Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0327200 |
| Transcript ID | LotjaGi2g1v0327200.1 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT5G65470.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|I3SJE6|I3SJE6_LOTJA Uncharacterized protein; Found in the gene: LotjaGi2g1v0327200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:80265716..80271539) extracted from Lotus japonicus Gifu genome v1.2.
GTTAATGACGGATAGCGTAGTGTAGCGGCAAGCCCAAAAAACGTTATTTCGAGCGCTATTACGGCGTTATAGCGCAAATA GCGGTGAATAGTGGAGTAGCGGTGAATCCCCAGGGCGCTACGCTATAGGCTATTACGCCGCTATAGCGTGCTATTAACAA GCGAGCTCTCATGTACCAAATATCAGTACAATTTCGTATACATACACTAAAACCAGCAACACTACAAACCACAATGTCTC TCTCACTCACTGCTTCACCTTCCATGGCTCCACCTTCATTACTGTAATTCAGAGTGAAAATTTCTGGTTAATTGGTAAAG GTACAAAAAGAAAGAAAGAGAGTAACCACTTTTACCTTAAAAGGTGTCGGTGGTCACAGAAAAGCAGCATTGAAAACAAA TAAAGGTTGTTGTTCCATGTTCCAATCCATGTCCAACAACAACGGTCACACACCCCACTACATTTCACGCACCACATCAC CATTCAACACCTGTGTATGTATGAATCTTGTGAGTGAGTGAGTGATGACCCTTCTCTTTGTTCTTGTGATTCTCACCTTA GTTAACGTAAAAATCCCAGCTAGCTAGCTAACCAGCTTTCTCTAATGGGGTCCCCTTCCCATTGAAAACGACACACGCTA TCTATCTCTCATCATTATTCAATTCGGTGAGTGAAGCCAGGTGTCCATGTGAATCGCATTCTCTTTCTTCTTCTGTGGAG CAAACACTTTTCAATTCACAAACCTCCAAACAGGTCATATACTATATATAAAAAGGGATCACTATGATAATGATGGGGTT TGTGTTTGGGTTTGCTTTCATTTCTCTGTTTCTTCATCTTCTCCATTAGCTTCTGATTCTCCATTCACATTTCTTGGTGG GTCAGTTCCAGCTAGATCCGAGGTTCAGTGAGCTCCTCTGACCATCATCATGGAGCTTGGCAACCACAATCATGCAGCTG CTACACTTGTTACATTTTGCTTACTGTTCTCCTTCACTTTCAGCCATGCTTCTTCTTTCTACCCAGTGAGTTGTTTTTTG CTTCTTTTCCTTCATGGGGCATTAGGCATTTTTTTTTGTGGGGTTTCATGGAATTTTTTTGTTTCAATTTCTAATTTTGG GGGAACAGGGATTATGCCGTTGTAATTTTTGTGGCAATTTTCTCTTTCTTAGTTGTTGGCATTATTCCTCATTATTCCTA TTATTATTTTTAATTTTTGATTTCTACTATTTCAATTTTCATCTTTCTGTTCATTTCATTATTGTTCCTAGAATAGAACT GATAGCTGATCTAATTGTGTTTATTTGGTGGTGTTTTCTGTGTTGTTCTTTGGTATTTGTTAATTGCTGGTGATTTTTTT GAGTTGCTAGCAGAAATTTACTTTAGAAATTGAAGTTTGATCACTCTTCTTTTGTTTTTTTGAGAGGGGTGGTGATAGGT GGTTGAAAATCTCTTGGGGGTATGGGTTTAACTTTACTATTTGAGAAGAAATAGAAAGGGGAAAATGAAGTTTCAATGTT TTAGGTTTCTTCCTTATGGTAAAGTTATTGGCATCTTGAAATTAACAAGAGGAAAGTATAGTGTGCTGTAGGTAATGGAT TCAATAGGCTTGGCTTGGCTGGTTGAACTTGTCTAACTAATTAATGAGGCTATAAATTGTAGATCACAGGATTCAGGGCA CGCGTTCCTGAGTTTGGTGTGGTGGATGAGGATGAGGTTCTGTGTCGGTACTTGTTAGAAATTTGAGCAAATCCACATAA AAAAAAAGCAAGAGTTAGCTAATTATTATTTGATTGAAAAAAATATTAAATTATGTGCCTACCCATCATAATGAGTAATG GAAGGCTTTCCTGGTTTTCATTCCACACTAATTAAATTTTGTAATTCTCGGTTGGTTTCTGGAACCTTTGAGTGAATTAA CATTGTACTTTGGCTCTGGAAAATCTTTTTTCTCAATAAAGTTTTGAAGAGAGTGGATTGGTTCCATGTTATTCTGATGA GCATGTTTCAGTTTTGTCTACTTTCCTTGTAAGAGTCCCTTGTTTCACTAGAATGTGTTGAATAATGATCATCGAGTAGG AGACAAACCACCGGATCAGTACATCATCATGTTCATCTGTCCTGTTCTAAGCTTTTTATTTGGTCCTGCACGTGTCATTT TTGTTGGTTTATTGGTTTCCATTATAACTTTCAGCTTGCTTTATGCAGGAATTGAATCCTATAAAACCGAGGCACTCACG TCTTCTCAGGAGTGCTGTGCAGCGTGAAACTGTAAGAGTTGATCTGAGTTGTGAACACATTTTCAGATTACTTTAACTGC CTTGTGTTATGCTTTTCATTTTTTATATCATTTTATTTTCTCCTTGTGTAGCCAACATCTCAACTTTCTGAAATATGGTC ACCTTTGGAAAACCAAGGATGGAAACCGGTTGAGTCTAGAAATAAGCCAAGTGAGTGAAATTAATATAATTTACTATATT TTGTTTTATCTCTGAGAGCACTTCGCATTTTCGCATGTCTAATGGTTTGTTTAATCTCTCTGTGGCTGACATTTGAATCA AAACAGCATTACCAGAGAAGTCCGAGGGATACATCCAGGTATTTCTTGATGGAGGTTTGAACCAGCAAAGGATGGGGGTA GGTATCTAAAGCCCGTTAATTAAATCAGATGTTTTCTCATGTGTAGCATGAAAGGTGTATAATTCAAAGTTATTGTTTAA TTATTTCTTGTAGATATGTGATGCAGTTGCTGTAGCAAAGATACTGAATGCAACTCTTGTGATCCCATACCTTGAATTAA ATCCTGTATGGCGAGATTCAAGGTGATTGCAGAAACCATCTGTTCATTTTGTTGCACTTTTTTGTCCCATGAATTGTGCA TGATGTAGTATTCTGATCTTGCATTTGTTTCCTTGCAGCTCCTTCATGGATATATTTGATGTGGATCATTTCATTGATGT ATTGAAGGATGATATTTCTATAGTTAAAGAGCTTCCTGAAGAGTACTCGTGGAGCACAAGGGAGTACTATGCCATTGCTG TTCGCGATACCAGAATCAAGAATTCACCTGTGCATGCATCGGCCAACTGGTATCTGGAAAATGTTTTGCCTGTCTTGCAG AGGTTGGTAATTACCTGAAATTACTTTAAATGATACTCCATGACTTGAATATTCAGGATCAAATATTTTTAAATAGTTGA TTCAATGATTAAACTAGACATTACTATTCATGATTACCACCACTTCAGCATTTGTTATGCAACATGATCAAATATAGAAC CTCTTCTGACCACTGTTCTGACTATTGCTTCTTAGTTCTTAAATAATCATTATAAATTATAACCATTTGGTGGAAGTCAG TGCAGTGACTATCCCCCACATTGTACAGTTCCTCAAATGATATATAGGAATATGATAAGGTTGAGGTGGGCTGTTGTTAA GTTATAGTACTATTACCAATTTGATGTTTATTTTCAGAAGGTAAAATATTCTTCGCTGCCCTGAGTATCACTCTGTTTAT TTAACATAAATATGACTTAGTTTAAGGTGTATATATTGTGATTATCCATAATTGTATATTCTCTCAATTATGAACTTCTA ATATCCGTTTTTTCTGTTGTAGTTTTGGTATTGCTGCAATCTCTCCATTTTCTCACCGCTTGAGTTTTGACAACTTGCCT ATGGATATCCAACACCTGCGCTGTAAAGTCAACTTTCAAGCTTTAGAATTTGTTCCTCATATTAGAACACTTGGAGATGC CCTCATCAACCGCCTTCGCTCTCCTCAAGGCTCTGCTGGAGAAATCGGTTCCAACTATCTTCAAGAAGTCACTGATGGAG GTGATAGTAAAAATGCAGGGAAATTCGTTGTTCTGCACCTCCGATTTGATAAGGTCTTTCTCTCTTTTTAATTATTCACA TCTATCATCTACATGGTTGTAAAGTTGGTTTTTGTCTTTTTCTTGGTTCTTTCATGTTGGTGGTGCAACTATCTCTAAAT TATGAGTGAATATTGGAAATATTTGTAGTTTATGATATAGGAAATAATATTTTAATGGAAATTGCACGAGTGTTTGGTAA TTTGGATCACTTGCTTCGCATCTCCGTATGTCTTTTTCTTTGTAGAACATCCACTCTGTCATGCATCTATCTGTAAATTC AGAGTTTTGGCTTATCAATTGGTTTTTGGCAGGATATGGCAGCTCATTCAGCCTGTGATTTTGGTGGGGGAAAAGCTGAG AAATTTGCCCTTGCAAAGTATAGACAGGTGATTTGGCAGGGAAGGCTTCTCAATTCTCAATTCACTGATGAAGAGTTGAG GAGTCAGGGTCGTTGCCCAATGACTCCAGAAGAGGTTGGATTGTTGCTAGCAGCTTTGGGATTTGACAACAGCACGCGTT TATATCTTGCTTCTCATAAGGTTTGATCATGTTGCTTATTTTGACACAGTATAGAGTTTAGACTCATTCATTTACTATAT GTGGCTTGTCATTTTCTAAAATTGGGAAGATGATCATGCCTTACCTGTTTTTAACTGAAGTAGTTGTCTTTCCCAGGTCT ATGGTGGAGAAGCAAGGATTTCAACTTTGAAGCAATTGTTTCCTCTGATGGAAGACAAAAAGAGCCTAGCTTCATCTTAT GAGCGTTTTCAAATAAAGGGCAAAGCTTCTCTATTAGCTGCACTTGACTACTATGTTGGCCTGCATAGTGACATCTTCAT CTCTGCTTCTCCAGGAAATATGCACAATGCAGTGGTGAGTTCTACTAGATGCTTTCTTAAATGGCTAATGAATCTTTTTT TAACCTGATGACATTGAAGAATATATAATTTTATGATGTTACTTCTCACGTAACTAATAGCATGTTTGGAAAATTGATTC TAAAGCAAAATTAATTCTTGGGAGAATCTGATGTGAGTAGCTTCTGGATCTCAGAATTGATTCTGAGAAAAAATAAGCTG ATCCAAACATGCTATTTGTCTGCAATGATGATATTTTATCCAATCCATTTATTTCATGTTGAGCCTAGTAAAGGTTAAAT GTTCATTTTCATTATGAGGTGCCCTTTGGGCCAGGATAAAAAACTTGTTATGAACATGTTACAATAATGAATTACTCATT TGGAATTTCGTACAAGAAAACTGTATTTACACAAGTTTCAGAGTAACAGCTATTTATGATCAATGTAAATGTCACCTAGG AGTTCTGATTACACTGACAAAAGGTTTTGTTTTGAAAATAAATATCATCATAATTATCTCTTTATGAAGCATGACAAGGT TGTTGGCATACGGTTGAGTTGAATTTATAGCTGATGATCAATGTTTGGTTGATGTAGGTTGGACACCGCACTTACTTGAA CTTAAAGACTATAAGGCCAAACCTGGTATTAATGGGTCAACTCTTCCTGAATAAAACCATGGAGTGGTCAGAGTTTGAGC ATGCTGTGGTCGAGGGTCACCAAAATAGACAAGGTCAACTGAGGCTGAGAAAGCCCAAACAGTCCATATACACATATCCT GCTCCTGATTGCATGTGCCAAGCTTAATATAGATGATAGTCAATATATTATTTAGGCTCTGTATTTTACTATAGTTCAGT GTCTTACTATTATTTGACATTTATAGGCGGTGAATAAAAGCATTTCCACTCTCCTTTTTCATGTTTATGATGTTCTTGGT AAGAGTGCTTGAGAGTAGTTGTATTGTGTGAGAGATGTATTTATGATATGATGGCACTCTTAGCAGGAGCAATATTTATC TATGATTCAATAACAGGAGCCCCATTGTTGTTTATCATTCAATCATTTATAGGGCATTTTTCAC
CDS sequence (LotjaGi2g1v0327200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCTTGGCAACCACAATCATGCAGCTGCTACACTTGTTACATTTTGCTTACTGTTCTCCTTCACTTTCAGCCATGC TTCTTCTTTCTACCCAGAATTGAATCCTATAAAACCGAGGCACTCACGTCTTCTCAGGAGTGCTGTGCAGCGTGAAACTC CAACATCTCAACTTTCTGAAATATGGTCACCTTTGGAAAACCAAGGATGGAAACCGGTTGAGTCTAGAAATAAGCCAACA TTACCAGAGAAGTCCGAGGGATACATCCAGGTATTTCTTGATGGAGGTTTGAACCAGCAAAGGATGGGGATATGTGATGC AGTTGCTGTAGCAAAGATACTGAATGCAACTCTTGTGATCCCATACCTTGAATTAAATCCTGTATGGCGAGATTCAAGCT CCTTCATGGATATATTTGATGTGGATCATTTCATTGATGTATTGAAGGATGATATTTCTATAGTTAAAGAGCTTCCTGAA GAGTACTCGTGGAGCACAAGGGAGTACTATGCCATTGCTGTTCGCGATACCAGAATCAAGAATTCACCTGTGCATGCATC GGCCAACTGGTATCTGGAAAATGTTTTGCCTGTCTTGCAGAGTTTTGGTATTGCTGCAATCTCTCCATTTTCTCACCGCT TGAGTTTTGACAACTTGCCTATGGATATCCAACACCTGCGCTGTAAAGTCAACTTTCAAGCTTTAGAATTTGTTCCTCAT ATTAGAACACTTGGAGATGCCCTCATCAACCGCCTTCGCTCTCCTCAAGGCTCTGCTGGAGAAATCGGTTCCAACTATCT TCAAGAAGTCACTGATGGAGGTGATAGTAAAAATGCAGGGAAATTCGTTGTTCTGCACCTCCGATTTGATAAGGATATGG CAGCTCATTCAGCCTGTGATTTTGGTGGGGGAAAAGCTGAGAAATTTGCCCTTGCAAAGTATAGACAGGTGATTTGGCAG GGAAGGCTTCTCAATTCTCAATTCACTGATGAAGAGTTGAGGAGTCAGGGTCGTTGCCCAATGACTCCAGAAGAGGTTGG ATTGTTGCTAGCAGCTTTGGGATTTGACAACAGCACGCGTTTATATCTTGCTTCTCATAAGGTCTATGGTGGAGAAGCAA GGATTTCAACTTTGAAGCAATTGTTTCCTCTGATGGAAGACAAAAAGAGCCTAGCTTCATCTTATGAGCGTTTTCAAATA AAGGGCAAAGCTTCTCTATTAGCTGCACTTGACTACTATGTTGGCCTGCATAGTGACATCTTCATCTCTGCTTCTCCAGG AAATATGCACAATGCAGTGGTTGGACACCGCACTTACTTGAACTTAAAGACTATAAGGCCAAACCTGGTATTAATGGGTC AACTCTTCCTGAATAAAACCATGGAGTGGTCAGAGTTTGAGCATGCTGTGGTCGAGGGTCACCAAAATAGACAAGGTCAA CTGAGGCTGAGAAAGCCCAAACAGTCCATATACACATATCCTGCTCCTGATTGCATGTGCCAAGCTTAA
Protein sequence (LotjaGi2g1v0327200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MELGNHNHAAATLVTFCLLFSFTFSHASSFYPELNPIKPRHSRLLRSAVQRETPTSQLSEIWSPLENQGWKPVESRNKPT LPEKSEGYIQVFLDGGLNQQRMGICDAVAVAKILNATLVIPYLELNPVWRDSSSFMDIFDVDHFIDVLKDDISIVKELPE EYSWSTREYYAIAVRDTRIKNSPVHASANWYLENVLPVLQSFGIAAISPFSHRLSFDNLPMDIQHLRCKVNFQALEFVPH IRTLGDALINRLRSPQGSAGEIGSNYLQEVTDGGDSKNAGKFVVLHLRFDKDMAAHSACDFGGGKAEKFALAKYRQVIWQ GRLLNSQFTDEELRSQGRCPMTPEEVGLLLAALGFDNSTRLYLASHKVYGGEARISTLKQLFPLMEDKKSLASSYERFQI KGKASLLAALDYYVGLHSDIFISASPGNMHNAVVGHRTYLNLKTIRPNLVLMGQLFLNKTMEWSEFEHAVVEGHQNRQGQ LRLRKPKQSIYTYPAPDCMCQA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_POSITIVE | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 8 | 8 | - | – | |
| SignalP_GRAM_NEGATIVE | 1 | 27 | 27 | - | – | |
| SignalP_EUK | 1 | 27 | 27 | - | – | |
| Phobius | 1 | 27 | 27 | - | – | |
| PIRSF | 5 | 502 | 498 | 4.3E-177 | ||
| Phobius | 9 | 20 | 12 | - | – | |
| PANTHER | 14 | 502 | 489 | 3.0E-298 | – | |
| PANTHER | 14 | 502 | 489 | 3.0E-298 | – | |
| Phobius | 21 | 27 | 7 | - | – | |
| Phobius | 28 | 502 | 475 | - | – | |
| Pfam | 88 | 440 | 353 | 9.3E-62 | ||
| CDD | 88 | 445 | 358 | 2.58087E-151 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi2g1v0327200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…