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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0295600 |
| Transcript ID | LotjaGi2g1v0295600.2 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3 protein, putative; TAIR: AT1G26480.1 general regulatory factor 12; Swiss-Prot: sp|Q9C5W6|14312_ARATH 14-3-3-like protein GF14 iota; TrEMBL-Plants: tr|E9KNA7|E9KNA7_SOYBN SGF14e; Found in the gene: LotjaGi2g1v0295600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77040237..77042575) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGCGGAGAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCTGAACAGGCCGAGAGATATGAAGGTTCTTC CCTATTTTTCTTTCTTTTTCTTTTCATTGTTGTTGTTTCCTTCATGGGATTTACGTTTTTTTTATTCTGACATTGGTCTG GACTGGATCTGTTTTTATCAAGAGGTTTGTTCTTGTTTTTATGAAGGAAAACTTAAATCTTGATGGGGATGGAAAATATT TCATTATGAGATTTGTGTCTCTAATGTTGCTTATGGATCATGGATCAGTTTATAGTTTAGATGATTTTCCCTTCAATAAC CCTAAAAAAGGGTCTTTCATGTAATGGTTTGATTTGAAATTTATTTATTTCCAATTAGAATTATATTAAACTTGTAATTG TTTTTATTTTGCATCATAGTATTGGATGCTGGCATGTTATTTGTTTCATTTGATGTATAGATAGAATACATGATGAGGGT GATGATGTTATTTTAAATAATTTGTTTCTCAGTTTGTTATTTTTTGACTTCTCCTTCTGATTGATTTTGGCTTTAGAATC AAGTTGAAGGATTTACAAAGAGGCTCATGTTCATTTATTTATTTGACCTTTTGAGTGTTATGAATTTGCCTGATTAAGTG AACATTTATTTTTGTTAAAGTTTTATTTGGTTAATATTTGTCTGATTTTGCGCGGGTAATGGAAGTCCGCTTTACACTCA GAAGCTGCATTATGTTAGCTTAGGCATTGTTGCATTATGCATACCATAGTGTATAGCTGCCAGCTATCACATGTTGGAAA CTGTTTACAAATTCCAAACAGTTTTTTCGATTTGATATGATGATTGCCCTCTGTAACTTCTTATTTGTTGTTCAGAAATG GTAGAATGTATGAAGAATGTTGCAAAACTTGATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATATAA AAATGTCATTGGTGCAAGGAGAGCCTCTTGGCGCATTATGTCCTCAATCGAGCAGAAGGAAGAGACTAAGGGAAATGAGC ACAATGTTAAGCAGATCAAGAATTACCGCCAAAAGGTTGAGGAGGAACTCTCCAAAATTTGTGGTGACATCCTGACTATT ATAGACCAGCATCTAATTCCTTCTTCCGCCTCAGCAGAAGCTAGTGTTTTCTACTATAAGATGTGAGTCACGTTGTTGCG CTGGTTCTGTATTACTTACTTGATTAATTTGATTCTTTATGGAATATTTTCTTTCTTTTAAGCTGATGCAATAGTTTTTG TTTATTATGATTTAAATGATACCATGACGGACCTGAGATTCAAAGAATGTGTATGAATGTGATGATTTTGATTACTGTTT TTTTGTGTATTGCATACTGTTTGTCCACTTGATTGCCTTTTAAATGATATTTTCTTTGCTCTAAGGGGAGTCCAATGTTG TGTGCTGATTTATATTCTGCTCATCATTATGCATATAACATTTCTTATTGCTTGCCACATACTTTGCTTATATATCCCTG ATTTCCTTATCCTTTTGATGCAGGAAAGGTGATTATTATCGGTATCTTGCTGAGTTCAAGACCGACCAAGAAAGGAAAGA GGCAGCCGAGCAGTCACTCAAGGGATATGAGGTTTGTGTTTGTGTTTGATCTCTTGTATTTCTGCATCGAAGTGATTCAT AAATAAAATGCAGTGTCCTTGACTTTTCAAAAATATTTTGATTATTAGGCTGCTTCAGCCACTGCCAACACCGATCTTCC ATCAACACATCCAATCCGTCTTGGACTTGCTCTCAACTTCTCTGTCTTTTATTACGAGATCATGAACTCTCCTGAAAGGT TAGTTATTATTTCTCTCATATACTTCATGGGTCCATTGAATTGCTTGTGTTGTAGCTCTTGTCTCAATGTCATTACTGAA TCTTGCAGGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGACACCTTGAGTGAAGAGTCATA CAAGGACAGTACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACATCCGATTTGCCAGAAGATGGAGGTA GGGGAACGGTTAAAACTTGATCTTCTAAGATGCATTTGAGTTTTACCTGAGTATATATCACACCATATTTACTTAATAGT GGTATCCAGCGAGTTTTTAGTATAGGACTAAATGATAACTACCTGACAGTTTCCTGCTTTTTCTTTTTAACTTAAAAAAT TAAAATGGGAAAATATAATCATAGATGCTAGGTGTTTGTATTTCGATGATACTCCTTCAGCACTGAATTGTGTGCTGGGA AGCACATAAGTTGATGTGA
CDS sequence (LotjaGi2g1v0295600.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGCGGAGAAAGAGAGAGAGACCCAGGTTTACTTGGCCAAGCTTGCTGAACAGGCCGAGAGATATGAAGAAATGGT AGAATGTATGAAGAATGTTGCAAAACTTGATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATATAAAA ATGTCATTGGTGCAAGGAGAGCCTCTTGGCGCATTATGTCCTCAATCGAGCAGAAGGAAGAGACTAAGGGAAATGAGCAC AATGTTAAGCAGATCAAGAATTACCGCCAAAAGGTTGAGGAGGAACTCTCCAAAATTTGTGGTGACATCCTGACTATTAT AGACCAGCATCTAATTCCTTCTTCCGCCTCAGCAGAAGCTAGTGTTTTCTACTATAAGATGAAAGGTGATTATTATCGGT ATCTTGCTGAGTTCAAGACCGACCAAGAAAGGAAAGAGGCAGCCGAGCAGTCACTCAAGGGATATGAGGCTGCTTCAGCC ACTGCCAACACCGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCTCTCAACTTCTCTGTCTTTTATTACGAGAT CATGAACTCTCCTGAAAGGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGACACCTTGAGTG AAGAGTCATACAAGGACAGTACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACATCCGATTTGCCAGAA GATGGAGGTAGGGGAACGCACTGA
Protein sequence (LotjaGi2g1v0295600.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAAEKERETQVYLAKLAEQAERYEEMVECMKNVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEETKGNEH NVKQIKNYRQKVEEELSKICGDILTIIDQHLIPSSASAEASVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAASA TANTDLPSTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPE DGGRGTH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 246 | 246 | 1.0E-120 | ||
| Gene3D | 1 | 243 | 243 | 4.1E-124 | ||
| PANTHER | 3 | 244 | 242 | 3.4E-160 | – | |
| PANTHER | 3 | 244 | 242 | 3.4E-160 | ||
| SUPERFAMILY | 6 | 237 | 232 | 6.15E-104 | ||
| SMART | 7 | 245 | 239 | 8.6E-173 | ||
| Coils | 13 | 33 | 21 | - | – | |
| Pfam | 13 | 235 | 223 | 2.5E-105 | ||
| PRINTS | 39 | 68 | 30 | 8.4E-83 | ||
| ProSitePatterns | 45 | 55 | 11 | - | ||
| PRINTS | 88 | 112 | 25 | 8.4E-83 | ||
| PRINTS | 119 | 141 | 23 | 8.4E-83 | ||
| PRINTS | 154 | 180 | 27 | 8.4E-83 | ||
| PRINTS | 181 | 207 | 27 | 8.4E-83 | ||
| Coils | 195 | 215 | 21 | - | – | |
| PRINTS | 208 | 237 | 30 | 8.4E-83 | ||
| ProSitePatterns | 217 | 236 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0295600.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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