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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0211500 |
| Transcript ID | LotjaGi2g1v0211500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Protein CASP; TAIR: AT3G18480.1 CCAAT-displacement protein alternatively spliced product; Swiss-Prot: sp|Q9LS42|CASP_ARATH Protein CASP; TrEMBL-Plants: tr|I1KIU7|I1KIU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0211500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:65897280..65909067) extracted from Lotus japonicus Gifu genome v1.2.
CTTATGGATTATGATGATGACGATGAATACTGATTAACGATCATTAATTAATTATGATATATCCAGTATGAACCCAGTTA AGTTAAGCTATTGCTTCATAAACAACCACTTAGATCCATTTTTCTGATCCTACATTACCGCCCAACGAGTTTGGTGAATT CACAAAACCTGAAACTCAGAGAGAAGAAGAAGAAGAAAGGGAAACAGATACTCTTCACAAAATGGATGCTCCGCAAGGTG GATCCGGATCCGGACCCGACCGGGACAAACCCAACGCTCCGATCCCCGTCGTCTCCGCCTTCTGGAAAGGTATTCAGCTG AATCTTCATCCACACGCTTTGCTTTTCTATCAATTTTTAGGGATTTGAGTTGATGATCGATAATCTATGACTGTAACGTG TTGCCACGGTGTTTGAATTGAGAATCGATTTTTTTTTTGTAGAATTTGATTTGGAGAAGGAGAAGTCGATTTTGGATGAA CAAGGGCTTCGGATTGCAGAGAACCAGGAAAACAGTCAGAAAAATAGGCGCAAGCTTGCTGAGAACACTAGAGGTATGCA TGCTTAGTGTTTTTGCTCCTGTTTTGTCCCGAAATCCAAATTGTGCTAGAGAAACATACACTTAAATGTTAAGCATTGTA CCAATCAAGAGTTTGATTAGGTGCTGGATACATTTAATAGAATTTTAAATAATTTTTATGAAATCAAAACTTATTAAACA ATTTGTATTGGATACCATACAAGGGTACCATGGTCACTAAAGTTCGAATTACAGGAGGAGCATAGCTTCACTCTTCTAGT CTTCTATTTCCATAAACTTTTTTGTTAGAAGTCCCGCATTGGCTAAAGATATGACATAGATAGCTTTTATAAATGGTAGA GCAACCCGCAACTGTTGAGCTAGCTTTTGGGTTGAGTTAGGTCTCCCAAATTTGTGAATTCAGTTTTCGTGGTTTTCTGC TTTGTTGTTACTGAATGACTGTCTAAGAAATCACAAATTGTGCTGCTTACAGGCTTCAAGAAAGCTTCACCTGAGGAGAA GTTAGGCTTGTTTAATAGCTTGCTTAAGGGCTACCAGGAAGAGGTTGACAATCTTACTAAGAGAGCGAAGTTTGGAGAAA ATGCTTTTCTCAACATCTATCAGAAGCTTTATGAAGCTCCGGATCCTTATCCAGCGCTTTCATCGATTGCTGTGAGTTCT AGTATTTCATGTGGGTGCTCCATGCTTTTGTTTGTACAGGATAGAACTCTTGCAATATTGTTGGATGTATTACATTTAGG TGCATGAGGTGGTTACAAATGTTGGGTTATGGAATCTAAATCTATAGATATAATGATGCTTTTGTTATCAATGATAACTA GGTGTGTCCTTCCACCTCAAAATGCATGCATCTTTAAGGATGTTTCCTTCCTTGCTATTAAATCTACTCTGGAACACGTT GTTACTATCTCTTTGGAACAATCTATTGCTTTTAGGGTACTTTCATCTCTTGACTTTCAGGGAGATTGGAAGCTCTGCTG CCTTCTCACTATGCATATTTAGACTTAACCACTTAGGCCTCCAACATCAACAGATCAACTTATTATATTTCTAAGAATTT CCATCTTCCCGCTTTTTATTTGTACGTGGAATTTCTTGTATGCATTGACATTAATTGTGCATGCATGCAAAGCTATGCAC ATATCTGCAATACTGCATGCTTGTTCATGTTCTGATATATTTTCTTTGGAAACAGGAGCAAGATCTCAAGTTATCTGAGA TTGAATCTGAAAACCGAAAAATGAAAGTTGAGCTTGAAGAATTCAGGACAGAGGCAACTCACTTGAAGAATCAGCAGGCA ACAATACGTAGACTTGAAGAGAGAAATAGGCAATTAGAGCAACAGGTTATTAATTCTTGAGATATTGTGTCTATATTGCA TAATGTCATAGACATGGTCTCTTTCATTTCTGAAGGCAAATACGTGTTGCCTTAATCGTTACTTCCCATATTTGGTTTGG TATGCATTATGCATGAATGTATTGTCAGGATCATAGAATGAGTACCTATTTTCATGATCATGATGGACTAACTCTCCCAA TGTTTAACCTTTTAGATCAAAACACATGAATGGTTTTTAACATATCATATCTAACACTAGTAGCCATTATTGTAATTTCC AATCCAATTTAATTTCATAACAATTTAAGATTGAACAAAATTTAGGTGTAATTGAAAATATAGCATAAACTAATTTTATC TAATATTTTTTTACTATAACTAACTTCAAATCTATTTTTGGCATTACATACTATCTTGTACTTGCAAAAGGGGCGAAATC TGACTTACTGGGATGCTGATATTGCACTCTAGTTTCAGTCTCAGGAGTTGGTACTTTTTGAATGAATTCACAAGCATTTG CACTTTCATGCTATGCATATATTTATACAATTTGGTGACCTTACACACACACACACACACCCACATACGCAATCAACTGC AACAAAAAAATTCATTTGTTATACGGAACTTTGTTAGTTGTGATGACCACCCTCAGACATCAATAAATGTTGGCAGAAAG GTTTTTAATGTTTACACTCATGGCCTGTAATAAATTACTTTCCTAGGTTAACTGAATTCCAACTCTCTACTATCATTTTG ATAAAGTAATAATAATTCTTTTCGATCAGAGTACTGGTATTTTGTTGTCATATGATAGTATGATAATATTCAATGTGACT AGACTTCTCAACATTTCTAACATTTTAAAACTTCAATTACAAATCAAACCTAACTATCTTTCACGGGTTTCATTAATTTG AATAAACTTATCCATGTCAGATGGAAGAGAAAGTGAAAGAAATTGTGGAGATTAAGCAACGCAGTCTGGCAGAAGAGAAC CAGAAAACATTGGAAATTTTGAAAGAAAGGTATCTTCTACTAATCTTGTGTGCTATTGCATTTTTTTATTCAGTTTAGTA TATGAGACAACTGCATTAGGGTATCTGTTTGTGTTAGCACTCCTACTATTGTCCAGGTGGATTATACAAAGAAGGGAGGA TAACCATGGGCCACATGAACCGAATGAATAATTTGGCTCCAGGGAACTACCTGCACACATAACAGGGTAGTTAGAATAAA CAAACAATCAGGACATGTAATATTAGAAGGGAAGGCAGGGAGAGGGAGGGGGCAAGCAAGGACTGGGTGTGGGATTGGAT GGGACATTACAGGTCTCTCAGATGACCTGTGTCATATTTTCTGTTTTTAATTCTTTTGGTTAGCTTTATGTTTGTTGTGA GTGAGGGAAAATATATGCTTGTGAATCTGTTTTTATACTTGGGAATTATTCCCTCTTCTCTATACAGTCAAATATCTAGG TTCCTAACAGTTGGCCCCTCTTGCTCTGGAATTAGACTGTTCACTACTATTCTATTGGAACTGTCCTCCGCCTTGTCATT GCTTCCTAAACTGTTGATCTGTTTATTCTATGCAGAGAACAAGTACTGCAAGATCAGTTGCAGAATGCCAAAGAAAGTGT TTCCAATATGCAGAAATTGCATGAGCTTGCACAAAACCAGCTGTTTGAACTCCGTGCCCAATCTGGTAATCAATTAATTC CCATTTCAATATTAGTCATACACTCTTCACCTGAATCTGCAACATCAGCTATTACATTACTGTATAATCTATTCTTTGGC ACTGTGCTTTCTTTCTGTATATAAAACCATAATTCTTTAATATTATTATGTCATGAAGAGAATAACCCCTTGTTTTCTTG AAATTTTCAGATGAAGATAGGGCAGCTAAGCAATCAGAGGTCACTCTTCTGATGGATGAAGTTGAACGAGCTCAAACAAT GCTTCTTAGTTTGGAAAGACAGAAGGTGCCATTTACAAGCTTTTATTTGATTTTAAAGTTTTAGTTTTTTATAATTGAGT CTTATGTGCTTTATATTCAAATTCTTCAAATTATGGTTCTTTCTCTCTAATTGTTTCATAAGTTATGAACTGCTGCAATC CACTATTTCTAGATCCATTCAAGTGTAGTGAAGATGATAATGTTAAGGTGGATGATTGGACATCGAAGAAAGATGAGATT AGAAATGAATATAATTTGGAGTAGAAGATGATAGGAACTTGACTTTGGTGGTTTGGTCATTTAAGAGTTGATCAAAATGG AAGGTAGTTTGATTAAAAAGGGTAGAAAACACCAAAGAAAAGATTGAGAGAAGTGATTGGTTGGCTAATGTTTTTACCAA GTCTTTGAGAGGTCATCGGGTTAATTAGATTTGTCATATTTGGTGCATATGACATATATGCTCCAGCTTGAGGGGAAGTG TTAGATATCTTGTAAATAGGTAGGATATAATGTATTAACTGTAATTAGGTAACATTATCATTGTAAATAGGGAAAGAATG CTTATATGTATTTATTGTAACTATTATATATAATGAGCTCCGTTGTGCAGTTGAGACACATAGATTCACTCCAATGCCTC TTGTATTCTTCTCATTTCACAGTTAATTCCCCCTTTTAAAAAAAAACATTGCTGCAATCAGTATGTACATAATAAATACA AAATGGGGAATCCTCCTGTATCAAACTTAAGAGAAGAAGCGGCAATTTTTTTCAAATTGAAATTATCTAAAATTTGCAAG AAAAATATTTCCAAAAGAAACAAAGTATTGGTTGCTAGGTAGATGTTGTCTTAAACTCTAGAACCCTCTTAAGTCTTAAC CATCACTTCTGTAATTACTTGTGTTTGAGTAGTCAACTATATATAAACTCATGTTTACCTCTCCTCTTGAGATATGGCTT GGATGTTCTTGTTGTATAAGTTTTGTAAGTATGTTTCCATTCTCTTGTTAAATTTTCTTAATTGGTGTTATACATTTCCC TTTTCGACTTTAAGTTTCTATCGATGACCTCGCCCTCCATACATTCTGGTCCAGTCTCATTGACCATGGACTTTCAGCTG TAGGCATGAAGAATAGGATTACAAGATTGTATTACCTACAAAGGCTGTTGTCAATGATTATAAGTTGAATATAATGTGTG GTTGTCATACAGTTTGGAATGAGCTATGTATTGGTCTAGGTATTTCTTTGGTCTTTATGATAAAAGGATACAGTTTTTCA GTTCATAACCTTCTCTTACTCTAAGCCTCTGTTTGGGTTGCAAACTTTGGGTGGATAGTAAAGGAAGAGGAGGGAACTAA AAGATTTGTCCCTTGCTTGGTACCAAAGGGTACAGAGGACTAGAGTTGGATGAAGATAATTTCTGCGGGCTCCGCATAAT TTACATCCGGCCCTTTCTGAAAAAGTTAGTAGAATTCAGCCAGACTTACTGTTTGTTCTCACGATCCTTCTGTGTCTATG CAGGGGATGCTCCAGTCACAGTTACACACGGCAAATGAAGATACTGAGATCAAGAAGAGGTATGGTAATACTCATCTTTT TTCTTTTTTGGAGATATATATAGCAAAGTTAGCCGTAATAGGAGTACAGATATACACATATTTCCATTTCTAAAATGAAT ATGATCTACGTTTTAACTTCCAAATTATAGATAACATTGTGGTGGTTGTTAAAATAGACCTATTTATTGTTACCAGACTA TCCATCTTTAGCATCCTTTTTAATTTGAATAAAATTTCTGTTCTATATTACCTTTTGGTCTTGGTACTTCTAAACATTAT AATTAAAGCATCTCATTTCAATTTTTTTAAAGATTAGCAGCTGAAATTTCTTCCTTATTGAAACAAATTAATTTTCATAA AATTTGTGTTGGACCTAACTCTACCCCAAAGATGCATATTACTTGAAGAGATTATCACAATTCTCCATATATGCTAAGAA ACACACCGGAAGCTGTTAAATATACAAGGATGTTTCCATTATTCTTATTGATTTAATCCAGCAACTTTAGCTTTATGTGT TATTACTTCAATTTTTTAATTTTTTTTGTACAAGTGTAAAAGCTAGTAAAACTGTAAAACAACCCCTTTCTTTATAAATT TCTGAGCGAGTGTCTGAACATGACCTGGACCCTATTCTTCACCTTTGGATTATCTATTTCTGTTAATAGAACTGATTATT TGGATCCCTCAAACCATAAAGTATTGTCAGCTAAGCAATTCATAAGCAGTCTCCAAAAAATCAAAACGATATTCTCTTAG ATGAACTCATCGTACAGAAAGTTATTCAGTGGTGCAGAGCTACTTGACTTGTTTTCATTTTCTGTCTGTCTGCCTCTCTT TCTATATATGCGTACTCACTTATCAATACTTCTCAAATCCTTCTTATTTCCTTCACTGTTTTAATTTTCTTTTAAATTAG ACCATAGTTGTCTGATGACTGTTGATTTTTATTTTGCAGTGATAATTTAGACACGAATAGTGTGCTTGAGAATTCTTTAA ATGCCAAAGAGAAGCTAATCTCTGAATTGAACATGGAGCTACACAATATTGAAACAGCCTTATCAAATGAAAGAGAAGAA CACATAAATGAAGTCAAGAAACTTACTGCAATGCTCAATGAAAAGGTGATATTTCAGTAGGTGAAGTCTTTTAATTTTAT GAACCTCCATAATGTGATATTTCAGGGCATCATAAGTGGTTATGAATACCTAAAGATTTTCATCCCTTACAGTATGTTTT GGGTTTTGAATTGACCAAGTCCCACATCGAATTTTGATATATTAACAATTACAAAGAAATCATACAAATTCCATTCACAC GGTATATAATTTAGTCCCTCCCTCTTCATTAAATTTTGAAACTATCTTTTTAGCTATCCCATTCACAAAATTCTCAATTC ATATTATGGTTTTGGGCACAGGGCGTCTCCATGAACCTCCCTTCTAGGATGATGGGGATTTGTTTTCCCTTGAGAAATGG AAGTGCATGATAGTACTCTTCTTTTGTAGTGTTTTGTGTATGAAAGACAAATTTAGTAGAACTAGTTCTGTTCATAGAAA ACAGTTATCTCACTGTATGAACAGTTTACAATACATGTCTGCTAATAATGTCATTTTTTCCCTGACTAATTTTTTTTATC ACCCTACTCTTAATATAGGAGACTGCTCTTGAGGAGATGAAGAAGGAGCTCCAAACAAGACCTACAGAAAAAATGGTTGA TGATCTGCGCAAGAAAGTGAAAATTTTGCAGGTGGCTTTTTTGTTCTCTTTATTCTCTAATGACCGTTTTATTGACCACT CGCTGTGGGCCTCACTATCCATCTAACTCCTAGTGAGCTATACATGCAGGCAGTGGGTTATAATTCAATTGAGGCTGAAG ATTGGGAAGTGGCTACAAGTGGGGAGGAGATGAGCAAGATGGAGTCTCTTCTTCTTGATAAGAACCGTAAAATGGAACAT GAACTAACACAGTTGAAGGTATGATCATGGAAATGGGACATCTGATTCCCACGAGATAATAGACTCACATAACACTGGCC TTTTATGTAGTGTAGCTTTAAAGGCCATCCCAGTTAAGAAAGGATCCCCTGTACATCCTGCATTCAAACAATGCCCAAGT TGTGATATCATCATATCAATAACAATTTCTTGTAGAAGACTGTTTTTTAAGATGATCTGCTGGTGGTATTGCTGTGCATT TTGAAGTATCTCTGTTATTCAGATGTGGTTCTACCATTTTCAGGTTACCCTTTCTGAGAAAACATCCTTACTGGAAACAG CAGAACAGAAGATTACAGAACTTGCAGCAAAGGTTAATGAGCAACAAAAATTGATACAGAAGTTGGAAGATGATATCCTG AAGGTTTCGAACAATTACCACTAACACCTTTTACTATATGAACCACTTATATGAATCCCTTTCTTGCTCATTTCTGTATA TGCATTAAAGTTTATGATGGGATTTTATGCTTTTTATTTATTTAAGGCACCTAGCTACCCCTTTTGATGCAGGGATATAG TTCCAATTCTAAAGATCGTAAAGGGACCTTCCTTGATGACTGGGATCTTTCAGAAGCTGGTGGCGGTGAGGCTTCTGAGG TAAATTCCTTGTCCATGCTGGCGTTCTTACTGCATTTTACTTTTGTTAGGAGAGCAATCTTCAACAGGAACCAAGTCTTG TGCATTCAATTGAAAAGACATGCTATCGCAATTGTTCTTTATTACTTTTTTCTTTTAGGAATACAGAAAACCTAATTAGT TCTCATTAATGATAGATTGATATCTTCTCATTAAAATCATCCTAGGAGTCCTTAAAGCTTATGCTTTTGGTATTTTAGTT CATGGCATGGTGTTAAAGCCTCTTTAACCAAGTAATCAATAGATCATTCCTTATCTTTCCCTTTGCCACACTGAAACTTA AATGTGATTTATCCATGCTTCAAGCCAATAATAGGCTTTGCATGGAAGGCTTTATACTTTATACCATGATTCAGAATCTT CTTAACAAATTAAGCTTTTGAGTCTGTCATGAACCAACTATCCCAAAAGCGTAAACTATTAGGTGAAGACACATGAATAG TTTTATATTGTATTTCTAACATTTCCTCTCACGTATGAGTTCATTGGGCTTGAGGTGTGGAGTGTGGATATTGCAGACTC ACCTACCTTGTATTGAAAATTTGAAATTCAATTATTATTTTTATTAGAAGAATAGTGGCAATAGAGATCGAACTCTAGAC CACTTGGTCATACAGACTCTGATACGATATCATAAATCAACTATCTCAACAGCTAAATGAATTAGGTGAAGACACATGAA TGATTTTTTTATTATATTTTGAACATGGTCAAATGGTTTAATGATTGCAATGTATTTCCTTGATATTTGAATGATGACTC TGGGGTCAATTGGTTATTTTCATAAAATTTAATCTATGCATTTAGAGTACCATGATTTTGGGAAACATGAAAAAAAATTT GCCGGATAGACTAAAGTGAGTGAAGTGAAACAATCACACAATTTCTGTCTGTTTGGAATTAAAGAATTCTTAAATTGGCT CTTTTGCAGCAGAGTACAGCAGACCAAAGGCAAGTGGCCTTGGACCAAGATCAGAGCTCAATGCTTAAAGTGATCTGTAA TCAGAGAGATCGATTTAGGACACGCTTGCGAGAGACAGAAGAGGTATGCTTTTAATTGAAATCAACTGATTTATTTGTAT TCCTTTCCGTGTAAACTTAGTTCGATCAAATTTTAGATTGTAGTGACCATTGACTTGGGTGAATTTTTCACCTTTGATAG GAAATAAGGCAGTTGAAGGAGAAGATTGGGGTATTAACAGTGGAATTGGAAAAGACCAAAGCTGATAATGTCAAACTATA TGGGAAGATTCGTTATGTGCAAGATTATAGTCTTGAGAAAGTGGTTTCTAGGGGTTCTAAAAAGGTATTCTGAATTGTTC TTTGTTTTAACTTAATGTTCTTTCATTATCGTAATTCTCTTTAAACTTTTACCCTGAACAGATTTGTTTTTCTTTTCTCG TTCAGTATGCAGAAGATGTTGAAAGTGGTTTTGCATCAGATGTTGAATCTAAATACAAGAAGATATATGAGGATGATATA AATCCTTTTGCAGCATTCTCAAAAAAGGTGAATCAGCTTGACTACTCTAATGAAGCACGGCATTGTTCTTAATTTACTGT TGATTTTAAGCTGGTATTTAGTTGCAAAGCTTCACTACTCTAATGAAATATGCATATGTTGAAACTGAACGTCTTAACTA AAACATCAAAACCACACAATAAGAACTTCAAAGGAATCTCTATCTGCTTTTGTGGTTGGGGTTGTCAGTGTCAGACACAC TTTCTCATCACAAGTATCTCTGTTAGTAAAATAATTTGAATAGAAAATGAGGTTTCAGGTGTATATCTGTGTTATTACTG AGAGTAGAAAATGATTTACTACTCATTGGAAACAACGAACAGTGCCAGTGATGTCCTTGATTAAAAGTCTAAACTTCCAT TTGTTAAATATGCATTTCAGTAGTTGCTGTTTCTGGTTGAAGTTATTGAACATTGTTACTCAGAACCCTGCTTATAGACC ATCCTCCACCATCTCCCACCATACCTGGAAAAGTGGGATGGATTGGCATTGGAGGAAATATACGGAAGTGATTGATTGGA AATGTGAAGTTTTCAATTGCTGTGTTGTGTTCTCGTATTAATTATTTATGTTTCTAATTATGAACTGCTCCGTCTATTTC CGTGTAACTAGGAAAGGGATCAAAGATACAAGGAATTGGGATTCAGGGACAGAATTACGCTCAGCAGTGGGCGTTTTCTC CTTGGTAACAAGTATGCTCGAATGCTTTGCCTTATTTCAGATATTCTCTAATGCAATGCTCTTGTTTTCTCCAAGTTAAA TAATTTGTTTACCTGTTTGACCCTGTTATATTGGAGTCAGAAAATTTATGGCATGTTTGAGTCCGTATTTCTGAAGCTTA GGCGGAACATGGGCAAATACGTTACGACTTACGAGCTCATAAATCCTTCGTATTTGTTTCACCAACCATGATACGTGATG AGATTTGCTTTCACTCGTTGGAAGCCCCAATCCATCATATACTACTGATCACTTATTGACACCATCTTCCTGATTTTTGT CTAGTGATATTATCATGCCTACTACCTCTTCATTGTTGGCATTTTGTTTGAACATTTATGTTTTAATGGTGGCTTTGGGA ACATTGAGTCTATTAGTCGTTCCTTGATTTGTGCATATGTTGACAAAGTATTATGAGTTGTTCTTTATTTGATAAAGAAT CCTCTTGCAGGTATGCCCGGACTTTTGCATTCTTTTACACCATTGGATTGCATGTTCTGGTCTTCACCTGTCTCTACCGA ATGTCTGCTCTGAGCTATCTTAGGTAAATATGATGACTAAATTTCACTGTCTTAACTGCTTTGTGGATTTCAGTGGCTCA ACCTTTTAATTTTCCTGCAGTAATGGCCCAGAGGAATTCCTAATTGGAGAGAAAAACGTTGATCTTCCACGCGCACCGTA GTGGGGATTCAACTCAATTTCTGTGGTGGTTTTCTCAACTTGAACAGTGCACGTGGTGGGTATGCAAACCCCCTTTCAGT GGTCTTTTTTGACAGACGGAACGAGAACATTTCAATATTCAAATATCAAGGGTGTTGTACATATAACTGTTGTTTAAAAA AAATGAAATATAGAGGCTTTTATTACACATGATTAATGGCAAAACACTCTAAAATCGATGTTCTCGGTCTTAAACTCTTA ATTAGTGAGATTGAAAACTCCATAGATTGTTATGTTTCAGAGAGAAGTGATTCCGGGAAATATAGAAGTAGCTTTTGTCG GATGGACGGGAAGTGCTTATGGGAGGATATTGAAAGTGGATCCAAGTTAGTTATAGCAACACGTTTGAACAGAATCCTTC TATCATTCCTCTGTTTTATTGGAAAGTGGACTGTTGACAAGTGAAGGATTATTCGATTGGTTTATTGCAACACGTACCAA GTTATTGGTTTATTACATGACATTGGTAGTTTTAAATGTTACTTTCCCTTGATGTGGACAACACTACTTGCACGAATTTC ATAGTACCTGGGTTGCCTGGATATAATCTATCTCAGTGTATATAGATGGTAAAACTCTTCCTTGAAGTTTTCAAATAAAC CAAGTCTGTTAATTAAACCGGATTAACTTTTTAGAATTAGCTTAATATGCGCTTCTTGGTTAGAGTATTCTAGCAGGTTA AGAATATTTTTATGGTATGGTGAACAAAATTTCAAACCAAAAAAATTAAGGGTTGACTAAAGTTTGGATTTAACCACTCT AGTACTAGGTGAAACAATGATATTTAAG
CDS sequence (LotjaGi2g1v0211500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATGCTCCGCAAGGTGGATCCGGATCCGGACCCGACCGGGACAAACCCAACGCTCCGATCCCCGTCGTCTCCGCCTT CTGGAAAGAATTTGATTTGGAGAAGGAGAAGTCGATTTTGGATGAACAAGGGCTTCGGATTGCAGAGAACCAGGAAAACA GTCAGAAAAATAGGCGCAAGCTTGCTGAGAACACTAGAGGCTTCAAGAAAGCTTCACCTGAGGAGAAGTTAGGCTTGTTT AATAGCTTGCTTAAGGGCTACCAGGAAGAGGTTGACAATCTTACTAAGAGAGCGAAGTTTGGAGAAAATGCTTTTCTCAA CATCTATCAGAAGCTTTATGAAGCTCCGGATCCTTATCCAGCGCTTTCATCGATTGCTGAGCAAGATCTCAAGTTATCTG AGATTGAATCTGAAAACCGAAAAATGAAAGTTGAGCTTGAAGAATTCAGGACAGAGGCAACTCACTTGAAGAATCAGCAG GCAACAATACGTAGACTTGAAGAGAGAAATAGGCAATTAGAGCAACAGATGGAAGAGAAAGTGAAAGAAATTGTGGAGAT TAAGCAACGCAGTCTGGCAGAAGAGAACCAGAAAACATTGGAAATTTTGAAAGAAAGAGAACAAGTACTGCAAGATCAGT TGCAGAATGCCAAAGAAAGTGTTTCCAATATGCAGAAATTGCATGAGCTTGCACAAAACCAGCTGTTTGAACTCCGTGCC CAATCTGATGAAGATAGGGCAGCTAAGCAATCAGAGGTCACTCTTCTGATGGATGAAGTTGAACGAGCTCAAACAATGCT TCTTAGTTTGGAAAGACAGAAGGGGATGCTCCAGTCACAGTTACACACGGCAAATGAAGATACTGAGATCAAGAAGAGTG ATAATTTAGACACGAATAGTGTGCTTGAGAATTCTTTAAATGCCAAAGAGAAGCTAATCTCTGAATTGAACATGGAGCTA CACAATATTGAAACAGCCTTATCAAATGAAAGAGAAGAACACATAAATGAAGTCAAGAAACTTACTGCAATGCTCAATGA AAAGGAGACTGCTCTTGAGGAGATGAAGAAGGAGCTCCAAACAAGACCTACAGAAAAAATGGTTGATGATCTGCGCAAGA AAGTGAAAATTTTGCAGGCAGTGGGTTATAATTCAATTGAGGCTGAAGATTGGGAAGTGGCTACAAGTGGGGAGGAGATG AGCAAGATGGAGTCTCTTCTTCTTGATAAGAACCGTAAAATGGAACATGAACTAACACAGTTGAAGGTTACCCTTTCTGA GAAAACATCCTTACTGGAAACAGCAGAACAGAAGATTACAGAACTTGCAGCAAAGGTTAATGAGCAACAAAAATTGATAC AGAAGTTGGAAGATGATATCCTGAAGGGATATAGTTCCAATTCTAAAGATCGTAAAGGGACCTTCCTTGATGACTGGGAT CTTTCAGAAGCTGGTGGCGGTGAGGCTTCTGAGCAGAGTACAGCAGACCAAAGGCAAGTGGCCTTGGACCAAGATCAGAG CTCAATGCTTAAAGTGATCTGTAATCAGAGAGATCGATTTAGGACACGCTTGCGAGAGACAGAAGAGGAAATAAGGCAGT TGAAGGAGAAGATTGGGGTATTAACAGTGGAATTGGAAAAGACCAAAGCTGATAATGTCAAACTATATGGGAAGATTCGT TATGTGCAAGATTATAGTCTTGAGAAAGTGGTTTCTAGGGGTTCTAAAAAGTATGCAGAAGATGTTGAAAGTGGTTTTGC ATCAGATGTTGAATCTAAATACAAGAAGATATATGAGGATGATATAAATCCTTTTGCAGCATTCTCAAAAAAGGAAAGGG ATCAAAGATACAAGGAATTGGGATTCAGGGACAGAATTACGCTCAGCAGTGGGCGTTTTCTCCTTGGTAACAAGTATGCC CGGACTTTTGCATTCTTTTACACCATTGGATTGCATGTTCTGGTCTTCACCTGTCTCTACCGAATGTCTGCTCTGAGCTA TCTTAGTAATGGCCCAGAGGAATTCCTAATTGGAGAGAAAAACGTTGATCTTCCACGCGCACCGTAG
Protein sequence (LotjaGi2g1v0211500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDAPQGGSGSGPDRDKPNAPIPVVSAFWKEFDLEKEKSILDEQGLRIAENQENSQKNRRKLAENTRGFKKASPEEKLGLF NSLLKGYQEEVDNLTKRAKFGENAFLNIYQKLYEAPDPYPALSSIAEQDLKLSEIESENRKMKVELEEFRTEATHLKNQQ ATIRRLEERNRQLEQQMEEKVKEIVEIKQRSLAEENQKTLEILKEREQVLQDQLQNAKESVSNMQKLHELAQNQLFELRA QSDEDRAAKQSEVTLLMDEVERAQTMLLSLERQKGMLQSQLHTANEDTEIKKSDNLDTNSVLENSLNAKEKLISELNMEL HNIETALSNEREEHINEVKKLTAMLNEKETALEEMKKELQTRPTEKMVDDLRKKVKILQAVGYNSIEAEDWEVATSGEEM SKMESLLLDKNRKMEHELTQLKVTLSEKTSLLETAEQKITELAAKVNEQQKLIQKLEDDILKGYSSNSKDRKGTFLDDWD LSEAGGGEASEQSTADQRQVALDQDQSSMLKVICNQRDRFRTRLRETEEEIRQLKEKIGVLTVELEKTKADNVKLYGKIR YVQDYSLEKVVSRGSKKYAEDVESGFASDVESKYKKIYEDDINPFAAFSKKERDQRYKELGFRDRITLSSGRFLLGNKYA RTFAFFYTIGLHVLVFTCLYRMSALSYLSNGPEEFLIGEKNVDLPRAP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 638 | 638 | - | – | |
| MobiDBLite | 1 | 20 | 20 | - | – | |
| PANTHER | 20 | 666 | 647 | 9.2E-215 | – | |
| PANTHER | 20 | 666 | 647 | 9.2E-215 | – | |
| Coils | 45 | 65 | 21 | - | – | |
| MobiDBLite | 47 | 68 | 22 | - | – | |
| MobiDBLite | 52 | 68 | 17 | - | – | |
| Coils | 84 | 104 | 21 | - | – | |
| Coils | 125 | 190 | 66 | - | – | |
| Coils | 193 | 241 | 49 | - | – | |
| Coils | 253 | 287 | 35 | - | – | |
| Coils | 299 | 358 | 60 | - | – | |
| Coils | 418 | 459 | 42 | - | – | |
| Pfam | 434 | 664 | 231 | 9.8E-63 | ||
| Coils | 510 | 551 | 42 | - | – | |
| Phobius | 639 | 660 | 22 | - | – | |
| TMHMM | 643 | 660 | 18 | - | – | |
| Phobius | 661 | 688 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Intra-Golgi vesicle-mediated transport | The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network). | ||
| Cellular component | Integral component of Golgi membrane | The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi2g1v0211500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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