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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0295600 |
| Transcript ID | LotjaGi2g1v0295600.6 |
| Related isoforms 5 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 14-3-3 protein, putative; TAIR: AT1G26480.1 general regulatory factor 12; Swiss-Prot: sp|Q9C5W6|14312_ARATH 14-3-3-like protein GF14 iota; TrEMBL-Plants: tr|E9KNA7|E9KNA7_SOYBN SGF14e; Found in the gene: LotjaGi2g1v0295600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:77040476..77041698) extracted from Lotus japonicus Gifu genome v1.2.
ATGGTAGAATGTATGAAGAATGTTGCAAAACTTGATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATA TAAAAATGTCATTGGTGCAAGGAGAGCCTCTTGGCGCATTATGTCCTCAATCGAGCAGAAGGAAGAGACTAAGGGAAATG AGCACAATGTTAAGCAGATCAAGAATTACCGCCAAAAGGTTGAGGAGGAACTCTCCAAAATTTGTGGTGACATCCTGACT ATTATAGACCAGCATCTAATTCCTTCTTCCGCCTCAGCAGAAGCTAGTGTTTTCTACTATAAGATGTGAGTCACGTTGTT GCGCTGGTTCTGTATTACTTACTTGATTAATTTGATTCTTTATGGAATATTTTCTTTCTTTTAAGCTGATGCAATAGTTT TTGTTTATTATGATTTAAATGATACCATGACGGACCTGAGATTCAAAGAATGTGTATGAATGTGATGATTTTGATTACTG TTTTTTTGTGTATTGCATACTGTTTGTCCACTTGATTGCCTTTTAAATGATATTTTCTTTGCTCTAAGGGGAGTCCAATG TTGTGTGCTGATTTATATTCTGCTCATCATTATGCATATAACATTTCTTATTGCTTGCCACATACTTTGCTTATATATCC CTGATTTCCTTATCCTTTTGATGCAGGAAAGGTGATTATTATCGGTATCTTGCTGAGTTCAAGACCGACCAAGAAAGGAA AGAGGCAGCCGAGCAGTCACTCAAGGGATATGAGGTTTGTGTTTGTGTTTGATCTCTTGTATTTCTGCATCGAAGTGATT CATAAATAAAATGCAGTGTCCTTGACTTTTCAAAAATATTTTGATTATTAGGCTGCTTCAGCCACTGCCAACACCGATCT TCCATCAACACATCCAATCCGTCTTGGACTTGCTCTCAACTTCTCTGTCTTTTATTACGAGATCATGAACTCTCCTGAAA GGTTAGTTATTATTTCTCTCATATACTTCATGGGTCCATTGAATTGCTTGTGTTGTAGCTCTTGTCTCAATGTCATTACT GAATCTTGCAGGGCCTGCCATTTGGCTAAACAAGCTTTTGATGAGGCAATTGCAGAGTTGGACACCTTGAGTGAAGAGTC ATACAAGGACAGTACTTTGATCATGCAGTTGTTGAGAGACAACCTGACTCTCTGGACATCCGATTTGCCAGAAGATGGAG GTAGGGGAACGGTTAAAACTTGA
CDS sequence (LotjaGi2g1v0295600.6) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTAGAATGTATGAAGAATGTTGCAAAACTTGATCTTGAGCTTACTGTGGAAGAGAGGAACCTCCTCTCAGTGGGATA TAAAAATGTCATTGGTGCAAGGAGAGCCTCTTGGCGCATTATGTCCTCAATCGAGCAGAAGGAAGAGACTAAGGGAAATG AGCACAATGTTAAGCAGATCAAGAATTACCGCCAAAAGGTTGAGGAGGAACTCTCCAAAATTTGTGGTGACATCCTGACT ATTATAGACCAGCATCTAATTCCTTCTTCCGCCTCAGCAGAAGCTAGTGTTTTCTACTATAAGATGAAAGGTGATTATTA TCGGTATCTTGCTGAGTTCAAGACCGACCAAGAAAGGAAAGAGGCAGCCGAGCAGTCACTCAAGGGATATGAGGCTGCTT CAGCCACTGCCAACACCGATCTTCCATCAACACATCCAATCCGTCTTGGACTTGCTCTCAACTTCTCTGTCTTTTATTAC GAGATCATGAACTCTCCTGAAAGCTCTTGTCTCAATGTCATTACTGAATCTTGCAGGGCCTGCCATTTGGCTAAACAAGC TTTTGATGAGGCAATTGCAGAGTTGGACACCTTGAGTGAAGAGTCATACAAGGACAGTACTTTGATCATGCAGTTGTTGA GAGACAACCTGACTCTCTGGACATCCGATTTGCCAGAAGATGGAGGTAGGGGAACGGTTAAAACTTGA
Protein sequence (LotjaGi2g1v0295600.6) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVECMKNVAKLDLELTVEERNLLSVGYKNVIGARRASWRIMSSIEQKEETKGNEHNVKQIKNYRQKVEEELSKICGDILT IIDQHLIPSSASAEASVFYYKMKGDYYRYLAEFKTDQERKEAAEQSLKGYEAASATANTDLPSTHPIRLGLALNFSVFYY EIMNSPESSCLNVITESCRACHLAKQAFDEAIAELDTLSEESYKDSTLIMQLLRDNLTLWTSDLPEDGGRGTVKT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 232 | 232 | 6.8E-107 | ||
| PANTHER | 1 | 231 | 231 | 3.1E-142 | – | |
| PANTHER | 1 | 231 | 231 | 3.1E-142 | ||
| PIRSF | 1 | 232 | 232 | 1.8E-103 | ||
| SMART | 1 | 234 | 234 | 6.3E-145 | ||
| Pfam | 1 | 221 | 221 | 1.3E-92 | ||
| SUPERFAMILY | 2 | 228 | 227 | 2.88E-91 | ||
| PRINTS | 14 | 43 | 30 | 2.2E-57 | ||
| ProSitePatterns | 20 | 30 | 11 | - | ||
| PRINTS | 63 | 87 | 25 | 2.2E-57 | ||
| PRINTS | 94 | 116 | 23 | 2.2E-57 | ||
| PRINTS | 129 | 155 | 27 | 2.2E-57 | ||
| PRINTS | 156 | 182 | 27 | 2.2E-57 | ||
| Coils | 181 | 201 | 21 | - | – | |
| ProSitePatterns | 203 | 222 | 20 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0295600.6, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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