Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0278000 |
| Transcript ID | LotjaGi2g1v0278000.9 |
| Related isoforms 8 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IgA FC receptor; TAIR: AT5G09530.1 hydroxyproline-rich glycoprotein family protein; Swiss-Prot: sp|Q9BXM0|PRAX_HUMAN Periaxin; TrEMBL-Plants: tr|A0A072UVS4|A0A072UVS4_MEDTR Leguminosin group485 secreted peptide; Found in the gene: LotjaGi2g1v0278000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:74985922..74991261) extracted from Lotus japonicus Gifu genome v1.2.
TAAGAATTCTCAACTCTTAAGGATTTGTGGATGCAGAGGAATAAGATGGAGCCTGGAGGGAATCACAGCTGTATAGGCCA TCTCTTTTGTATGGAAGATATTGAAGATTTGGAGCAATTAGTAAGAGGCATAAACGTGTAAACAAGGATTTGCATGAAAA GCTTTTCAGAAGGTTTGGTTATATGTTAGAGATATGGAAGAAGTACTGGTATGGTTGATGAACCTAATTTTGACTTTTCT CATTAATAGTTTTTTTGTTAACCTTCTTATCTGTAGTCAAGGCATTAGAAAGTTTGCAAGCTGAAGGTATTTTGGTGTTC AGGTTACCTTTTTCACTGAGAATATAGCTTTCATGATAAAAGGGCATTTTTTAATTCGAAGGTCATGATTTTGTCTTCAT TCTCTTCTAATATAGATAGGTAAGTTGACCAACAATGGCTCTAATCAATTTTCTGATGAGATACTATATAGGTAAGAAGT TGAACGAACAATGCTGACAGTATCCCACCAACTCACCCTGATTGTCCTTTTACACAATTTTTTCTATAAAAGCCCCATAG ATAACATCTGCAGACTACACTAGCAAAGCATATCAAAACCATCATTTGCAAGCAGAGAGCTCCAACTCTTATTGATACTC CTGAAGTTCTAATCACCAGCTTGAATCAACCATGGCTTCAAGCAGTTTGTCAACAATCATCTTTCCACTTTTGGTTCTAA CTTTGTTGTCAGCAAACAGCCACATAATGGTTGCCGGGGCACGCATTCTTTTAGAGTCAAAGCCTGTCTTGCCTGAAGTC CCTGAATTACCTAAGCCAGAATTGCCTAAGATCCCAGAATTTCCAAAACCAGAACTGCCTAAACTTCCTGAACTGCCAAA GCCTGAGCTACCAAAGGTTAATGTTCCTGAATTGCCAAAACCAGAATTGCCTAAGGTCCCTGAATTGCCAAAGCCTGAAC TACCTAAGGTTCCTGAGTTGCCAAAGCCTGAACTACCTAAGGTTCCTGAGTTGCCAAAGCCTAATGTTCCTGAATTGCCA AAACCAGAATTGCCTAAGGTCCCTGAATTGCCAAAGCCTGAACTACCTAAGGTTCCTGAGTTGCCAAAGCCTGAACTACC TAAGGTTCCTGAGTTGCCAAAGCCTGAGCTACCCAAGGTTAATGTCCCTGAATTGCCAAAGCCTGAGGTACCAAAAGTTG AAGTCCCTGAATTGCCAAAACCTGAGCTGCCTAAGCTTAATGTCCCTGAATTGCCAAAACCAGAGATGCCTAAGGTCCCT GAGTTGCCAAAGCCTGAACTACCAAAGATCAATGTCCCTGAATTGCCAAAACCAGAAATTCCTAAGGTCCCTGAATTGCC AAAGCCTGAGCTACCTAAGGTTAATGTTCCTGAATTCCCAAAACCTGAGATGCCTAAGGTTCCTGAGTTGCCAAAGCCTG AGCTACCTAAGATTAATGTCCCTGAATTTCCTAAAGCTATTCCAACAACCAGTCCTTAAGTTGGAATTATGCCATACGTC GTCTTGTCTCAGGTCATATAGCTGGCAGTCCAGTGCCTAGTCCATGCTGTTTGATGGGAGTGATATGATATTATGATTTA ATTTTCAGTACTGTTTGATTTGTTATAAGCTATAGTTACATGAGAGTGATTGTCATGGTTCAGTATGAACCTTACTAAGA TTAGACATTATGTTTAGTTTGAGCTTGTTTAAATTGATTTTACCACTGCCTATTGCTGGTATCATATCCTTCATGTATAA GCAGTGAATTTAATAAGATTGCAATATTTTTTTTCATAGATTTCTATATTTCCAAGTTCTAATTTAGTTTGAGCTGTTAT GTTATTACGTTCATGAAATGAAATGTGGTCTGCAACTCTGAATCCGCCTTCCCAATTTCAGTTGGGAAATCTTACTCTTA AAACAAGAAAGAAGAATGATGTCCTTGGATCATTTAAAGATGATTTAATTTCTGAGTTTATTTGCATATATCAAATACTT AAGTAAACATTGATACTATCTAATACATTAGTAGGAGTTGAGCCATGAGTTCTTGGACAACAAGCAAAGTTACAATCTGA CTAACGTTTACACTGATATTCTGAGGTGGTTGAATGGTATCTTGTGTAGCCAGCCACTCTTTTACTAATACAATGAGTGT GGATATTAAGTACAAATTAATCATCAATGGGTTCTCTAACTTAATCCATGAGTTATAATCTCATTCTAGATTGATCAATA GTGTAATTCAAGTAAAAAATTGGGTGTAATTCTGAATATTAATTGAAGTGTTTGTTTGGATCCGCTTTAGTAGAATTAAG TGCGTGTTTGGACCAGCGTTAACAGAATTAAGCCTGTCCATAATGAATTGAGTCTTGTAAACGTGAGTTAAAGTGATGTG AATCATGTTAAGATACCTTTAACAAAAACGTGATTTCCGTAAAAGAATAAATAAAACGTAGCCACATAACTTTTTTTTAG CAACCTCACATAATAAAACTTATCTATCTGTGTTGCCTCCAGCAGTAAAAAAGTTCAGTGTTCATAATGGTAGCTTTCCC TCTCTTCTTAGGCCCAATGCCCCCATCCACAGAGGTTGTTCCTCGCCACCTTCTTTCTTTCTCAAACTTCATGGTTAATG GTTGGTTGGTTCTTTGAAATGGTGAGATAATGATTAGCACACTGATTCATATGCTTGGTTTGAAAGGGATTTGACAAGTT GATGAGAATTGAGCACTTTTTTGCTTGTGCAATTTTATCTGTGATAGGTAATCTTTTACAGTAAAATCCAGATGCTTGCA TAATCCACTACCATAAGTATATTATATTTCAACCAGTCATAATACTTGGAAAGCTGCAGCATGGTTTGATATGAATTTAA AGCTTGATGGAAAGGTAAAATTATATTACATGCCAGCATTATTAAATCAATATGGGCAGCCCAGAAACCAAGCATGAAAG ATATTAAGAAGCCTTCTGCATTTTAAATTTGTATACAGGTCTAATAGTGAGAGCTTCGATTGTTGTCATTCCATCTCCCA ATTATGCTATTGAGACTATTTCAACCAGACAAGATACATCAGTACTAACATGTCTAGAAAGCTCTTCTTCCCTTTCAAAT TTCTACTTAACTTTGTCATCACACACGAAATTGTGATCAGTCAGAATTGGGTGATGGTATCTTGGGCTATAATCATAGTT CTTCTTGGACTTTATGCTTAAGATTTTATCAACATGATCCTTGAAGATTGGGTAATGTCAATTATTAACATTTTGGTAAA TACTGCAGAAGGCCAAAACTGTGTATACTCAATCGAAGCAACAATTAATTATCTTTAGTTTGTTTGAGTAAAAAACATCC ACATTTAGGGTGCTATGGTTTTATCCAAATTACATTTTCTATCATGTCATCTTTTATTTAGTAAATGTCTACTTGTGAGG TCGTAACATGTGCTGCCATTCTTATGATTTTGCTGGCAATGGGAATAGCAGTAATGATAGATGTGATAATAAATCATGTT CTGTCACTACAGCAGCAAATTGAGATCAGATTATTGTCACATATCCGTATTAGAGTTTTTGAAATGTAGTGGGACAGCAA CAACACAAATCACAAATAACTCAATAATAATACTAGACATTTGTATTTTGTAGGGTGGAAAAGTTACAAGATTTGAAGCA ACTAATCAGAGGCATAAACGTGTAAAGAAAAGGCTATGCTTGGGTTTGCATGGAAAGCTTTTCAAAAGGTACTGATATGG TTGATTAACCTAACCTTTGACTTTTCTCATACATTCTCACAGAATACTTTACTAAGCTTTTTGGGGTTCTGAAGTTGAAT CTAGTTTACTGACAAGGCATTAGAAAATTTGCAAGCTAAATAAAAATAGTTTTGGTTGGAAAAAATCTCTAGTAATCCTT GGTTGTGATGTTGCTTTGTCACTGAGAAAATTGGCTTTCATGGGTAAGTGGTATTTCTTATTTGGAAGGTCCAAAATACC TTCATAGTTTATTGCCTTCTAATGTAGATTGGTCAGTTGACCAACAACGTTTCTTATTTTGTTTGATGAGATACTATATA GGTAGGAAGTTGAACTAACAACACTTTCATTATCCCTCCAACTCACCCTGCTTGTCCAAATAGTACACAATTTCATCTAT AAAAGCCCCATAGATAACACCTGCAGAGCATATCAAAACCATTTGCAGAGAGTTCAAACTTCTATTGAACCTCCTGAAAT TCTAGTCACCAGCTTGAATCAACAATGGCTTCCATCAGTTTGTCAACAATCATTTTTCCATTTTTGTATCTTACTTTGTT GTCAGCAAACAGCCCCATAATGGTTGCCGGGGCACGCATTCTTTTAGAGTCGAAGCCTGTCTTACCTGAAGTCCCTGAAT TACCTAAGCCAGAATTGCCTAAGATCCCAGAATTGCCAAAACCAGAACTGCCTAAACTTCCTGAATTGCCAAAGCCTGAG CTACCAAAGGTTAATGTTCCTGAATTTCCAAAACCAGAATTGCCTAAGGTCCCTGAATTGCCAAAGCCTGAACTACCTAA GGTTCCTGAATTGCCAAAGCCTGAGCCACCTAAGGTTAATGTCCCTGAATTGCCAAAGCCTGAACTACCTAAGGTTCCTG AGCTGCCAAATCCCGAGCCACCCAAGGTTAATGTACCTGAACTGCAAAAGCCTGAGCTACCTAAGGTTAAGGTCCCTGAA TTGGCAAGACCTGAGCTACCTAAGCTCAATGCCCCTGAATTGCCCAAACCAGAAATGCCTAAGGTCCCTGAGTTGCCAAA GCCTGAACTACCAAAGATCAATGTCCCTGAATTGCCAAAACCAGAAATGCCTAAGGTCCCTGAATTTCCAAAGCCTGAGC TACCTAAGGTCCCTGAATTTCCAAAGCCTGAGCTACCTAAGGTTAATGTTCCTGAATTGCCAAAACCTGAGATGCCTAAG GTCCCTGAGTTTCCAAAGCCTGAACTGCCTAAGGTTGATGTCCCTGAATTGCCTAAAGTCCCTGAAATTCCTAAATCCTT TCCAACCACCAGTCCTTAAGTTGGAATCATGTCTTTTTTCATGTCATATAGCTTCCTATTATCCAGTGCCTAGCTCATGC TGTTTGATTTCCAATTCTTTATAAAATTTTCATATGTTGTAGCTACATGAGAGTGGTTGTCATGGTTTAGTATGAACCTT ATTAAATTACACATTACGTTTAGTGTCAAGCTTGTTTAGTTGATTATACTACTGATATTGAGGGTCATATCATATCCTTC TTGTAAAGTGTCATGAATTTAATAAGATTGTATTTTTTATTCAGAAATTTCCAAGATTTT
CDS sequence (LotjaGi2g1v0278000.9) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCAAGCAGTTTGTCAACAATCATCTTTCCACTTTTGGTTCTAACTTTGTTGTCAGCAAACAGCCACATAATGGT TGCCGGGGCACGCATTCTTTTAGAGTCAAAGCCTGTCTTGCCTGAAGTCCCTGAATTACCTAAGCCAGAATTGCCTAAGA TCCCAGAATTTCCAAAACCAGAACTGCCTAAACTTCCTGAACTGCCAAAGCCTGAGCTACCAAAGGTTAATGTTCCTGAA TTGCCAAAACCAGAATTGCCTAAGGTCCCTGAATTGCCAAAGCCTGAACTACCTAAGGTTCCTGAGTTGCCAAAGCCTGA ACTACCTAAGGTTCCTGAGTTGCCAAAGCCTAATGTTCCTGAATTGCCAAAACCAGAATTGCCTAAGGTCCCTGAATTGC CAAAGCCTGAACTACCTAAGGTTCCTGAGTTGCCAAAGCCTGAACTACCTAAGGTTCCTGAGTTGCCAAAGCCTGAGCTA CCCAAGGTTAATGTCCCTGAATTGCCAAAGCCTGAGGTACCAAAAGTTGAAGTCCCTGAATTGCCAAAACCTGAGCTGCC TAAGCTTAATGTCCCTGAATTGCCAAAACCAGAGATGCCTAAGGTCCCTGAGTTGCCAAAGCCTGAACTACCAAAGATCA ATGTCCCTGAATTGCCAAAACCAGAAATTCCTAAGGTCCCTGAGTTGCCAAAGCCTGAACTACCAAAGATCAATGTCCCT GAATTGCCAAAACCAGAAATGCCTAAGGTCCCTGAATTTCCAAAGCCTGAGCTACCTAAGGTCCCTGAATTTCCAAAGCC TGAGCTACCTAAGGTTAATGTTCCTGAATTGCCAAAACCTGAGATGCCTAAGGTCCCTGAGTTTCCAAAGCCTGAACTGC CTAAGGTTGATGTCCCTGAATTGCCTAAAGTCCCTGAAATTCCTAAATCCTTTCCAACCACCAGTCCTTAA
Protein sequence (LotjaGi2g1v0278000.9) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSSLSTIIFPLLVLTLLSANSHIMVAGARILLESKPVLPEVPELPKPELPKIPEFPKPELPKLPELPKPELPKVNVPE LPKPELPKVPELPKPELPKVPELPKPELPKVPELPKPNVPELPKPELPKVPELPKPELPKVPELPKPELPKVPELPKPEL PKVNVPELPKPEVPKVEVPELPKPELPKLNVPELPKPEMPKVPELPKPELPKINVPELPKPEIPKVPELPKPELPKINVP ELPKPEMPKVPEFPKPELPKVPEFPKPELPKVNVPELPKPEMPKVPEFPKPELPKVDVPELPKVPEIPKSFPTTSP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 120 | 120 | 9.7E-100 | – | |
| PANTHER | 1 | 120 | 120 | 9.7E-100 | – | |
| SignalP_EUK | 1 | 21 | 21 | - | – | |
| Phobius | 1 | 7 | 7 | - | – | |
| Phobius | 1 | 23 | 23 | - | – | |
| TMHMM | 5 | 27 | 23 | - | – | |
| Phobius | 8 | 19 | 12 | - | – | |
| Phobius | 20 | 23 | 4 | - | – | |
| Phobius | 24 | 316 | 293 | - | – | |
| MobiDBLite | 44 | 316 | 273 | - | – | |
| MobiDBLite | 69 | 86 | 18 | - | – | |
| MobiDBLite | 104 | 127 | 24 | - | – | |
| PANTHER | 118 | 188 | 71 | 9.7E-100 | – | |
| PANTHER | 118 | 188 | 71 | 9.7E-100 | – | |
| PANTHER | 165 | 213 | 49 | 9.7E-100 | – | |
| PANTHER | 165 | 213 | 49 | 9.7E-100 | – | |
| PANTHER | 177 | 237 | 61 | 9.7E-100 | – | |
| PANTHER | 177 | 237 | 61 | 9.7E-100 | – | |
| MobiDBLite | 185 | 199 | 15 | - | – | |
| MobiDBLite | 206 | 223 | 18 | - | – | |
| PANTHER | 215 | 272 | 58 | 9.7E-100 | – | |
| PANTHER | 215 | 272 | 58 | 9.7E-100 | – | |
| MobiDBLite | 230 | 247 | 18 | - | – | |
| PANTHER | 238 | 309 | 72 | 9.7E-100 | – | |
| PANTHER | 238 | 309 | 72 | 9.7E-100 | – | |
| MobiDBLite | 265 | 282 | 18 | - | – | |
| MobiDBLite | 283 | 299 | 17 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0278000.9, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…