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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0294800 |
| Transcript ID | LotjaGi2g1v0294800.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ureide permease-like protein; TAIR: AT2G03530.1 ureide permease 2; Swiss-Prot: sp|Q9ZQ89|UPS2_ARATH Ureide permease 2; TrEMBL-Plants: tr|A0A151TF86|A0A151TF86_CAJCA Ureide permease 1; Found in the gene: LotjaGi2g1v0294800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76946804..76950246) extracted from Lotus japonicus Gifu genome v1.2.
ATGTATATGGTGGAGAGCAAGGGAGGTGCCATAGTTTGCATGCTGTTGTCCCTTTTGTTCTTGGGGACATGGCCTGCTGT TATGACTCTTTTGGAAAGGCGAGGTCGTCTTCCTCAGCACACTTATCTTGACTACACACTCACCAATCTCTTGGCTGCTG TCATCATTGCTTTCACCTTTGGTCAGATTGGTTCTGATCAGCCTAACTTCTTATCTCAGTTTTCTCAGGTAGGTACCTTA TCTTATCCTATCTTGACCTGTGTTTTCTATCTAAAATTAAGGGCAGTACCATCATGAACTTAAGTGAGATTCATCCTTGA ATATAGAACCAAGATCCCTCATTTTACATGATATTTTTAGTTACATGAGATTTTTTAGGAACTAACATACATGCAAGCAT GTTTGTAAATTCTTTTACAATTTACTCTGAACCGGAATCAATTTTGGGAAAAGCTTATGTGAGTAGCTCGTGTTTTTTAA TTGATTCTGAGATAAAAGATATTGATGCGAACATGCTATTGGCGGTTTTATTTTTCATTTGCAGACAATTCTGATCTGAT AGATTTGGATGTTTCCTGTTTGTAAAGATGACTTAATTTTGTTCGAGTAAAAAAGACAACTTTTTTAATATAATTTAATG TAATAAATGAATCTTATAACCGATCATTTAAATGTTTATATGATAACAACAGTGTTGTCTTTCTTTTCTTTACAGGGACT AAAATTACTGGGAAAATATTTGATTTATAATCAAATTAACTTATTATACTATCTCTGCAGCTCTCTCTCTTTTATAGTAG AAAAGGTGGAGAGAAACTCAAATTTGGAATTTCCTCTTCCCTTTTTGCTATAAAAGGGAGATGTAAGTATAATATGAAAA TTTTGAGTCCCAAGAAAAATGAAATCAAGAAATGTGTCTTGAATGTCAACCTGAATTACATGCATCTTTTTTTGTCAGCC TGAAACTTTATACTATAGTGACTATTATTGTTCAGGCTTGTGTATGAATGTGCTATGGTATTTGATTCAGGATAACTTTC CTTCTGTTCTTTTTGCCATGGCGGGTGGGGTGGTCCTCAGCGTTGGAAATCTGTCCACGCAATATGCTTGGGCTTTTGTT GGATTATCAGTAGTAGAAGTGATCACATCAAGCATAACTGTTGTTATAGGTATCCTACTCTCATGAGTTTCTTAGATTTT TGGTTTTATACTTAATAAATAGAAGTTGCCATTATAGCTTGCTAGTTGCTATGTTCCTCTGGTGTTGAACATTATAGCAC TTTTCTGTTCTGATTGTTTAACAGGAACAACCTTGAATTACTTTTTGGATGACAAAATTAATAAAGCTGAGATTCTTTTC CCTGGAGTTGGATGCTTTTTGATTGCTGTTTGTCTTGGATCTGCTGTTCATTCATCTAATACTGCTGATAATAAGGCCAA GCTCGAAAATTTTTCAAACGACTACAAAGATGCAGCTCAGTAAGTGTTGTTTTGTTTTGAGTTATTTCAGGATATGATCA TTGACTACTGTTGATATTCTCAGCTAATTTCTGCTTCTCTGCCTCCAAAAATTTAAACAAAAAAAAAAGGTCATGCTTTC TATAGGATGAAGTTAAGCTGTCCTGGGAACTTAGTCATGACTATCATGCTTAAATTATAATATATAGACCCCATTCGGAT ACGAACTAAAGAAAGCTTATTGGAGCTTATCTAGTAGAAAAATCACTGATTAGTTTCAATGAATGCTCTTTTGTCTCCAA ATAGACTCATATTATCATAATAGATTGTAAGAAGTAACACAGTCACAATTAACTCAACCAGTGTTAGGAGCATTTTTTCT CCAATGTCTAAAACATAATTTGTAAAGATAACTAAAGCTGTTCACTGTGTAGAGACGACTTTCAATTGCTATACTTTTTT CTGCACTACTACAGAGAAGAAAAATTGATTACCTTATTTTAGGGGAAGAAGCAATAATTTGAGTTGGTTTTGAACTCTGG ATGGGATGGTTATCATAGTTTTTTATCACTGCTATTTGTTAAGAACTATGATTTTAGTGTGTTCTCTTGGATAATCTAAA GCATTATTTACCACCATATTTTGTTCTTTTGCCAGGGGAATTAATTTATCCACATTGAAAGAAACAAGTGAAGGTAACAA TATCTAATTACCTATTTTGTGGGATTGTTTTCCTTGCTAAATGCTGGCCTTTTCCCTCTCCTTTGTTAATAGCTGATTCA AAGGATCCAGAGAAGGGAAATGATTCTGCATACAAGGCCAAAAAAGGAACTGCAGTTTTTCTTATAGAGCTTGAGAAAAG AAGATCCATTAAGGCAGGTGGTTATGCCTTATGGAATTATGACTACAGTTTTCACAAACCTTTTCACTTTATCGTGTAGC ATTTAGAGCCCGTTTGGATACGGATCATAGAACACTTATTGGAGCTTCTCTACTAAAACATGCACTAAATAAGATACAAA AAGTGATCTTTGCTCCGCATCCAAAAGGGCTCTTAGACAATGAAGAATGTTTGATGTATATGGAAGTACTCTTGGATTAA ATCTTTTGCAGGTGTTTGGGAAGAGCACTTTGATGGGATTAGCTATAACTTTCTTTGCTGGATTTTGCTTTTCCCTATTC TCACCAGCATTCAATTTAGCAACAAATGACCAGTGGCACACTTTAAAGAAAGGGGTTCCCCATTTGAGTGTTTACACTGC CTTCTTTTACTTTTCAGTCTCTTGTTTTGTTGTTGCCATCATTCTAAACATCACCTTCCTCTACCACCCTGTCTTGAACT TGCCCAAGTCATCACTGAAGGCTTATTTGAGAGACTGGAATGGAAGAGGTTGGGCTCTTTTGGCTGGTCTCCTTTGTGGG TTCGGGAATGGCCTTCAATTTATGGGAGGTCAAGCTGCAGGATATGCTGCAGCAGATGCTGTTCAAGTGAGTTTTTATTT CACTTTCTTTTCATGCCTATAAAGAACATTACCAAGAAATTTAAGAGCACTTATTGGAGCTTATCTGGTAGAAAGAACAC TGAATAAGCTCTAATAAGTGTTCTTTGGTCTGTATCCAATAGACTCATAGTGCATGTTTGTAAATTCTTCTACAACTGGT TTTAAAACCAAAAACAATAAATGAGAATAAGCTTCTTTGAGAATCTTTTAGGTGATAGAATTGATTCAGAGAAAACAAAA GTTGATCCAAACATTCTAATAGTATTTGAAGTATGTTTGTTCCTTAAATCATGAATTCACGGTAACTGATCAGGAGTGTT GTTTGTACAGGCACTACCACTTGTAAGCACATTTTGGGGTGTCGTTTTATTTGGAGAGTACCGCAAATCATCAAAGAGGA CATACATGCTGCTAGGGAGCATGTTGCTTATGTTTATTGCAGCGGTTGCTATACTCATGGCATCGTCGGGGCATCGAAAA TGA
CDS sequence (LotjaGi2g1v0294800.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTATATGGTGGAGAGCAAGGGAGGTGCCATAGTTTGCATGCTGTTGTCCCTTTTGTTCTTGGGGACATGGCCTGCTGT TATGACTCTTTTGGAAAGGCGAGGTCGTCTTCCTCAGCACACTTATCTTGACTACACACTCACCAATCTCTTGGCTGCTG TCATCATTGCTTTCACCTTTGGTCAGATTGGTTCTGATCAGCCTAACTTCTTATCTCAGTTTTCTCAGGATAACTTTCCT TCTGTTCTTTTTGCCATGGCGGGTGGGGTGGTCCTCAGCGTTGGAAATCTGTCCACGCAATATGCTTGGGCTTTTGTTGG ATTATCAGTAGTAGAAGTGATCACATCAAGCATAACTGTTGTTATAGGAACAACCTTGAATTACTTTTTGGATGACAAAA TTAATAAAGCTGAGATTCTTTTCCCTGGAGTTGGATGCTTTTTGATTGCTGTTTGTCTTGGATCTGCTGTTCATTCATCT AATACTGCTGATAATAAGGCCAAGCTCGAAAATTTTTCAAACGACTACAAAGATGCAGCTCAGGGAATTAATTTATCCAC ATTGAAAGAAACAAGTGAAGCTGATTCAAAGGATCCAGAGAAGGGAAATGATTCTGCATACAAGGCCAAAAAAGGAACTG CAGTTTTTCTTATAGAGCTTGAGAAAAGAAGATCCATTAAGGTGTTTGGGAAGAGCACTTTGATGGGATTAGCTATAACT TTCTTTGCTGGATTTTGCTTTTCCCTATTCTCACCAGCATTCAATTTAGCAACAAATGACCAGTGGCACACTTTAAAGAA AGGGGTTCCCCATTTGAGTGTTTACACTGCCTTCTTTTACTTTTCAGTCTCTTGTTTTGTTGTTGCCATCATTCTAAACA TCACCTTCCTCTACCACCCTGTCTTGAACTTGCCCAAGTCATCACTGAAGGCTTATTTGAGAGACTGGAATGGAAGAGGT TGGGCTCTTTTGGCTGGTCTCCTTTGTGGGTTCGGGAATGGCCTTCAATTTATGGGAGGTCAAGCTGCAGGATATGCTGC AGCAGATGCTGTTCAAGCACTACCACTTGTAAGCACATTTTGGGGTGTCGTTTTATTTGGAGAGTACCGCAAATCATCAA AGAGGACATACATGCTGCTAGGGAGCATGTTGCTTATGTTTATTGCAGCGGTTGCTATACTCATGGCATCGTCGGGGCAT CGAAAATGA
Protein sequence (LotjaGi2g1v0294800.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYMVESKGGAIVCMLLSLLFLGTWPAVMTLLERRGRLPQHTYLDYTLTNLLAAVIIAFTFGQIGSDQPNFLSQFSQDNFP SVLFAMAGGVVLSVGNLSTQYAWAFVGLSVVEVITSSITVVIGTTLNYFLDDKINKAEILFPGVGCFLIAVCLGSAVHSS NTADNKAKLENFSNDYKDAAQGINLSTLKETSEADSKDPEKGNDSAYKAKKGTAVFLIELEKRRSIKVFGKSTLMGLAIT FFAGFCFSLFSPAFNLATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFLYHPVLNLPKSSLKAYLRDWNGRG WALLAGLLCGFGNGLQFMGGQAAGYAAADAVQALPLVSTFWGVVLFGEYRKSSKRTYMLLGSMLLMFIAAVAILMASSGH RK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 402 | 402 | 6.3E-237 | ||
| PANTHER | 1 | 402 | 402 | 6.3E-237 | – | |
| Phobius | 1 | 5 | 5 | - | – | |
| Phobius | 6 | 30 | 25 | - | – | |
| TMHMM | 10 | 32 | 23 | - | – | |
| Phobius | 31 | 41 | 11 | - | – | |
| Pfam | 41 | 397 | 357 | 1.8E-198 | ||
| Phobius | 42 | 61 | 20 | - | – | |
| TMHMM | 45 | 64 | 20 | - | – | |
| Phobius | 62 | 80 | 19 | - | – | |
| TMHMM | 79 | 97 | 19 | - | – | |
| Phobius | 81 | 98 | 18 | - | – | |
| Phobius | 99 | 104 | 6 | - | – | |
| TMHMM | 102 | 124 | 23 | - | – | |
| Phobius | 105 | 127 | 23 | - | – | |
| Phobius | 128 | 138 | 11 | - | – | |
| Phobius | 139 | 158 | 20 | - | – | |
| TMHMM | 139 | 158 | 20 | - | – | |
| Phobius | 159 | 231 | 73 | - | – | |
| TMHMM | 232 | 254 | 23 | - | – | |
| Phobius | 232 | 254 | 23 | - | – | |
| Phobius | 255 | 273 | 19 | - | – | |
| Phobius | 274 | 299 | 26 | - | – | |
| TMHMM | 274 | 296 | 23 | - | – | |
| Phobius | 300 | 319 | 20 | - | – | |
| TMHMM | 317 | 339 | 23 | - | – | |
| Phobius | 320 | 339 | 20 | - | – | |
| Phobius | 340 | 344 | 5 | - | – | |
| TMHMM | 343 | 365 | 23 | - | – | |
| Phobius | 345 | 365 | 21 | - | – | |
| Phobius | 366 | 376 | 11 | - | – | |
| Phobius | 377 | 396 | 20 | - | – | |
| TMHMM | 377 | 399 | 23 | - | – | |
| Phobius | 397 | 402 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Nitrogen compound transport | The directed movement of nitrogen-containing compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi2g1v0294800.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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