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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0294800 |
| Transcript ID | LotjaGi2g1v0294800.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ureide permease-like protein; TAIR: AT2G03530.1 ureide permease 2; Swiss-Prot: sp|Q9ZQ89|UPS2_ARATH Ureide permease 2; TrEMBL-Plants: tr|G7JY00|G7JY00_MEDTR Ureide permease-like protein; Found in the gene: LotjaGi2g1v0294800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:76938957..76943926) extracted from Lotus japonicus Gifu genome v1.2.
GGGAGGCGCAATTGGATGCATGCTCTTGGCTCTTTTGTTCTTGGGGACATGGCCTGCAGTTTTGACTCTGTTAGAAAGGC GAGGTCGTCTTCCTCAGCATACTTATCTTGATTACTCAATTACCAATCTCTTAGCTGCTGTTCTCATTGCTTTCACCTTT GGTCAGATTGGCACTGATGAGCCTAACTTCTTATCTCAGATTTCTCAGGTAGATATATCATATCCTGTGTTTTCTATCTA AAACTAAGGCACCATCATGAACTTAATTAAGTGAGACTCATTCTTGAATATCTAGAGCCAAGATCCCTCATTTTTCATGA CATTTTTAGTTGCATGAGCGATTTTAGAAACTACTAATTTTTTCTTCCACTTTTAAAACGAACACAAATTAAATAAGAAA ACCTTTTATCCGTACATTTAGTTTTGTGTGTTGAGACGTCACTGCAATTGTTAATGCTTCTTCTACCTTTAAAACAAACA CAATGAAGAAAAATCAGTAATGAAAAGTCATTGTTCGTCTTGGTATGACAAAACACACACCAAAACTTAATAGAGTCTAT CACTTAAACATTTTCTTTTGAATTCCACTTAAAACATATCTAATGCTCTGTTTGGATAGATGGGTGAAAATGAGTGGAAG GAATATAAGAGGAAGGAATATAAAAGAGAGAAATATAAAGGGAAAATGAAGTGATTCTTAAGTTGTTTGGATTGATTGAA AAAGAAGAGAAAATGAAAGGAAAAGTGGTGATAGTATTTATATAATTACTGTTGTACCCATTTGTTTATATAATATATAA TTATATATTAATACCTTTATATGAATTGTACTCATGTGAGGTACTTTTCACGAGTACCAAAGCAATTTGCCTTGGCTTGT TTTCTTGGCTAATCCGGACGGAAAACTATTTTGGTACTGTACACCACTCATTTTCCCACCCATTCATTTTCCAGTCCCAT CCAAACACATAAAAAAGCTATTTTCCACTCATAATCCTTCCTACCAACTTCCTTCCTCTCATATTACACCCAACCAAACA GAGCATAAATGAATTCATTGTGTTGAATTCTTTTTTAGTTTATCCTTTTATTGTATTGAGTTTTTCTATAGTTTGTTTTT ATTTTTGAAACCGAGTTTTGTTATAGTTTTTTTTTTTGACGTTAAATTTTGTTATAGTTAAATGCAAAGACCAATACAAA CATATTAATAGTTGTTTTATACGACTTGAAAATAAATATCCTCGAAAAGCACAACAATGTGACAGCAAAGAAATAATTTT ATAATTTATACGTAAGTCAGCACTCAGCAGTATAACGTATGGGACCATTTTGAAACCGACAACTATTAGTTTAAAATATT CAAAAACAAATAAAATAAATGAATGGTTTTATTTCAAATTTTAAAAATAAAATAAATGAATTGATTTATTTTAAATTTTT AAAAATTCAGAATAAAATAAATGAATCATTTATTTCAAATTTTGAATTGAGAGAAATAAATTAATAGAAAAGAGTTTTCA AGAAGCCATTGAATAAGATGGTGATATTTGTCACAATTTCATCATGTTTGCTTTGGCTTCATCCTTACACTCATGGCAAT AAGTGGCTTAAGTGACTTGTTTGATCACTGTTTTAGTTTTCTTGTATTTAAAAACAGTTTTGGGAAACACTTTTTAAAAT CTGTTTAAAATAAATTGTTCGAATGAGATGTTTTGTAATATTAGTGCATGTTGAGATACACGATAGACTTTCATCTCAAA AATAGAATTGATTTTGTGAGAAGTTACACCTAGTAGTTTTTGAGGGAGTAGAATTGATATACAAATTGTTTGATCATTGC TAGTGTGTGTTTGGGAAACCCAATTGAATCCGTATCTAGGTGTGATCCACATCCAATAGAAGCAACAAATAGTTACTTTT GGAAAGATGAATCCAAGTAGTAGTGCTAATTTAAAATCAAACATGCACTTAATATAAAAATATGAATGTCAAGAAAAATG AAAACAAGAAATGTGTCTTGAATGCCAAGCTGAAGTACATGCATATTTTTGTCACCCTTTTAACTTTATACTATATTGAC TATTACTGTTCAGACTTTTGTATGAATGTGCCAATGGTATTTGATTCAGGATAACTTCCCCTCTGTTCTGTTTGCCATGG CGGGTGGGGTGGTCCTCAGCATCGGAAATCTGTCTACACAATATGCTTGGCCTTTTGTTGGATTATCAGTAGTAACAGTG GTTGCTGCAAGCATAACTGTTGTTATAGGTAACTTACTCTCACAATCACACCCCTCTTAGATTTTGGGTTTATTTTGTAC TTAAATAGTAGTTGTAATTATTTATATAGCTTGCTATATATGTACTCTGGTGCTTAATGTTATAGCAGTGCTCCTTGTGT TCTGATTGTGTAATTAACAGGAACAACCTTGAATTACTTTTTGGATGACAAAATTAATAAAGCTGAGATTCTTTTCCCTG GAGTTGGGTGCTTTTTGATTGCTGTTTGTCTTGGATCTGCTGTTCATTCATCTAACACTGCTGATAATAAGGCCAAGCTT GAAATTTTTTCAAACGAGGCAGCTCAGTAAGTGTTGTATATACTGTTAGAAATAAAGATTTCATGGTTACAAAATGAAAT GTCATGAGTTACTATGCATGATGCATTATGGTGCATTAGTATATATTGTTTAAGGACTATTATATTTTGTTATGAAACCA CTAGGAATTTATCATTAGCTTTATGTCTATTTAGTATTTTAATTGAGTAGTTATACAGTTGTTATGGATTACTCATTATA AATAGAGGATCAACTCATGTAGCATGTGTGTAAAAAATAATAGAATTATCTCATTTTTATTTTTCCATATTTTATTTTCC GACATATACTTTGTCTTACTTCTGCTTAGTCTAAAACCCTTAGATTCTAAAGTCTTACTCGAAATCTTAAGTTTATATTT ACTCAGTTCACTTTCAAAAAATATTTACTCAGTTCCCTTGATTCTTCAATTGGAACTATATCATCCACAAATTAAACAAC ATGCAGTTTGGAATGCTCTTTCTGTATATCTTAGTAAGCATATCCAGAACCAGACTGACAATTGATGTAAAACTACAAAT ATGTTCACTGTGTGGAGATGACTTTCTATTGCTATACTTGTTTCTGCACTACTACAGTACTACTGAGAAGAAAAATGTTT TCCCTTATTTTAGGGGAAGAAGCATTAATTTGAGATGGTTTTGAACATTGGGAGGGATGGTTATCATAGTTTCTAGATAA GTGCTGTTTTTGTTTTGGACTATGACTTTAGTGTGTTTTCTTTGATAATCTAAAGCATAATTTACAACCAATGCTGTCTT TTGCCAGGGGAAATTGTTTATCCACATTGAAAGGAACAAGTGAAGGTAACAATATTCGATTACCTGTTTTTGTGGGATTA TTTCACTTGCTAAATGCTGATCTTTTTACTCTCCTCTGTGGCATAGTTGATTCAAAAGATCCAGAGAAAGGAAATGATTC TGCATACAAGGCCAAAGCAGGAACTGCAGTTTTTCTTATAGAGCTTGAGAAAAGAAGATCCATTAAGGTAGGTGGTTATG CTTTATGGAACTATGACTCCAGTATTCACAAACATTTTCTCCTTATTGTGTAGCATTTATATAAGGATAAATTGGGCCGA TTTCCCCTGAGATTTAACGAGACACTAACCACCTTTACACTCTTCTTCTAAGATTTATCATTATTTCATTCATATATCCT CTAAGGTTTATCAATATAGCACTGAATATCCCTCTATTATTCGAAATTGTTATTAAGGAGGGGAAGTTTATGCATTTTGC AAAATAGATGCAAGGTTAGTGCAATAATAAAAACCTTATGAAGGTCAGTGCAAATGTGTAATTTCCTCTTTAAATAATTA AGAATGATAAATATGATAGTACTCTTGTATTAAATCTTTTGCAGGTATTTGGGAAGGGTACTTTGGTGGGATTGGCTATA ACTTTCTTTTCTGGAATTTGCTTCTCCTTATTCTCACCAGCATTCAATTTGGCAACAAATGACCAGTGGCACACTTTAAA GAAAGGGGTTCCCCATTTGAGTGTTTACACTGCCTTCTTTTACTTTTCGGTCTCTTGTTTTGTTGTTGCCATCATTCTAA ACATCACCTTCCTCTACCAACCTCTCTTTAACTTACCTAAGTCATCACTGAAGGCTTATTTGAGAGACTGGAATGGCAGA GGTTGGGCTCTTTTGGCTGGTCTCCTTTGTGGGTTTGGAAATGGCCTTCAATTTATGGGAGGTCAAGCTGCAGGATATGC AGCAGCAGATGCTGTTCAAGTGAGTTTTTACTTCACTTTTTTTTCATGCCTAGAAAGAACTTTACCTAGAAATTCTTTGA TATACCAATTTAAAACTATTCCAAACACGCATTATTATAATTAATTCTAAAGTCAAAATCAATTACTATAAGAGAAAACT TACGCTAGTAGTTTCTAGGTACCAAAATTGATTATGAGGAAACATAAGCTGATCCAAAATGCTAATAGTATTTGAAGTGT GTTTGTTGCTTAAATCATCAATTCTCAGATCTCAGTAACTGAAGGAGTGTTGTTTGTACAGGCACTACCACTTGTGACGA CATTTTGGGGTGTTGTTTTGTTTGGAGAGTACCGCAAATCATCAAGGAAGACATACATACTGCTTGGTAGCATGTTGCTT ATGTTTATTGCAGCTGTTGCTGTACTCATAGCATCATCAGGGCATCGAAAATGATCACTTAGGTGGAGAGAAAATGTTCA CAAAGATTAAAAGGTACTGAAGGTGAAAGGAAAAACGCATATGATCATTGTTAGAGATGTAAAATATGCGCAAACATGTA AGTTTCAATCGCAGAAGATTGTACACTGAAAAAGAAACAAAAATGCAGCAACATTCACTTTTACAAATTGTCAAATTGTC TCAACTGCAG
CDS sequence (LotjaGi2g1v0294800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTCTTGGCTCTTTTGTTCTTGGGGACATGGCCTGCAGTTTTGACTCTGTTAGAAAGGCGAGGTCGTCTTCCTCAGCA TACTTATCTTGATTACTCAATTACCAATCTCTTAGCTGCTGTTCTCATTGCTTTCACCTTTGGTCAGATTGGCACTGATG AGCCTAACTTCTTATCTCAGATTTCTCAGGATAACTTCCCCTCTGTTCTGTTTGCCATGGCGGGTGGGGTGGTCCTCAGC ATCGGAAATCTGTCTACACAATATGCTTGGCCTTTTGTTGGATTATCAGTAGTAACAGTGGTTGCTGCAAGCATAACTGT TGTTATAGGAACAACCTTGAATTACTTTTTGGATGACAAAATTAATAAAGCTGAGATTCTTTTCCCTGGAGTTGGGTGCT TTTTGATTGCTGTTTGTCTTGGATCTGCTGTTCATTCATCTAACACTGCTGATAATAAGGCCAAGCTTGAAATTTTTTCA AACGAGGCAGCTCAGGGAAATTGTTTATCCACATTGAAAGGAACAAGTGAAGTTGATTCAAAAGATCCAGAGAAAGGAAA TGATTCTGCATACAAGGCCAAAGCAGGAACTGCAGTTTTTCTTATAGAGCTTGAGAAAAGAAGATCCATTAAGGTATTTG GGAAGGGTACTTTGGTGGGATTGGCTATAACTTTCTTTTCTGGAATTTGCTTCTCCTTATTCTCACCAGCATTCAATTTG GCAACAAATGACCAGTGGCACACTTTAAAGAAAGGGGTTCCCCATTTGAGTGTTTACACTGCCTTCTTTTACTTTTCGGT CTCTTGTTTTGTTGTTGCCATCATTCTAAACATCACCTTCCTCTACCAACCTCTCTTTAACTTACCTAAGTCATCACTGA AGGCTTATTTGAGAGACTGGAATGGCAGAGGTTGGGCTCTTTTGGCTGGTCTCCTTTGTGGGTTTGGAAATGGCCTTCAA TTTATGGGAGGTCAAGCTGCAGGATATGCAGCAGCAGATGCTGTTCAAGCACTACCACTTGTGACGACATTTTGGGGTGT TGTTTTGTTTGGAGAGTACCGCAAATCATCAAGGAAGACATACATACTGCTTGGTAGCATGTTGCTTATGTTTATTGCAG CTGTTGCTGTACTCATAGCATCATCAGGGCATCGAAAATGA
Protein sequence (LotjaGi2g1v0294800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLLALLFLGTWPAVLTLLERRGRLPQHTYLDYSITNLLAAVLIAFTFGQIGTDEPNFLSQISQDNFPSVLFAMAGGVVLS IGNLSTQYAWPFVGLSVVTVVAASITVVIGTTLNYFLDDKINKAEILFPGVGCFLIAVCLGSAVHSSNTADNKAKLEIFS NEAAQGNCLSTLKGTSEVDSKDPEKGNDSAYKAKAGTAVFLIELEKRRSIKVFGKGTLVGLAITFFSGICFSLFSPAFNL ATNDQWHTLKKGVPHLSVYTAFFYFSVSCFVVAIILNITFLYQPLFNLPKSSLKAYLRDWNGRGWALLAGLLCGFGNGLQ FMGGQAAGYAAADAVQALPLVTTFWGVVLFGEYRKSSRKTYILLGSMLLMFIAAVAVLIASSGHRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 386 | 386 | 1.7E-219 | ||
| SignalP_EUK | 1 | 16 | 16 | - | – | |
| Phobius | 1 | 16 | 16 | - | – | |
| Phobius | 1 | 1 | 1 | - | – | |
| PANTHER | 1 | 386 | 386 | 1.7E-219 | – | |
| Phobius | 2 | 11 | 10 | - | – | |
| Phobius | 12 | 16 | 5 | - | – | |
| Phobius | 17 | 31 | 15 | - | – | |
| Pfam | 28 | 381 | 354 | 2.3E-192 | ||
| TMHMM | 29 | 51 | 23 | - | – | |
| Phobius | 32 | 52 | 21 | - | – | |
| Phobius | 53 | 63 | 11 | - | – | |
| Phobius | 64 | 82 | 19 | - | – | |
| TMHMM | 66 | 85 | 20 | - | – | |
| Phobius | 83 | 87 | 5 | - | – | |
| Phobius | 88 | 117 | 30 | - | – | |
| TMHMM | 92 | 114 | 23 | - | – | |
| Phobius | 118 | 215 | 98 | - | – | |
| TMHMM | 124 | 146 | 23 | - | – | |
| TMHMM | 216 | 238 | 23 | - | – | |
| Phobius | 216 | 238 | 23 | - | – | |
| Phobius | 239 | 257 | 19 | - | – | |
| Phobius | 258 | 283 | 26 | - | – | |
| TMHMM | 258 | 280 | 23 | - | – | |
| Phobius | 284 | 303 | 20 | - | – | |
| TMHMM | 301 | 323 | 23 | - | – | |
| Phobius | 304 | 323 | 20 | - | – | |
| Phobius | 324 | 328 | 5 | - | – | |
| TMHMM | 327 | 349 | 23 | - | – | |
| Phobius | 329 | 349 | 21 | - | – | |
| Phobius | 350 | 360 | 11 | - | – | |
| Phobius | 361 | 380 | 20 | - | – | |
| TMHMM | 361 | 383 | 23 | - | – | |
| Phobius | 381 | 386 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Nitrogen compound transport | The directed movement of nitrogen-containing compounds into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi2g1v0294800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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