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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0196200 |
| Transcript ID | LotjaGi2g1v0196200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Down syndrome critical region protein 3 like; TAIR: AT1G48550.1 Vacuolar protein sorting-associated protein 26; Swiss-Prot: sp|O14972|DSCR3_HUMAN Down syndrome critical region protein 3; TrEMBL-Plants: tr|A0A151TEM0|A0A151TEM0_CAJCA Down syndrome critical region protein 3 isogeny; Found in the gene: LotjaGi2g1v0196200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:63051371..63061000) extracted from Lotus japonicus Gifu genome v1.2.
TACAAAATGGCATATTACTCCTTAACTAAAGTTTTATTTTTAATCCCTTTTTTTGTTTCCAAAGTTGAAGACAACAGAAA TGGAAGAATAAGACATTGCAACTTGAAAACTCAGGTAGTTACTTATCGGTGGTTGCTGCCATGTCTGTTGAGCTCAAACT CTCTCGCTCCAATCGTATCTATCGCCCTTCGGTAAAACCCTAATCTCTCTCTCTCTCTCTTTGTGCATACTGGAGTGACA CCCCTCAAACCATTCTCTGGTGCTTTGAATTTCCAGGAAGCTCTGGAAGGCAAAATCATCATCAAAACTCAGTCTTCAAT TTCCCACTATGGAATTCGCCTCACTCTCAAAGGTTCCGTCAACTTGCAGGTGCTTAAAATCATGTAAAGACGTCTACTTT ATGCTAAAAATGATACCTTTTTGCAAAAATCTGTTCGACCCAGTTTAATTTGAACCAAAGGGTATTCAGATTGAGTTTAA TCATGTTAGGTTTTGTGAGTTTGGATTTTGATTTTTTTTTTTTTTGCTGATTTTGCTGCCTTTTTTTGTTTTGTTTATGG AAGGTTCGTGGAGGATCAGCTGGAGTTGTTGAGTCATTCTATGGTGTTATTAAGCCCATCCCAATTGTGTAAGTGAACAA ATTAACTTCTCAAAATGATTGCTGTACATTCATGGGAAATTACTAATCAATCATCCATGTTTGGTCAACCAAAGATTATG CAATTTTGGAGATCCAATTTCTTCTGCTAGTGTTACAATATTCAATTTTGTCAAATTTTACCTATAGATGTCTCTAAGTA AATAACAATGATTTCAACCATATTCAGCTGGCCTACTATGTAGTCTTTTTCCATGAGTGAAGCATAGTAGTTATTGTTAT GACTTCATGTTTTGTAGATGATTCTGCATTTTGTCATATCAATCTTAATTTCCACTTGGACTTAAACTGTTCCCCCTGCC TACCGTCCACTTGCTGTGCATGTCTTTTTACCTGCCAGCGGGCGAACTTTCATGATTGTACACTGCATAATTTAAAATAC TTTTCATGGTGAAAGTGGTAATTGTGCTTTTCACCCTCATCTTCATTCATGATGTTCTATTTGCTAACTTCGGCTCATAA GGGGATTACTTGTGTTATAGAAAAGAAATCTGAAACTTGCCCCTTCTTGTTGTTTGTAAATGCTCTCTCTTTTACATTTG AGAAAGTTCACATGATTCTTGTTATTGGCTTGTAAACAGGAATAGGACCGTTGAGGTTAAATCTTCCGGAAAAATTGGTT CAGGTACAACAGAGGTAGTCTCCCAAAAGTGCATGAATGACATGTAGAATTATTTGGTATTTATTGAGATCAAATCACTT TGGTGCATGCTTGTAATACTAATACCAATTATATTCTATGCTGTCTGCTTTAAGCCATGATCGAGGTTTTAAAGACTGGT TACTTCATAACTTTCATGAACTTTTGATTTAAAACAAATAAATACTGTTGATTTAAAAACAAGGAACTTGGTTGTTTTTT TTTTTGAAAGAAGGAACTTGGTTGTTGAAATAATGAAAAAGATTATAGAATAATTTATGACCAGAAAGATAAAATATTTC TTTTTACCAGAGGAGTTGAAGTGAGATAGCTTTAGTCATTGGATAGAACTCAAGTTAAGCAAATAAACAGATAGCCTTAA CTGGTGTATGATTATTATAGAGGATCCAGTTAGCTATGGTGAAATTACCTTCAATGCCAAGCATCCAACTGAAACATAAG CTTTTAATTGATTCTCAATAATTGTTTCATATGTTGTATTATGTAACTTTTATGTTATGCGATTTTATCCATAATCTATG TCTTTTCTAGTCTATACCCGTCATGGTGAAAGCAATGAAATTTGCATTTGAAGGACAGAGGTTAAGCCATAATATATAAC TAGTCTGTGACTAAGCATGCAAAGTATGATACCGATTTTGATACTTTTTGGACTTGTTTCGTTCTTTAGAAACTGGCCGG TTCATTCTTCTTACCTTTAGTCTGTACATTTTATGTATTGCATATTTGCATAGTTTTACATGTGTACATATTGGTTGGCT ATCATCAATCATGTGGTCTAAACTCTGGGACACTTTGGATATGATTTCATAGTTTTGCTATAAATATGCAACCATGCACT AAACTAATCGGGATCTCTGTCTCAGAGTTTTAAATAGCATATGAAAAATTGTTTCTGTATGCTATATCTAAGTTCCTTTC TAGACTCAGGCTTTACTGAATGATATTTTTATTTTTGAAATAACTATGCTTGTGGGCAAAGCAAAGATACCATTTTTAAT TTCTGGTTCAACAACATATTTTCTTGTGTTCATTGTATGTTCTGAAATCTTTATGGCAGATACCATTTTCAATGAATCTT AAACAGCGGGATGAGAATTTAGAAAGATTTTATGAGACTTTCCATGGGTCAGACATTAATATCCAGGTAAAATGTTCTTA GAAAATGCATAAATCATTTTATAAACCTATTTTTCTTCATTTTTTTCTTGTTAAGTTTTCACAAAATTTATACTGTTGGT GATGGATAGCCTCTATAGTATTTGTTGACTGCAGATATATCTCGTGGATACTTGCATAAATCATTATCAGCAACGACGGA GTTCATTATGGAAAGTGATAAAGGTATAAATTGTCTCTTTCTTATTCTTGATGTTTATAGATTTGTCATTGATCAAATTA CCAGTATCTCTTGTTTGTGCTTTCAGCTGATCTTCTACAAAGACCAGTTTCTCCAGAGACAGTCATCTTTTACATTACCC AGGACACTCAGAGACATCCTCTACTTCCTGAAATAAAATCTGGTGAGTGGATTTACCTTCGAAGAGTACAAATGAAAAGA GAATTTGTGAAATTGTTTCATGCCTTAAAATCTCACAAGTTGTCACACGCATCTTCTGTGGCAATACTAACTTTGTCGTG TCACATGTTAATAACCATCATGGTAAAATTTCATCAGTTGTGCACTTGAATATTTGAATTCTATTAAGTGCGGGCCTCTG CCCTCTAGTTTATTGTAAACATCAAAGGAAAAAGGTCATGTGGCTAATGCAAAGGCAATGTTGGATAGGTGGATTCCGGG TGACAGGAAAAATATGTACTCAGTGTTCTTTGTCTAGTCCTATTAATGGTGAGCTAACGGTAGAAGCATCTGCAGTTCCA ATTCAGTCAATTGAACTTCAGTTGTTTCGTGTTGAGTCCGTTCTTTTTGGGGAGAAAATTGTTAATGAGACCTCTCTGAT TCAAACAACCCAGGCAAGTGATGCTAGATTTGTATAAGAACATGTTAATTTAAATCAAGCTTTTAATTATTTTCTTTTTT TAACAGATAGCAGATGGAGATGTTTGCCGTAATTTGACTCTGCCTATCTATGTAATACTTCCCCGCCTTTTGACCTGTCC AACAATCTATGCCGGGTATGTTTCCAGCTCATGATCATTCTCATCCAGTGTATTTCACAAGAGTAATGGGGTATCCAATA AATACCGCATGCACACAAGACAAGATGTGCAGAGCTTCATAAAAAAAAATACTACGACCACTCTATGATGTGTGATCTTT TATATATGCTGCTTTTTGAGTTTGGCATTTTCCATTTCATATATATCTTCCCATGAAATACTTTATGCTTGTAAAAACTC ATGGATATGACTCAGTTTGTTGTATATTATATATTTGTATTATTATTTTCATGCAGTCCCTTCTCAATTGAGTTCAAAGT TGCCATTGTTATAAGCTTTCAGTCAGAGCTAGCAAAATTGCCCAGAAAGTCTGACTCCAGAACTCCCAGACTCTGGGTAG GTGCAGGTCCATTTCTCTAAATGGAATTTAGATTTAACATCTTTTATTAATCTTCACTTGGAAGGATGTTTTGGTTTTTA GCAAGCAAAGGTTGATTTCTGGTCTAACAATTTTTTCCTGAAATTTCAGCTGGCAATGGAAACATTACCGCTTGAGTTAG TTCGGTCAAAGTAAGATGATGTATGGTTTTGTCAAAATATGACTTGACTTCAAGAGGAGGATAACTATGGCTTTACCCAT GCAACATTTAGGATAGGTTTTGAGTATATTGGCTATTTGGTTTTTCATTTCCATCAACATTGGAAACATTCTGTGTCTAT ATTCATGCAACATTTCAGATATTAATATTATAGAGCATTTTCCCGTTCATGATCCAGAACAACATTTAACCACTGATGAC ATGTTTGTATCAGCTCAAGTGTTAGATACCAGAAAATGAAGTAACAGTATATAGGAATTTAGAACAAATAGAGCTTTATA TTATCAATGGAAATGGAGAATGATTTACAGAAAAAGAGAATGGAATCCTCTTCAACTGCCCAGAGCTAGGCTCCTTAACA GAAATGCACAATGCAATCTGCTCCTCTCACTAACTTGATTCTAACAGAATGATTCCTCTCAATCCTTTCCTCACTCCTTA TAGCTAACCTGATGTCAATAGCTCTCTCTCTCTCATGACACGTCACCTTCTCCCTAACTAACTATTAGTCACCATTCTCT TCCCCCTTCTAGAATACACCTGCCATATCTTGGGACCCTTTGGGTTCTGATGGGCTAAAGGTTCAATATGGCTTTCTTGC ATACCATTGGGCCTAACAATACCCCGTCCATTTGCCTGAGCCTTGTCCTCAAGGTTAAAAGATGGAAACTGACTCTTAAT GGTAATCAGGTCTTCCCATGTAGCTTCATCCAAGCCTTGTCCCTTCCACTGAACTAAAAGCTGTTGTATCTGTTCCCCTT GTACTGTCACTGTACGCTTGGCCAAAATGGCTTCAGGTTCAATCACAACCCCCTTTTCGCCTTCTAAGTCTGGCAAATCT TCCGCCTTGTGGTAGTTGCCTACTGCCTTCTTTAGTAAGGACACATGAAAAACTGGGTGTACTCGAGAACCAGTAGGCAA TTGCAACTGATATGCTACAGCTCCAACTCTTGCGACCACCGGGTAAGGACCATAGTATCGTGCAGCAAGTTTGGCATTAA TTCTTGCTACCACAGAGTTCTGACGGTGGGCCCTGAGCTTAACAAAGACCCATTCACCTATTTCAAAGCTGCGGTCACAT CTCTTTTTGTCCGCAAAGTGCTTCATTCGGTCTTGAGCCCTCAAAAGGTGTTGCCTGAGTTGTCTTATTGCTTCATCACG CTCCACAAGCTCCCTTTGCACTGCTTCAACCTTGACTTCTCCTTGTACCCAGCGAGTAATAACTGGTGGTGGTCTCCCAT ACACTATTTCGAATGGTGTTTGCCCTGTGGATACATGATAACTCGTATTATACCAATACTCAGCCCAAGGAACCCAATGT GCCCAAGATTTTGGCTGATCAGCAATGAAGCACCTCAAATAGGTTTCAAGACACCTATTTACTACCTCAGTTTGTCCATC AGACTCTGGATGGTAGGCAGTGCTCATCTTTAACTTGGTTCCTTGCATTTTAAAGAGCTCCTTCCAAAAGTTACTCATGA ACAAAGGATCCCTGTCACTCACAATGGATAAGGGCACACCATGAAGCCTCACCACCTCTCTCACAAATATGTCAGCTATC ACCTTTGTTGTATAGGGGTGCTTGAGAGGTACAAAATTAGAGAACTTGGACAACCTGTCGACTACCACCAACACAGCTTC ATAACCTTTGGATTTGGGTAATCCTGTTATGAAATCCATGGAAATATCTTCCCAAATTTGATTAAGAATTGGCAAGGGTT GCAAAAGTCCAGCTGGGGAGCTAGCCATGTATTTTTGCCTTTGGCAAATATCACATTTCTTGACAAAGTCCTGAACTGAA CCCTTCATGCCTACCCAATACACATTGGCTGCAATTCTTCTGTAAGTTCTATAAAATCCTGAATGGCCTCCTTGGGGTGT TTCATGGAATTCAGCCAATAACTCAGGGATCAAAGAAGACCCTCGAGGAATGACCAATCTCCCACCATACAATAAAATTC CTTGCTCCAAGGTGTACCCTGACTTCACTTCTTTTCCCTCCTGAATATCCTTGATAATTTGCTGTATCTCAGGATCTTGT GCAATTTCTGATAACAAATCTTGTTTACTGTCCCATCTCACACTGGTGACAATTTGTTTGAATTCCCCTGACTCATTGAT TCGAGAAAGGGCATCAGCTCCCCTATTCAACTTCCCAGGCTTATAACAAATGTCAAAATCAAATCCCAAAAGCTTTGCTG CCCAGTTTTGTTGTTCTACTGTAATTATTTTTTGTTGCAACAAATCTTTGAGACTTTTCTGATCAGTGGTTACCTTGAAT CTCCTTCCCAACAAATAAGGTCTCCAGTGTTGTATTACTAGAACCACTGCCATCAATTCTTTTTCATAAGCTGACTTTGT GAGATTCCTAACTCCCAGTGCCTTGCTGAAGTAAGCTATAGGCCTTTTATCTTGCATCAAAATTGCTCCCAACCCTCCTC CAGATGCATCACATTCAATTACAAATTCTTTAGCAAAATTTGGTAAAGCCAAGACTGGTGAAGTAGTCAATTTCTCCTTA AGAGCATCAAAGGCAACTTGAGCTTGTTCATTCCACTTGAAAGCTTCTTTTTTTGTGAGGTCAGTGAGAGGTCTGGCTAT CTTGCCATAATCTCTAATAAATTTTCTGTAATACCCGGTGAGGCCCAAAAACCCCCTAACCCCTTTTACATTCTTTGGGA CAGGCCAAGCCATAACACTGCTTACCTTGTTGGGATCTACTGCTACTCCATCTCCAGAAATCAAGTGTCCCAAGTATTCT ACAGATTGCTTCCCAAACAGACATTTCTTCTTATTAGCCACCAAACCTTGAGTTCTCAAAGTGGAAAGGACAGTTCTGAG ATGCTCTTGATGGGTTTGCCAATCCCTACTATATACCAAGGTGTCATCAAAAAACACTAGAACAAATTTTCGCATAAATG GACGAAATACCTCATTCATTAAACTTTGGAATGTTGATGGTGCATTCATGAGTCCAAAAGGCATCACTAAAAATTCATAG TGACCCTCATGAGTCCTGAAGGCTGTTTTATGGATATCTTCCTCTCTCACCCTTACTTGGTGGTAGCCTGACTTCAAGTC CAGCTTTGAGAAATATTTTCCTCCATGCAACTCATCCAACAATTCCTCTATCACTAGAATTGGGAATTTGTCTGGGACAG TAGCCTTGTTGAGGGCTCTATAATCAACACACATCCTCCAAGAATCATCATTCTTCTTTACCAAGATCACAGGACTTGAA AATGAACTCGTACTGTGTCTAATTATTCCTGTTTCCAGCATCTCTTGGACTTGCTTTTCTATTTCATTCTTGTGATGGTG GGGATACCTATAGGGTCTGACATTAACTGCTCCTTCTCCTTCCCTCAGAGTAATTACATGCTCCTTGTCTCTCCTTGGCG GAAGTCCCATTGGTTTCTGGAAAATGTCTCCATATTCTTCCAGCAACCCTTCAAGTTCCTGCAGCTTCTCAGCCTCAAGT GCAGAATACATTCCTTGGTTCTGACTTTCCTTCCCCCACTTCCTCAAATGAGGGTGGGATTTGCCAATGACACTTTGTAG AGTTTCCATGGACTCTAACCCCTCATCCAAACCCCTTAAAGTGACCCACTCATGGTTATGCCAGAAACTCATCGTTTTCC TTGCCCAGTTCACAATCATGTCTCCCAGAGTTCTCAACCATTCAATTCCTAATACAAGATCCACAACTCCCATCTCAAAC AATTGTGCATCAGTCACAAAGGGAATGTCCTCTACTTTTACCTGCAGCTTGGTGCATTTACCACGGGTTCTTGAGCAAAA ACCATCCCCCAATGTAATGCGCATGGGAGGTGTGTCCACCACTTGCCAACTTAGCTTGTGCACCAGCGTCCGGGAAATGA AATTATGAGTCGCTCCACTATCCACCAAGATCAAAATGGGAACCCCTTGAATTGTTCCTCGCAATTTGATGGTTTGCAGT TTGTGTCCTTCTTCCTGGCCCATCTGACACAGACTTATCATGCTCATCTCTCCCTCATTCTCATCCTCTTCATCTTCTAC CTCAATAGCTATCAATTTTCCCTCAGCATCTTTGTCGTCATCTTCCTCCATCAGCAGAACTCTTAATTGTCTATCAGGGC ATTGATGCATTGGGTGGTAGGCCCCTCCACACTTGAAACAAGCCCCTTTTGCCTCCGATCCATCAGCTCATTGTAGGATA AATGAGTAAAGCCTCTGTCGCGTGGATTTCCTCTTTTTCTATCCATCTGGGCCGGTTTATCCACTCTGGGCCCATTATTG GTTCCTTTGTTGTTGTTGCTTGGGCCTGTGGTCCCTTCCTTCCCCTGCTTAACAAAAACCCAGTCGGATCCTTTACTGGA CCCCTGATTGTTGGTTCGGGTCGACCCATACCCGGATCTGGGGTTGTCGAACATAACCCGATCCAGAATCACCCATCGTC TCCCTCTCCACAGCTCGAGCTATCTGCAGAACCTTCAAGCGATTTGGATCTCCAATCGTTACTAAACTCCTCACTCGTCC TCTGATTTCTCTCTTCAAACCATGTAGAAAGTACCCAAGGAATTGCTTGTCAGGCAATCTGGGTATTTGGGCCGTGAGAT ACTCGAAAGAGGATATGTATTCCTCCACCGATCCTCGCTGCCGGAGCTCCGTGAGCTGTTCGTAAATGTCGTCGTCGCCA TATTCGCCGTAGCGTTCAAGGAGTGCCTCCTTCAACCGATCCCAGGTGAGGCCTTCTTCTTCGTTGCTCAGTGAGTTGAA GAAATGGATGGTGGGACCATCCATACTAAGCTGTGCAAGACTGGTCTTCACTTCCGGGGCGGTGTTTTGTACCCGGAAAT AGACCTCTGCACGCGAGATCCATCCCGCCGGATCGTCGCCGTCGAACATCGGAAGTTCCACCTTTTTCATCGAGTGCCGG AACTCCGCCAGAGCATCTCCCTGCAAACGCGATGATCCATCCTTTGGTATCTCCTTCTCCGATCCGTCGCCAGCTCTTGC TCCTGAACTGCTTCCATCGCCGGTGTTCCCATCGTCGGCGATGGTTGTTTTCCCCAGGTTGCGTTCCAACAACGCAAGGA GCGCCGCTTGTCCTTGCTCCATGGCCATCAGAGTCGATTTCATCCCGGTAAGTTCTTCCTCCAAGGTTGCGATCTTTGCT TCCATGACCTTGACTGTTCCTGGCTGATTCTTTTTCGGTGGCATCCACTGGTTCTCTCTCGATTTGGTATCCGGCAGGTC GGACCAAATTGTTAGATACCAGAAAATGAAGTAACAGTATATAGGAATTTAGAACAAATAGAGCTTTATATTATCAATGG AAATGGAGAATGATTTACAGAAAAAGAGAATGGAATCCTCTTCAACTGCCCAGAGCTAGGCTCCTTAACAGAAATGCACA ATGCAATCTGCTCCTCTCACTAACTTGATTCTAACAGAATGATTCCTCTCAATCCTTTCCTCACTCCTTATAGCTAACCT GATGTCAATAGCTCTCTCTCTCTCATGACACGTCACCTTCTCCCTAACTAACTATTAGTCACCATTCTCTTCCCCCTTCT AGAATACACCTGCCATATCTTGGGACCCTT
CDS sequence (LotjaGi2g1v0196200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTGTTGAGCTCAAACTCTCTCGCTCCAATCGTATCTATCGCCCTTCGGAAGCTCTGGAAGGCAAAATCATCATCAA AACTCAGTCTTCAATTTCCCACTATGGAATTCGCCTCACTCTCAAAGGTTCCGTCAACTTGCAGGTTCGTGGAGGATCAG CTGGAGTTGTTGAGTCATTCTATGGTGTTATTAAGCCCATCCCAATTGTGAATAGGACCGTTGAGGTTAAATCTTCCGGA AAAATTGGTTCAGGTACAACAGAGATACCATTTTCAATGAATCTTAAACAGCGGGATGAGAATTTAGAAAGATTTTATGA GACTTTCCATGGGTCAGACATTAATATCCAGTATTTGTTGACTGCAGATATATCTCGTGGATACTTGCATAAATCATTAT CAGCAACGACGGAGTTCATTATGGAAAGTGATAAAGCTGATCTTCTACAAAGACCAGTTTCTCCAGAGACAGTCATCTTT TACATTACCCAGGACACTCAGAGACATCCTCTACTTCCTGAAATAAAATCTGGTGGATTCCGGGTGACAGGAAAAATATG TACTCAGTGTTCTTTGTCTAGTCCTATTAATGGTGAGCTAACGGTAGAAGCATCTGCAGTTCCAATTCAGTCAATTGAAC TTCAGTTGTTTCGTGTTGAGTCCGTTCTTTTTGGGGAGAAAATTGTTAATGAGACCTCTCTGATTCAAACAACCCAGGCA AGTGATGCTAGATTTGTATAA
Protein sequence (LotjaGi2g1v0196200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSVELKLSRSNRIYRPSEALEGKIIIKTQSSISHYGIRLTLKGSVNLQVRGGSAGVVESFYGVIKPIPIVNRTVEVKSSG KIGSGTTEIPFSMNLKQRDENLERFYETFHGSDINIQYLLTADISRGYLHKSLSATTEFIMESDKADLLQRPVSPETVIF YITQDTQRHPLLPEIKSGGFRVTGKICTQCSLSSPINGELTVEASAVPIQSIELQLFRVESVLFGEKIVNETSLIQTTQA SDARFV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 242 | 242 | 2.4E-90 | – | |
| Gene3D | 1 | 144 | 144 | 5.5E-30 | ||
| PANTHER | 1 | 242 | 242 | 2.4E-90 | ||
| SUPERFAMILY | 3 | 171 | 169 | 2.03E-5 | ||
| Pfam | 9 | 243 | 235 | 4.5E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intracellular protein transport | The directed movement of proteins in a cell, including the movement of proteins between specific compartments or structures within a cell, such as organelles of a eukaryotic cell. |
Expression pattern of LotjaGi2g1v0196200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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