Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

IPR012955

Source: InterPro

Description

IPR012955 is a CASP, C-terminal.

<p>This domain is the C-terminal region of the CASP family of proteins. These are Golgi membrane proteins which are thought to have a role in vesicle transport [[cite:PUB00016380]].</p>

This description is obtained from EB-eye REST.

Associated GO terms

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0006891
Biological process Intra-Golgi vesicle-mediated transport The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).
Subterm of
GO:0030173
Cellular component Integral component of Golgi membrane The component of the Golgi membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.
Subterm of

Associated Lotus transcripts 9

Transcript Name Description Predicted domains Domain count
Lj2g3v0744270.1
– PREDICTED: protein CASP-like [Glycine max] gi|356520513|ref|XP_003528906.1|
Domains
9
Lj2g3v0744270.2
– PREDICTED: protein CASP-like [Glycine max] gi|356520513|ref|XP_003528906.1|
Domains
9
Lj4g3v3098160.1
– Protein CASP [Medicago truncatula] gi|357521095|ref|XP_003630836.1|
Domains
6
Lj4g3v3098160.2
– Protein CASP [Medicago truncatula] gi|357521095|ref|XP_003630836.1|
Domains
10
LotjaGi2g1v0211500.1
– Protein CASP; TAIR: AT3G18480.1 CCAAT-displacement protein alternatively spliced product; Swiss-Prot: sp|Q9LS42|CASP_ARATH Protein CASP; TrEMBL-Plants: tr|I1KIU7|I1KIU7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0211500
Domains
10
LotjaGi2g1v0211500.2
– Protein CASP; TAIR: AT3G18480.1 CCAAT-displacement protein alternatively spliced product; Swiss-Prot: sp|Q9LS42|CASP_ARATH Protein CASP; TrEMBL-Plants: tr|I1KIU8|I1KIU8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0211500
Domains
6
LotjaGi4g1v0350600.1
– Protein CASP; TAIR: AT3G18480.1 CCAAT-displacement protein alternatively spliced product; Swiss-Prot: sp|Q9LS42|CASP_ARATH Protein CASP; TrEMBL-Plants: tr|G7L912|G7L912_MEDTR CASP carboxy-terminal protein; Found in the gene: LotjaGi4g1v0350600
Domains
9
LotjaGi4g1v0350600.2
– Protein CASP; TAIR: AT3G18480.1 CCAAT-displacement protein alternatively spliced product; Swiss-Prot: sp|Q9LS42|CASP_ARATH Protein CASP; TrEMBL-Plants: tr|G7L912|G7L912_MEDTR CASP carboxy-terminal protein; Found in the gene: LotjaGi4g1v0350600
Domains
9
LotjaGi4g1v0451700.1
– Protein CASP; TAIR: AT3G18480.1 CCAAT-displacement protein alternatively spliced product; Swiss-Prot: sp|Q9LS42|CASP_ARATH Protein CASP; TrEMBL-Plants: tr|G7L912|G7L912_MEDTR CASP carboxy-terminal protein; Found in the gene: LotjaGi4g1v0451700
Domains
10

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
mobidb-lite MobiDBLite 1 11.11