Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0316800 |
| Transcript ID | LotjaGi2g1v0316800.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Trichome birefringence-like protein; TAIR: AT1G70230.1 TRICHOME BIREFRINGENCE-LIKE 27; Swiss-Prot: sp|O04523|TBL27_ARATH Protein ALTERED XYLOGLUCAN 4; TrEMBL-Plants: tr|A0A1J7I6W8|A0A1J7I6W8_LUPAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0316800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:79207457..79212802) extracted from Lotus japonicus Gifu genome v1.2.
TACTTTTTAAACGTACACAAATGAAGTGTGCACACATCGCGTTGAAGAGCATTGTGCTATATAATAGTCCTCAAATATCT AACAAAAAAATGTTATATAACATAATAAAAACTAGATGAACATCATTCTTCTGAACACCTAGCAATACTTGCAATTTTGT GGAGGTTTATCACTGCACAAATTGAAGAGTCATCCAAAACTAACACAAATTACTCGTGTTTATGGATGTCTGCTAAGGTG TTCACAGATCACAACAATTAATATAATGTTAGAATTCGATGCGGGTGATCTTTTTCTGAACTTTTCAAGTTTGCAGGTAT TTTATTGGCAGAAAAGCATAAAGCTCCTCTTCTTGCCCTTTCTCCTAATTCAGGTATATAAGCATGCAAAGTTTTGTCTT GTTAATAATATCATATAGAATGTTAGAATTGCAAGTCTTTTCTTTTCTTCTCCAATAACAACATGATATTTTATTGATAG AAAAGGACAAAGGTTACAAGAAAGAATGTGACTACTTTAAAGGCAAATGGGTTCCTGATAGGAGAGGCCCTTTGTACAAC GGTACAACATGTGGCGATACGATCCAAAATACCCATAATTGCATGACCAATGGCAGGCCTGACATGGGGTATCTTTATTG GAGATGGAAACCTAGGAGGTGCAATCTTCCAAGGTTTGATCCTATCAATTTTCTCCAAGTCGTTAAAAACAGGCACATAT CTTTTGTTGGGGATTCTCTAGCTAGGAACCAATTAGAGTCTCTTATTTGCATGTTATCCTCTGTTTCAACACCCAAACTT GACCTCTATAAAGGTATTGGTTGGTGGCACTTTCCTTCTCACAATGTAACCTTGTCATCATATTGGGCACCATTTCTTGT GCAAGGGGTTCAAAGACAATTAACCGGTCCCGGACCACATCATAATACAATGTATTTGGATCAAGTTAATGAAAAATGGG CTTTGGATATGGATAAAATGGATTTAATTGTGCTTGGATTTGGGCATTGGTTTGCTGGCATTCCTTCACTTTACTATGAG GGTGATTCAGTTTTGGGTTGCCAAAATTTTCCTAATCTTAATTGCACCGATATTGGGTTTTATGTCCCGATAAGAAAGGC TTTGAGGACTGCTCTTAATAGCATAATTGAGAGGAAAGCAGCTAAAGGAAATGGAGTTGGTGTCATTGTGAGAACATTCG CACCTGTTCATTTTGAAGGTGCTTGGGATAAAGGTGGCACTTGTTCAAAGAATACACCTTATAAAAAAGGGGAGAAGAAA CTCGAAGAAAAGGATGTTGAGATTAGAAAGATTGGAATGGAAGAATTACAAAATGCAAAGGAAAAAGCCAAACAATTTGG AGGGTTTAGGTTTGAAGTACTAGATGTAACCGTATTAGCATCAATGAGACCAGATGGCCATCCCGGTGCTTATAGAAAGC CATTCCCATTTGCTAAAGGGGTTGAAAAGAATGTGCAGAACGATTGTACTCATTGGTGTTTGCCAGGGCCTATAGACACT TGGAATGAAATCTTTATTGAGATGATAAAGAACTGGGAGGAACAACTAAGAAGTGAAGAGTGAGATATTTCTCTTACATA TCTTGTTAATAGAAAATTCTTGTTCTCACAATTGTTGCTCTTTCTTTTTTTTTTTATTTTAAAGTAAACTGAATTTCCAT TAAAAGCCATTCGGCAAACAAGACATAACATCTGAAACAACATAAGCTAAAGCAGCATCCGGAACCTCCTCCACCCAAAC TAAATCAGTATAGGTTTCAGCGGTCCGGGCTAGGAAATCCGCAACAGTATTACCCGTGCGTCTAACAAAAGAGAAAGAAA CAACATCAAAAGCACATAAAAGTGTGTGACACTCGCTAATAATAGAACTCAAATGGGAACGCCCAACCTCCTTGGCTTTC CAATAATTATATAGCTGTAAACAGTCTGTCTCCAAACAAATCCTCCGGAAGCCAAGATCAATAGCTAGCTGCATGGTCCA CCTCAAGCTCAGTGCTTCCGCCAAAAGAGGTGAGATAGCGGATTTGGGATAGGAGCATGCCGCCGCCATCACCTCCCCCC TACAGTTCCGTGCCACCATGCCCAACCCACTCAAGCCATTTCCGTGATAGGAAGCATCAAAATTGCACTTAATGATACCT GAAGCTGGCGGCTTCCACCTCGCGGGCAAGGCCACCGCCGGCGCTCTCATCTGGTCACGCACTTGGACCTCCTCCATCAA GCAGCTGACCCGCCTAAGCACGGTGTCCACCTTGATCTGCTGCTGCTGGAAATTGCTACGGTTCCTGGCCTCCCATATGG CGTAAGTCGTGGTCTGAACAAGAGCCATCACCCCGTCATCATGCAGCTCCACCACCGCTAACCAGAAATCTCGAAAAGTG GAGAAGGACGCCACTCGAAGTGCTAGCTGAGAAGCAAACCACACATGCTGCGCCGCTGGACAGTGGATGAATAAATGGTC CTCAGTCTCCCTTGCCGTTGCACAAAATGAGCACCCGGGGTCTACATCCACCTGCCGACTAAATAGCCTCTCCTTCAATG GCAAATAACCTTGTATAGCCCTCCAACATGTCTCCTTGCATCGTGGTAAAGCTCGTGAGGCCCAGAAAAAATTCCAGAAT CTGGGCTCAAGCATCACAGCCATGGATGATGATGTTTCAGCAAGCGATATCAGCTGGCTCATGAACTTGTACCCCTCCTT ACACGTGTAATGGCCATTGGTTGTGGTTGGCCAATGAAATTCATCCGGGCTACCTGGCACACCCAGCGGGATCGATAAAA TGCTAGCTGCAGTGCTTGGATTAAAGACAAGCTGAATCAAGTCTGTCCTCCACCTGTGCAAATCATGATCAATAAGCATA GAAACATGTGTTAGTTGAAATTCATCAACAAGGTCTTGGCGGTAGATGAGGGGGGCACCCCCTGGCACCCAATTTTCATT CCAAATATGAACCTGTGAACCATCACCAATTTTCCAAAGCCCTCCGCGCTCAAAAATCCAACTTGTTTTTAAGATACTGG TCCAGGCATAGCTTGGACGGTACCCCTTTTTTGCCTCCCGTAATGAAGTTCTATGGAAATAGACCCCGTTAAAGACTCGA GCAACCAAACTTTCCGGGCGAGTGTATAAGCGCCACCAGTTCTTCCCAACTAGAGCCATGTTAAAAGATTTAAAATCACG GAACCCAAGGCCCCCTTCCACTTTGTTCTTACATAAGTTCTTCCACTTTGTCCAATGTAGACCACGGCGGTTTGGGTCCC CACCCCAATAGAATCTCGCAATCATGCTATCAATATCGGTGCCCACTAGGGTGGACAAGTATCAAAATGGTCCATCAATA GACCACTCATCACAACCGTTGATATATAATATTTTAAGGTAGTGGTCTAGATTTTTCACCTTGCACTTGCGAAACAGGTG AAATTGGTGGCCCTAACAGATTTGTAAAATTTGCTAAGGCACCCCTCTCTCTCATGTGACTCCGCTTGTACTGTGACTTT CACTCGTCGCGCTCTCGCCGCCCCGAAGTCGCGGTGACCACGCCGCACCCCTCTGATAACGCAACCATCTTGATATTCTC CTTCTGGTTGTCTTCTTTCTCCGCCATCACTGCTGACCCCTCCTGACACTCGTTGAGGAGCTCCAACTTGGCAGCCCGGT CTGGGAGAAGCGGGTTCTTCTTTCTGGTTACCGCGCCGCCCTGAAGCGCCACGACGATGGGGTGCTTGAAATCGACAACT TCAATGGCTATGAAGGTATTGTATGGAGAATCCCGGCTCTGTTCATACTAAAATTGCTGGTTTTGTCAATTTACCTTAGG TTTGTAAGACTATGAAGCCTCAATTACTATTGTGTCAATTTGCTTCTAGCTCAGTATAAAGGTTGAATACTAAGGTCCCA TTTCCCCATCTTGCTTCTGTTTCCTTCTTTGTCACCTCTTGGAGCCGGATCCATGTTCAGGATCAAGGTGAAAGGAAGGA ATTGGAGAAAATTGCCCTGTTAAGATTGTTGGAAATTAGAGAAATACAATTACTATTGTTGAATATTAATTGCTACTACT CTTCCTAGAAGGTGTTGTGTTCATTTGTTACAACATGAGTTGCAGGTTTTGTCTGCAAAACAGAACTGTTTCTGGTGTGT GGTTTGGCACGCGGTGATTTGATCTTTGTGACTTGGAAGAAATGATTTGTTATTTAGGGGTGTGGCTTTGGAGCTGGACA GAGTTATGGAATTAATTCATATCAGAACTTGGAATTGACTAACAATGAAAATTAAATCGTTTCATCATTCTTTTTTCGAG TGGTGCACTAGCCCGACGTTGTGCTTAAAAGATGTGTGAGTGTGAGGATCGAGTAGTTGTTGGTGTGTGGGCTGCAGATT GCGTTTGACAGTGGATGATTTGGACAGTTGGTAGTTTTGGCATGGATTGTGTTTTGTCTTTGCTGAAGGTTGCTGTGCAG TAGCTTGTCTGGTTGCAGGTTCATGTTTTCTATTTGGTTGGCCAAGTGGTGCAGGTGTTTTTGCTGGTGGTGGTTTTTGG ATTCTTGTAATTTGCTGGCGATGGTTTATTTGGTGGGAACTAGGGTGTTGTTGGGGTTCTTTAGTTTCGGTAGTTGCTGC TGTTTTCTTGCTGTTTTTTATTTATTTTTTGCTTGTTATCTTCTCTTTTGGTAGTGTTTTGCTTTCTTGTATTGGCATTC CTTTTTCATGTATTCAGGTTCTAGCACCCCCTGTGCTAGCTTTGAATGCAATTGGCTTATCTAAAAAACTATTGTTGAAT ATTGTTAATCATGAAGAACTGCTTTGCTGACCTTAAAATATTTTCCTGCTATATTACTTGGTATTGGAGATAGCTGACGT TTCACATAAGATGTTTGCTGTCTTCTACTTCCCATGAGCTATTCAAATGCTTGCTGTCTTATGTTTCGTGTGACCAAACT TCAGGGAGAGATAGGATTACGAAATACACAAGACAAATACCCAGAGACTTATACGCCTGTATCATCCAGACAAGTATCAT GGAACATGAAGATGTATTGCAGCTGCTTTAGGAGAGAATCAAAGCTGTCTGTAGTTGTTTTGGATCCACCAAGTGTGTAC TGGAGGTGTAGGTCCCAACAGAGTTGAAGTTTCAGGACAGAACTTGCAAAGCTAATGCACGAAGATTATGTAGAATAGGA ATTATGTATTTATTGATTACACACTATTGAACTTCAATTTTGTACAATGTTGTAACAATAGTTCTGATTGCAATAAAATG AGACTTTTAAGTTTAATTCTTTGTTTACTTTCTTTTTGTGAATAAAATGAGGTTTTTGTACTCAAA
CDS sequence (LotjaGi2g1v0316800.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACCAATGGCAGGCCTGACATGGGGTATCTTTATTGGAGATGGAAACCTAGGAGGTGCAATCTTCCAAGGTTTGATCC TATCAATTTTCTCCAAGTCGTTAAAAACAGGCACATATCTTTTGTTGGGGATTCTCTAGCTAGGAACCAATTAGAGTCTC TTATTTGCATGTTATCCTCTGTTTCAACACCCAAACTTGACCTCTATAAAGGTATTGGTTGGTGGCACTTTCCTTCTCAC AATGTAACCTTGTCATCATATTGGGCACCATTTCTTGTGCAAGGGGTTCAAAGACAATTAACCGGTCCCGGACCACATCA TAATACAATGTATTTGGATCAAGTTAATGAAAAATGGGCTTTGGATATGGATAAAATGGATTTAATTGTGCTTGGATTTG GGCATTGGTTTGCTGGCATTCCTTCACTTTACTATGAGGGTGATTCAGTTTTGGGTTGCCAAAATTTTCCTAATCTTAAT TGCACCGATATTGGGTTTTATGTCCCGATAAGAAAGGCTTTGAGGACTGCTCTTAATAGCATAATTGAGAGGAAAGCAGC TAAAGGAAATGGAGTTGGTGTCATTGTGAGAACATTCGCACCTGTTCATTTTGAAGGTGCTTGGGATAAAGGTGGCACTT GTTCAAAGAATACACCTTATAAAAAAGGGGAGAAGAAACTCGAAGAAAAGGATGTTGAGATTAGAAAGATTGGAATGGAA GAATTACAAAATGCAAAGGAAAAAGCCAAACAATTTGGAGGGTTTAGGTTTGAAGTACTAGATGTAACCGTATTAGCATC AATGAGACCAGATGGCCATCCCGGTGCTTATAGAAAGCCATTCCCATTTGCTAAAGGGGTTGAAAAGAATGTGCAGAACG ATTGTACTCATTGGTGTTTGCCAGGGCCTATAGACACTTGGAATGAAATCTTTATTGAGATGATAAAGAACTGGGAGGAA CAACTAAGAAGTGAAGAGTGA
Protein sequence (LotjaGi2g1v0316800.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTNGRPDMGYLYWRWKPRRCNLPRFDPINFLQVVKNRHISFVGDSLARNQLESLICMLSSVSTPKLDLYKGIGWWHFPSH NVTLSSYWAPFLVQGVQRQLTGPGPHHNTMYLDQVNEKWALDMDKMDLIVLGFGHWFAGIPSLYYEGDSVLGCQNFPNLN CTDIGFYVPIRKALRTALNSIIERKAAKGNGVGVIVRTFAPVHFEGAWDKGGTCSKNTPYKKGEKKLEEKDVEIRKIGME ELQNAKEKAKQFGGFRFEVLDVTVLASMRPDGHPGAYRKPFPFAKGVEKNVQNDCTHWCLPGPIDTWNEIFIEMIKNWEE QLRSEE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 2 | 318 | 317 | 1.8E-152 | – | |
| PANTHER | 2 | 318 | 317 | 1.8E-152 | ||
| Pfam | 22 | 314 | 293 | 5.9E-84 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0316800.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…