TATGATGTAAGTTCTACCTTTAATGATTGGTAATATTTGTTAATCCTTTTGTGGGTAACATGGTGCTTATATTGTTGCTG CTCTTGGTTGCTTAGGTAACTATTACTCCAGAAGTTACTTCTAGAGGTGTGAACCGTGCTGTCATGGAGCAGCTGGTGAG GCTGTACCGAGAGTCTCACCTTGGAAAGAGACTTCCTGCCTATGATGGCCGGAAAAGTCTTTATACTGCAGGTGCACTGC CATTCATTTCAAAGGAGTTCAGAATCACCCTAGTTGATGATGATGAGGGAGCTGGAGCAGCACCAAGGTTTGCTTAATGT CTATTTCCAAATGTTTCTACATGGCTTCTTACGTGTTTAATTGTTTAATTGTTTATCTTTTGATTTATTTTGAAACAGGA GGGATAGGGAGTTCAAAGTTGTGATAAAATTGGCTGCACGAGCGGATCTTCACCACCTGGGCCTGTTTTTACAGGGGAGG CAAACAGATGCTCCTCAGGAAGCTCTACAGGTTCTAGACATTGTTCTGCGTGAACTCCCCACTACCAGGTTCTTGATGTA GTTTTTAATTGTTTGTTGACTTCCTGTGTTGAACTCATCGTTCACCATGCCTGGTTTTGACACTTATGATGCTACAGGTA TTGTCCAGTGGGGAGGTCATTCTATTCACCTGATCTTGGTAGAAGGCAGCCCTTAGGTGAGGGATTGGAAAGTTGGCGTG GTTTCTATCAGAGCATTCGTCCCACACAAATGGGACTGTCCCTGAACATTGGTATGTAAATCTCATTTGTTTAGTTGGCA TTTCTTTTATTTAGCTCTAGATTCTTTGTTTCTTCATTTTCCTTGAGAAATTACTAACCAAATGTTCATGTATAGACATG TCATCAACGGCATTTATTGAGCCTTTGCCAGTCATAGAATTTGTGAATCAATTGCTGAGCAGGGATGTCTCCTCCCGTCC ATTGTCTGATGCTGACCGCGTCAAGGTCAGATTGTTAACAGCCCTTTCTGTATATCTTCATCTTTTATCCTGCAAAATTT GTCAGTACTATTTTCAATGTTAAAATCTTTACAATCTCAGTGGTCTGATAACTAAATCAGAAATGCAATAATGATATGCC ATTGTATGCTTGAAAGTCTTGTTTTTTGATGTCATTGATAATTGATGTCATTAGTTGAAATCTTTGAATGGTTTTGGTTC ACAGCGTGGCTTTTTAAGAAATGATGAGAATGGGATTGTCCTGAAACCCACAAACTAACTTCCTTTCTTAATGTGTGACA GATAAAAAAAGCACTCCGTGGTATCAAAGTTGAAGTAACACATCGTGGTAACATGAGACGGAAGTATCGTATCTCTGGTC TGACCTCACAGGCTACTAGAGAGCTGACGTGAGTAATAAGAACAGTTTTTGTTTCTAATGCTAATTATGAATTCTTTTCC TGACTTTATTTTATCAATAATTTTAGGTTCCCTGTGGACGAGAGGGGTACAATGAAGTCTGTTGTTGAATATTTCATGGA GACCTATGGTTTTGTTATTCGACACACTCAGTGGCCTTGTTTGCAAGTGGGCAATACACAGAGACCAAACTATTTACCAA TGGAGGTAGAAAAATTGAACCAATTATTAGCTGTTGGATATTACGTGGACAAGTCTGTGAGTAATTGCTTGTTTGTAATG TAGGTTTGCAAGATAGTAGAAGGCCAACGGTACTCAAAACGCCTCAATGAGAGACAAATTACTGCTTTGCTTAAAGTCAC ATGCCAGCGTCCTGTTGAGAGGGAGCGCGATATCATGCAGGTTCGAAGAATATTGTCTTAGCATTCATGTTATATATATA TATATATATATGTTTTTTTTATTGGTCATGAATAGTTTAATAATTTTTACCTTAGGACCTGGTGTTTTTTGTAATTATAT ATGTAGATTCTTAATTTGCTGATTTATTCTGTGTACTTCTGTAGCTCTTTTCATATTTTGTCAGTTTCTTGTTTGGATTT AAAGGTTTATGGTTTGATCTATTAGTTGCTTTATTCCCTACTTAATGCTTCATGCCTTTGTGCTGTACAGACTGTTCATC ACAATGCCTATCATGAGGATCCTTATGCTAAGGAGTTTGGAATCAAAATCAGTGAGAAGCTTGCTCAAGTTGAAGCTCGC ATTCTTCCTCCACCTTGGGTATTTTTTTTTGTCTCATCAATATTTTTAATTTTATTTGTTTCATTGTCTTGATTTTATTT TATGGCAATTGACATTATCTTCCTCCCCTTCAGCTCAAATACCATGATACTGGTAGAGAAAAGGATTGTCTTCCTCAAGT TGGGCAATGGAATATGATGAACAAGGTATTTTCTCTAGGCGCACTGCACTTGAACTTACTGTGGAACATGTTTAAGATTC TCTTCTCTTGAGAGGTTCTTGAGGCTTTAGAATTGAGTAAATATGTTAAGGTTAATTTTGTTTTTCTCTTGCTATATAAG TTTGAAACATCTTTTTGCTGTCTCATTATTTCAGAAAATGGTCAATGGAGGGACAGTCAACAACTGGTTCTGCATAAACT TCTCAAGGAATGTGCAGGATAGTGTTGCCCGTGGCTTTTGCTATGAACTTGCCCAAATGTGTTATATATCTGGCATGGTG TGAATAAATTCTTCTTGCTAATTTTATTTCTCTAATAGATAGTTTACTTCATTACATGATTGTTCTGGTACTTGTATTCA GGCATTCAATCCTGAGCCAGTGGTCCCCCCACTAAGTGCTAGGCCTGATCAAGTGGAGAAAGTTCTTAAAACGCGCTATC ACGATGCTAAAAATAAGTTGCAAGGGAGAGAACTGGATCTGCTAATTGTTATTCTGCCGGATAACAATGGCTCTCTGTAT GGTATGCTGTTGAACTGATCTCTGCTCACCTTCCTTTCTAGTGTTATTTTGATTGATATAATAGTGGATCTCTTCATTGT ATGATTTGGTATGCAGGGGACTTGAAAAGGATTTGTGAGACTGACCTTGGGCTTGTCTCCCAGTGCTGCTTAACAAAACA TGTTTTCAAAATGAGTAAGCAGTACTTAGCTAATGTAGCTTTGAAGATTAATGTAAAGGTTGGGGGCAGGAACACGGTTC TTGTTGATGCTCTTTCACGGCGCATTCCTTTAGTCAGTGACAGGCCTACAATTATTTTTGGGGCAGATGTCACTCATCCA CATCCTGGGGAGGATTCTAGTCCATCAATAGCAGCTGTACGTTCTTTATTTGTGTGTTTAGGCCAAGCAGTGAAAGCTTG AAAATACTTAATATTTGCCTCTTTTTTAAATCATGCTTGTTGATACTGTAGGTTGTGGCTTCTCAAGATTATCCTGAAAT CACCAAGTATGCTGGTTTGGTTTGTGCCCAAGCACATCGGCAGGAGCTCATTCAAGATCTTTTCAAACAATGGCAAGATC CAGTCAGAGGAACATTAACTGGTGGAATGATCAAGTACTCTCTGTCTTTCTCTTTCTTCATATGTTTGTTCATTAATGCA CATGCGGCATCTGATAATTCCTTGTGGTTCAGTTTTTCTAGTTTTCTTATTATATTATTTGTTTGTAGGGAACTTCTTAT ATCTTTCCGGAGGGCTACAGGACAAAAGCCGCAGCGCATCATATTTTACAGGTAGTCTTATGTTCAAGTCCTTTATGATC ATTGTGATCTTTTTATGTTGGTATATCCGTATATGATATTCTAAATTATTATTTTCAGGGATGGTGTAAGTGAAGGGCAG TTTTATCAAGTTTTATTGTTTGAGCTTGATGCTATCCGAAAGGTGAAGAATATTTTTCTTGTTTGGTCAACAACTTTGAA CAATCTTTGTTGTTATTGCTAACAATCTGTTCACCACTTCCAGGCTTGTGCATCTCTGGAGCCCAACTACCAGCCTCCTG TAACTTTTGTTGTGGTTCAGAAGCGGCACCACACGAGGCTGTTTGCCAGTAACCATCATGACAAGAGTTCTGTTGACCGG AGTGGCAATATTTTGCCTGGTATTTACTCTAATTTGATACATGGCAATTCTTGTATAATAATCTTGTTTCTCATTTCTGA TGCCAAAGAACACTACCTGTAAATGTTGCAGGCACTGTGGTGGACTCCAAGATCTGCCATCCAACGGAGTTCGATTTTTA TCTTTGTTCCCATGCTGGAATCCAGGTGATTTTTTGCCTCTTTCGTCTCTTTTAAATTGAAAGTGGATTATATTCTTATG GGAATCATGTTGGCAGGGCACAAGCCGTCCTGCGCATTACCACGTCCTGTGGGACGAGAACAACTTCACTGCTGATGGTT TACAAAGCCTTACCAACAACCTGTGCTACACGTAAGTATTAAACTAGTAATGTGATATTGGAATCTTCCCAAATTTCAAG ATATTTAATTTTTTTTTAAAAATATTTACTGCAGCTATGCAAGGTGCACACGATCTGTATCTATTGGTGAGCTTTCTTTC GAACTCTAATATTTAGTTTTGTTACACATTCAATCATTGATTTTCTACTCAATAGTTATGAAGTCTTCACTTTTATCTCC TGAAGAGTGAACACTTTACTTGAGAAGAACCAAATTTAATTATAGGTTGTTTTTGGTACCTGATTCTGTTTTATGTATGA CAATTGCAGTGCCTCCAGCATACTATGCCCATCTCGCAGCCTTCCGAGCAAGGTTCTATATGGAGCCTGAAACTTCTGAC AGTGGCTCCATGACCAGTGCTGCTGCTGGTCGCGGAATGGGTGGACGAACTACTCGGGCACCTGGTGCCAACGCTGCAGT GAGGCCATTACCTGCACTTAAGGAGAACGTCAAGAGGGTGATGTTCTACTGTTAG 

CDS sequence (LotjaGi2g1v0183100.3) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTTAGGAAGAGGAGAACTGATGGACCTAGTGGGGGTGAAGGTTCTGAGGGCCAACACTCTCATTCTACTGAGAGGAG TGCTCCGCCTCCTCAACAGGCTGCTGCTGCACCGGGAGGAGGAGGACCGGGACCCCAAGGGGGTAGAGGTTATGGTGGTC CACCACAAGGTGGACGTGGCGGCGGCTATGGTGGTGGTGGTGGGCCGGGTTATGGTGGTGGGGGGCGCGGTGGCCCTTCT CAGCAAGGAGGGCGCGGTGGATATAGTGGTGGCGGCGGAGGATATGGTGGTGGCGGAGGCCGGGGAGGTGGTGGTATGGG CAGTGGCCGTGGCGTAAGTCCCTCACATGGTGGCCCACCATCTAGGCCACCAGCTCCCGAGCTGCACCAAGCAACCCCAG TTCCATATCAAGCTGGGGTGACTCCTCAGCCTCCACCATATGAGGCGAGTTCATCATCATCTCAGCCTGACGTGTCTGAA GTTGAGAAGCAGATGTCCCAGATGGTAGTGGAAACTGAAACTGTGCCTACTCCTCCTCCTGCAAGTAAATCATCTATGAG ATTTCCCCTCCGCCCTGGAAAGGGTAGCTATGGCACCAAGTGTATTGTTAAGGCCAATCATTTCTTTGCGGAGCTGCCTA ATAAAGATCTGCATCAGTATGATGTAACTATTACTCCAGAAGTTACTTCTAGAGGTGTGAACCGTGCTGTCATGGAGCAG CTGGTGAGGCTGTACCGAGAGTCTCACCTTGGAAAGAGACTTCCTGCCTATGATGGCCGGAAAAGTCTTTATACTGCAGG TGCACTGCCATTCATTTCAAAGGAGTTCAGAATCACCCTAGTTGATGATGATGAGGGAGCTGGAGCAGCACCAAGGAGGG ATAGGGAGTTCAAAGTTGTGATAAAATTGGCTGCACGAGCGGATCTTCACCACCTGGGCCTGTTTTTACAGGGGAGGCAA ACAGATGCTCCTCAGGAAGCTCTACAGGTTCTAGACATTGTTCTGCGTGAACTCCCCACTACCAGGTATTGTCCAGTGGG GAGGTCATTCTATTCACCTGATCTTGGTAGAAGGCAGCCCTTAGGTGAGGGATTGGAAAGTTGGCGTGGTTTCTATCAGA GCATTCGTCCCACACAAATGGGACTGTCCCTGAACATTGACATGTCATCAACGGCATTTATTGAGCCTTTGCCAGTCATA GAATTTGTGAATCAATTGCTGAGCAGGGATGTCTCCTCCCGTCCATTGTCTGATGCTGACCGCGTCAAGATAAAAAAAGC ACTCCGTGGTATCAAAGTTGAAGTAACACATCGTGGTAACATGAGACGGAAGTATCGTATCTCTGGTCTGACCTCACAGG CTACTAGAGAGCTGACGTTCCCTGTGGACGAGAGGGGTACAATGAAGTCTGTTGTTGAATATTTCATGGAGACCTATGGT TTTGTTATTCGACACACTCAGTGGCCTTGTTTGCAAGTGGGCAATACACAGAGACCAAACTATTTACCAATGGAGGTTTG CAAGATAGTAGAAGGCCAACGGTACTCAAAACGCCTCAATGAGAGACAAATTACTGCTTTGCTTAAAGTCACATGCCAGC GTCCTGTTGAGAGGGAGCGCGATATCATGCAGACTGTTCATCACAATGCCTATCATGAGGATCCTTATGCTAAGGAGTTT GGAATCAAAATCAGTGAGAAGCTTGCTCAAGTTGAAGCTCGCATTCTTCCTCCACCTTGGCTCAAATACCATGATACTGG TAGAGAAAAGGATTGTCTTCCTCAAGTTGGGCAATGGAATATGATGAACAAGAAAATGGTCAATGGAGGGACAGTCAACA ACTGGTTCTGCATAAACTTCTCAAGGAATGTGCAGGATAGTGTTGCCCGTGGCTTTTGCTATGAACTTGCCCAAATGTGT TATATATCTGGCATGGCATTCAATCCTGAGCCAGTGGTCCCCCCACTAAGTGCTAGGCCTGATCAAGTGGAGAAAGTTCT TAAAACGCGCTATCACGATGCTAAAAATAAGTTGCAAGGGAGAGAACTGGATCTGCTAATTGTTATTCTGCCGGATAACA ATGGCTCTCTGTATGGGGACTTGAAAAGGATTTGTGAGACTGACCTTGGGCTTGTCTCCCAGTGCTGCTTAACAAAACAT GTTTTCAAAATGAGTAAGCAGTACTTAGCTAATGTAGCTTTGAAGATTAATGTAAAGGTTGGGGGCAGGAACACGGTTCT TGTTGATGCTCTTTCACGGCGCATTCCTTTAGTCAGTGACAGGCCTACAATTATTTTTGGGGCAGATGTCACTCATCCAC ATCCTGGGGAGGATTCTAGTCCATCAATAGCAGCTGTTGTGGCTTCTCAAGATTATCCTGAAATCACCAAGTATGCTGGT TTGGTTTGTGCCCAAGCACATCGGCAGGAGCTCATTCAAGATCTTTTCAAACAATGGCAAGATCCAGTCAGAGGAACATT AACTGGTGGAATGATCAAGGAACTTCTTATATCTTTCCGGAGGGCTACAGGACAAAAGCCGCAGCGCATCATATTTTACA GGGATGGTGTAAGTGAAGGGCAGTTTTATCAAGTTTTATTGTTTGAGCTTGATGCTATCCGAAAGGCTTGTGCATCTCTG GAGCCCAACTACCAGCCTCCTGTAACTTTTGTTGTGGTTCAGAAGCGGCACCACACGAGGCTGTTTGCCAGTAACCATCA TGACAAGAGTTCTGTTGACCGGAGTGGCAATATTTTGCCTGGCACTGTGGTGGACTCCAAGATCTGCCATCCAACGGAGT TCGATTTTTATCTTTGTTCCCATGCTGGAATCCAGGGCACAAGCCGTCCTGCGCATTACCACGTCCTGTGGGACGAGAAC AACTTCACTGCTGATGGTTTACAAAGCCTTACCAACAACCTGTGCTACACCTATGCAAGGTGCACACGATCTGTATCTAT TGTGCCTCCAGCATACTATGCCCATCTCGCAGCCTTCCGAGCAAGGTTCTATATGGAGCCTGAAACTTCTGACAGTGGCT CCATGACCAGTGCTGCTGCTGGTCGCGGAATGGGTGGACGAACTACTCGGGCACCTGGTGCCAACGCTGCAGTGAGGCCA TTACCTGCACTTAAGGAGAACGTCAAGAGGGTGATGTTCTACTGTTAG 

Protein sequence (LotjaGi2g1v0183100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVRKRRTDGPSGGEGSEGQHSHSTERSAPPPQQAAAAPGGGGPGPQGGRGYGGPPQGGRGGGYGGGGGPGYGGGGRGGPS QQGGRGGYSGGGGGYGGGGGRGGGGMGSGRGVSPSHGGPPSRPPAPELHQATPVPYQAGVTPQPPPYEASSSSSQPDVSE VEKQMSQMVVETETVPTPPPASKSSMRFPLRPGKGSYGTKCIVKANHFFAELPNKDLHQYDVTITPEVTSRGVNRAVMEQ LVRLYRESHLGKRLPAYDGRKSLYTAGALPFISKEFRITLVDDDEGAGAAPRRDREFKVVIKLAARADLHHLGLFLQGRQ TDAPQEALQVLDIVLRELPTTRYCPVGRSFYSPDLGRRQPLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVI EFVNQLLSRDVSSRPLSDADRVKIKKALRGIKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFMETYG FVIRHTQWPCLQVGNTQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPVERERDIMQTVHHNAYHEDPYAKEF GIKISEKLAQVEARILPPPWLKYHDTGREKDCLPQVGQWNMMNKKMVNGGTVNNWFCINFSRNVQDSVARGFCYELAQMC YISGMAFNPEPVVPPLSARPDQVEKVLKTRYHDAKNKLQGRELDLLIVILPDNNGSLYGDLKRICETDLGLVSQCCLTKH VFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDYPEITKYAG LVCAQAHRQELIQDLFKQWQDPVRGTLTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLFELDAIRKACASL EPNYQPPVTFVVVQKRHHTRLFASNHHDKSSVDRSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDEN NFTADGLQSLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSMTSAAAGRGMGGRTTRAPGANAAVRP LPALKENVKRVMFYC 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite 1 190 190 -
MobiDBLite 14 30 17 -
Pfam 78 174 97 1.2E-11
PANTHER 121 1055 935 0.0
PANTHER 121 1055 935 0.0
MobiDBLite 144 181 38 -
Pfam 200 335 136 4.4E-33
SUPERFAMILY 202 548 347 2.04E-55
SMART 344 396 53 2.2E-27
Pfam 345 394 50 1.9E-22
Gene3D 390 515 126 2.2E-38
CDD 396 510 115 2.70814E-43
ProSiteProfiles 397 511 115 34.195
SMART 401 533 133 8.9E-6
Pfam 402 526 125 2.8E-27
Pfam 537 583 47 4.4E-16
CDD 555 1005 451 0.0
Pfam 594 669 76 3.0E-8
Gene3D 602 753 152 3.6E-63
SUPERFAMILY 671 1006 336 3.54E-89
SMART 685 1006 322 1.2E-128
ProSiteProfiles 685 1006 322 59.098
Pfam 686 1005 320 1.1E-114
Gene3D 755 1055 301 1.2E-117
MobiDBLite 1008 1032 25 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Molecular function Nucleic acid binding Interacting selectively and non-covalently with any nucleic acid.
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0183100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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