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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0421200 |
| Transcript ID | LotjaGi2g1v0421200.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Acyl-coenzyme A oxidase; TAIR: AT4G16760.1 acyl-CoA oxidase 1; Swiss-Prot: sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1; TrEMBL-Plants: tr|G7JXE0|G7JXE0_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi2g1v0421200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:91925729..91931891) extracted from Lotus japonicus Gifu genome v1.2.
TTATCTAGTTGGGTATTACGGGAATTTAGGGCCTCAGTGGATACTTAGATTTTGATAGAATAATAATATGTTATTTATAT AAAGTCAATCATGTGTGTTCCCCACAAAATTTGAGCTATTTGCTTCATATGAGAGTCTCTATGAGTGAATATTACCTTTA TTATTTAATTAAAAAGTTTGATTTCAGCATAATGTTAGGTTGATTTTTTTTTTGATAGTAATGTTAGTAAATTAGTACAT GACGATCACGGCTTGTTAGTTTGAATTCTGAATCCTTGATTGGTTGTATTTTCTAGGCTTTCAGAAAGGATGACAGAACC ACGCTTGGCAGAAAGGACCTATTTAAGAACACTTTGAGAAAAACAGCTTATGCATGGAAAAGGATCCTTGAGCTCCGTCT TAATGGTGTGTCTTCTGTTCTTTGTGTTGTTTGCATTTGGTTTATAATGTTGAACAGCACTCCCTATTACATCAAAATGT ACCATTCTTTATCGTGTTGTCAGTTGTAATCTTACAGAAAAGGAAGCTGCCAAGCTTAGGTCCTTTGTGGATGAACCTGC TTTTACGGATCTTCATTGGGTATGATTTTATTTCTTGTCCTGGTTTCGTCTCTACCTTTCATGCCTTGTTTTATTGATAT AGAAGGAATATGTAGATTACCATGATAAAAAGTGAGGGAATGGGATCATTTCTGCTGGGTGCAATATTAGTTTAAGGATT TCAAAGGATTAGCTTTATCTGCTTGTAGTAAATTTTAGCTGTTCATATCCTATTGCAGGGAATGTTTGTGCCGGCTATCA AAGGACAAGGCACGGATGAGCAGCAGCAAAAGTGGTTGCCTCTAGCTTACAAGATGCAAATTATTGGTTGCTATGCCCAA ACTGAACTTGGTCATGGATCCAATGTTCAAGGGCTAGAAACAACTGCAACATTTGATCCCAAAACAGATGAATTTGTTAT TCATAGTCCCACTTTAACTTCCTCCAAAGTAAGTGAAATGGGTGATAATTTCTGAGAGCCTTTACCGGTCTTTTACAATG TAATTTACTCTTTCAGATTTTAGAGTCCTACAATCATGGAAAACTGTCGAACCATTTTAATGCATTTCACTGAGTGTACT TGTTTGTTTTTGGATATACCATCACTCTTTTGTTGTTGATTTAAACAGTGGTGGCCTGGTGGATTGGGTAAGATATCAAC GCATGCTGTTGTGTATGCTCGTCTAATTACTGATGGTCAAGAGCAAGGAGTGCATGGTAATTTCCAAACTTTATCATCCA AGTTTCTGGTGTTAGAATCAGACATTTATTGATTATATATGTCCAATATGAAGGTTTCATTGTCCAGCTGCGGAGCTTGG ATGATCACTTACCTCTTCCAGGCATTACTGTTGGTGATATTGGAATGAAATTTGGGAGTGGAGCATATAATACCATGGAT AACGGGGTTCTAAGATTTGACCATGTTAGAATTCCAAGGAATCAAATGTTAATGAGGTAGTTCAATTTTACCTATTTGTC CACTCTAGCCTCACTAGAAGAAAATCCAACAATTGTAATTGGGGATTTCGTGGTGTATAGTATATAATAAATGAATGATC TTTGGAGGCAAAGTGACTGAAGTTCAAACCACAATTCAGTATACTTGTATCAGTTGAATCCACAGGGTGGTAAACTGAAT CTAATTCTAATAACAGTATTGACAAACACGACAACAATAACAGTATCTGGTTTGCTTAAGGTATTTTGTCTATGAATTGA GAACAATACTCTGGCTCATTTTCTTACTTTTAATCAGGCAAGCTATTAAATTCCTACTTAGGAGTAAACCCTAAACCGTA ATTGAAGGTTGAAATTGCTACATGATTGGTTTCATTTTTTTTTTCTGTTGAATGCAATTGGTAATGGGTTTCCTTTCAGA ATTATTTTCATGGGTAAACTGTAAACAAATGATGATTGAGAATAACAGACGGGAATGAAGGGTTGTGTTCATCCTGTGTA TAGCTCATCACTCCTTTCTGATGGTTAGGGGGCATGGAGTTCTGTCATGAATCAAGCATATAGTAACAGGAATTTTCAAT AATTATAAATGTCACGATGTGCTTGTCATAAAGCTAGCATGTAGTAACATGACTTGTCAATCACTATAAATGTCAAGGTG TGCATGTTAGTTTTGCCAACAGATTAATGGTGTTTTGTTTTTAATCTACCAGGGTCTCTCAGGTAACCAGAGAAGGAAAA TATGTGCAGTCCAATGTTCCAAGACAATTAGTTTATGGTACCATGGTATATGTGAGACAAGCAATTGTGTCTGATGCATC GATTGCTTTGTCACGAGCAGTTTGTATTGCTACAAGATATAGTGCTGTTAGAAGACAGTTTGGATCACATAATGGTGGTC TTGAGTCGCAGGTTAGCTTTAAAACCTTTTATTGATGCAGAATTGTTGCATGTTGGAGAATTCTGATTTTATTGAGATGT TCTAATGGGGATATCTTTTTCTAATAAGCAAATTTAAGAAACAAAATGGAGGCTGAATCTGAAATTACAGTGCACAAAAA AATAAGCCAATTTACCTTTATTTTAGGTTGCATTCATGAAGGTTTGCTTTTTACCAGAACATGTTTTTGTTGAACTTATA GTGGGAAGGTTGATGGGATTTCTCCTTATGCTTGGATTTACATTCGTTGTTGAATGAGTGTCTTTGTGCTCTCTGTTTCT ATTTAGGTGATTGATTACAAGACACAGCAGGCTAGGCTCTTCCCTTTGCTAGCTTCTACTTATGCTTTCAGGTTTGTTAG TGAGTGGCTGAGTTGGCTTTATACGGATGTCACACAAAGATTACAAGCTGGAGATTTTTCAACATTGCCTGAGGCACATG CATGCACTGCTGGATTGAAATCATTGACTACTTCAATCGCTGCTGTATGTTATTACTTGAATTCATTTTTCTACCGTTTG ACCTTAGTGAATTTAGCTAATTTTAAGCTGTTTAGATAACATTTTTTGGACACAATCTTTAGATACTATTTAAAACATTG TTTATTATTTCATGTTGAGGTCTTTTTTCTATGTTGTGCTGTTCTTTAGGTGAATTGGCATTAATGAAATTTTACGGCTT TTCTCTCTCTATATATATTGAATCTTAGTTCCTTTCTGTGTGCCTTATGCAGTTCATGTTGTTATTTGAAATGTTAATGT TTTGAAATGGGTGGTTGTCATTGTGTATCAATGTTAAAACTTTCAAATGAATTGTCTACAGATTTTTAACCATGATTGTA CATGCATATAATCCTCCATCCCATTTGTTTCCAGTTTTAATTTTAAAGTAAAATTAATACGACAGAGCATAGCATGTTGT GGTTTATATATGATGCAAACATTTGCCGAACATAAACAAATGTTTAGAGGAGCCAAAATAATATTTTAATGCACAAATAT AAGAATGTGTGTATAGATATGTTTATATATCTGTTAGGATATAGTTTGTTGACATAATATCTCAACAATATATATATACA TATATATATATATTATTTTTATAAATAATTAATTATGCATATATAGTTTTAAAAAAAAAATTACGCATATATAACCTTTT AAAAGAAAAAATATCCGTTGGAACCATGGCTCCCCGTCATTGAAATATCCTTCTTTTGCTTGCAAGATCAATTATGCATC ATATTTATTTCACTATTCTGTAGTCTGTACTTCCACCGAACCGCTTAATTTTCCTGGAATGCTGGTCATTATAATCTGTT ACCATTAATTTATTATTCATGTCATCTATTTCTACGTGGGGTAACTGCCTGGATGATTATTTTTCTCCTTGTTTAAATCG TTTAACTGTTTCTTTTGTTGTTAATGTGCTATTATCCTTTGATGGTATCTTACTATATGGATTTCATTTTATAACTGTGA TCTTTTCAAGTTCAAATAATATTAAATTAACTTGATATTGCAGGATGGAATTGAAGAATGTCGTAAACTATGTGGTGGTC ATGGTTATCTTAATAGCAGTGGTCTTCCTGAGCTATTTGCAGTGTATGTTCCTGCTTGCACTTATGAAGGAGACAATACT GTGCTGCTTTTACAGGTTACTTGAATGCTAAATATTTTGCATTTCATTTTGTTTATCATTATATAATGTATCTTTACAAT TTCCTTCGTTATCTTGGTTTGTTTTGACATCTAGAAATTTTCATGTAGGTGGCAAGGCATCTTGTGAAGACTATTTCTCA GCTGGGCTCTGGAAATAAGCCTGGTGGTACTACAGCTTATTTGGCTCGAGTGGAACAATTGATGCAATATCACTCTGATG TTAAAAAAGGTACCATGAAATTGGATAATATACAATCTTAAAAGATCTTGTGATATCCAAGTCAAATAGGGTTTCAATTA AGATTACTAAGTATGTGATAGGCTGAATGCTGATATTTGGCCAAGGCCATCTAAGGTTTATGTTAGAAAAAATAAAAGGC AGTCTTGATATATCACTATATTTAGTTATAATTTATAAGGCTGTAGTGTCTTGTATGTGGTTGATACTGTTTAGTATCAG AACTCGGTTATGCTTTTATGTGTTGTAGTAGGGTAGTTATGTTTTTATGTGGCAGTTAATGCTTTTATTAGGTGATAGGT ATTACTTAGTATTGGGAGGGTGTTGGTTGCAGTGAAGTTATGATGTTTGCAGATTGTACTTCTGTTATATTCAGATCTGG TGGTATATATACCCGATTGATTCTCTAATGAATATTCTGGATGCTGTGTTTAAATTACTGAGTCCAGCACTATGCCTGTG TCCTTTGAGTTGCAATTTTATACTTATTCTGCTTTTGATTTCTCGCAGCTGAGGATTGGTTGAAGCCTAATGTAGTGGTG GCAGCATTCGAAGCTAGGGCTGCTAGGATGTCTGTTGCTTGTGCTCAAAATCTTAGCAAGTTCACTAATCCTGAAGAGGG TAAGTGATTCGATTTTGTTCAACTCAAGCTATATTTTGTCTATTGTAGTTTAGTTTCCTTGACTCTATTGGAAATCACCT GTCTAAAGGCAGGATACTGGTTTCTGACACGTTTGGAGGAATAGTTTGAATATGTAGTCCTGTAAAAAAATATTTTTTGC GTACATTACGTTTGTATATATTAAATACAGTGTAAAACTCACATTTCTATTAAGATGACACACACACACATAATGTAGAA AAGTGTTGATTTATTATTGTAATTTGTGCAAAGTGGTTGAATATTTTGTTATTTTATAATGGATTTTCTGGAAGTAGGTT TTCAAGAACTTACAGCTGATCTAGTTGAGGCAGCAACTGCTCATTGCCAGTTAATCATTGTTTCCAAGTAAGCTTTTTCC CAAATTTTACGCCTCCATTGTTTTTAATTAGCTTATGATTGTTATCTGTATTAACTTCATGTTTGCATCTGGAAAGAGCA AGTCTAATATATTCTAGAGAAGCATAGTGGGAGTAGTTCAAAAAAAAATATACAGTTTAGTTGTGAATTAGAATTCTATG CTTTAAACTATGATTTGTTGGAATATTAGTACATTAAAACCCTGTGTTTTTTCAGATTTATTGATAAGTTGCAGAAAGAC ATACCTGGAAAGGGTGTGAAACAGCAATTAGAAGTTCTTTGCAGCATTTATGCTTTGTCTCTTCTTCATAAGCATCTGGG AGATTTTCTTTCCGCTGGCTGCATAAATCCACTACAAGGATCACTTGCCAATGAGCAGCTGAGGTCCTTGTATTCCCAGG TTTGTCCAAACATTTTCCAGTCTATAGCATGTTTGAAAATATTTCTTCAATTGATTGTGTAGTCAAAATCAATTATGGGG AGAAGAGTAGTTTCTGAAGAAGAATAAGATGAACCAAACATACTATACATCACTTACTGGTTTCTCTTAACTTTATTACA TGAAGGCTGATGATTCATTTTATGTGTGGTTAGGTTCGTCCTAATGCAATTGCACTTGTTGATGCGTTTAATTACACTGA TCACTACCTTGGTTCGGTTCTTGGGCGCTACGATGGTAATGTGTATCCCAAGTTGTATGAGGAGGCATGGAAGGATCCTT TGAATGACTCAGTTATTCCTGATGGCTTCCATCAGTATGTTCAACCAATTCTTAAGCAGCAACTGCGTAATGCAAGACTA TAG
CDS sequence (LotjaGi2g1v0421200.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTGTGCCGGCTATCAAAGGACAAGGCACGGATGAGCAGCAGCAAAAGTGGTTGCCTCTAGCTTACAAGATGCAAAT TATTGGTTGCTATGCCCAAACTGAACTTGGTCATGGATCCAATGTTCAAGGGCTAGAAACAACTGCAACATTTGATCCCA AAACAGATGAATTTGTTATTCATAGTCCCACTTTAACTTCCTCCAAATGGTGGCCTGGTGGATTGGGTAAGATATCAACG CATGCTGTTGTGTATGCTCGTCTAATTACTGATGGTCAAGAGCAAGGAGTGCATGGTTTCATTGTCCAGCTGCGGAGCTT GGATGATCACTTACCTCTTCCAGGCATTACTGTTGGTGATATTGGAATGAAATTTGGGAGTGGAGCATATAATACCATGG ATAACGGGGTTCTAAGATTTGACCATGTTAGAATTCCAAGGAATCAAATGTTAATGAGGGTCTCTCAGGTAACCAGAGAA GGAAAATATGTGCAGTCCAATGTTCCAAGACAATTAGTTTATGGTACCATGGTATATGTGAGACAAGCAATTGTGTCTGA TGCATCGATTGCTTTGTCACGAGCAGTTTGTATTGCTACAAGATATAGTGCTGTTAGAAGACAGTTTGGATCACATAATG GTGGTCTTGAGTCGCAGGTGATTGATTACAAGACACAGCAGGCTAGGCTCTTCCCTTTGCTAGCTTCTACTTATGCTTTC AGGTTTGTTAGTGAGTGGCTGAGTTGGCTTTATACGGATGTCACACAAAGATTACAAGCTGGAGATTTTTCAACATTGCC TGAGGCACATGCATGCACTGCTGGATTGAAATCATTGACTACTTCAATCGCTGCTGATGGAATTGAAGAATGTCGTAAAC TATGTGGTGGTCATGGTTATCTTAATAGCAGTGGTCTTCCTGAGCTATTTGCAGTGTATGTTCCTGCTTGCACTTATGAA GGAGACAATACTGTGCTGCTTTTACAGGTGGCAAGGCATCTTGTGAAGACTATTTCTCAGCTGGGCTCTGGAAATAAGCC TGGTGGTACTACAGCTTATTTGGCTCGAGTGGAACAATTGATGCAATATCACTCTGATGTTAAAAAAGCTGAGGATTGGT TGAAGCCTAATGTAGTGGTGGCAGCATTCGAAGCTAGGGCTGCTAGGATGTCTGTTGCTTGTGCTCAAAATCTTAGCAAG TTCACTAATCCTGAAGAGGGTTTTCAAGAACTTACAGCTGATCTAGTTGAGGCAGCAACTGCTCATTGCCAGTTAATCAT TGTTTCCAAATTTATTGATAAGTTGCAGAAAGACATACCTGGAAAGGGTGTGAAACAGCAATTAGAAGTTCTTTGCAGCA TTTATGCTTTGTCTCTTCTTCATAAGCATCTGGGAGATTTTCTTTCCGCTGGCTGCATAAATCCACTACAAGGATCACTT GCCAATGAGCAGCTGAGGTCCTTGTATTCCCAGGTTCGTCCTAATGCAATTGCACTTGTTGATGCGTTTAATTACACTGA TCACTACCTTGGTTCGGTTCTTGGGCGCTACGATGGTAATGTGTATCCCAAGTTGTATGAGGAGGCATGGAAGGATCCTT TGAATGACTCAGTTATTCCTGATGGCTTCCATCAGTATGTTCAACCAATTCTTAAGCAGCAACTGCGTAATGCAAGACTA TAG
Protein sequence (LotjaGi2g1v0421200.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFVPAIKGQGTDEQQQKWLPLAYKMQIIGCYAQTELGHGSNVQGLETTATFDPKTDEFVIHSPTLTSSKWWPGGLGKIST HAVVYARLITDGQEQGVHGFIVQLRSLDDHLPLPGITVGDIGMKFGSGAYNTMDNGVLRFDHVRIPRNQMLMRVSQVTRE GKYVQSNVPRQLVYGTMVYVRQAIVSDASIALSRAVCIATRYSAVRRQFGSHNGGLESQVIDYKTQQARLFPLLASTYAF RFVSEWLSWLYTDVTQRLQAGDFSTLPEAHACTAGLKSLTTSIAADGIEECRKLCGGHGYLNSSGLPELFAVYVPACTYE GDNTVLLLQVARHLVKTISQLGSGNKPGGTTAYLARVEQLMQYHSDVKKAEDWLKPNVVVAAFEARAARMSVACAQNLSK FTNPEEGFQELTADLVEAATAHCQLIIVSKFIDKLQKDIPGKGVKQQLEVLCSIYALSLLHKHLGDFLSAGCINPLQGSL ANEQLRSLYSQVRPNAIALVDAFNYTDHYLGSVLGRYDGNVYPKLYEEAWKDPLNDSVIPDGFHQYVQPILKQQLRNARL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 556 | 556 | 0.0 | – | |
| Pfam | 1 | 28 | 28 | 3.3E-10 | ||
| PIRSF | 1 | 555 | 555 | 2.9E-203 | ||
| SUPERFAMILY | 1 | 156 | 156 | 5.76E-50 | ||
| Gene3D | 1 | 28 | 28 | 7.9E-10 | ||
| PANTHER | 1 | 556 | 556 | 0.0 | – | |
| Gene3D | 29 | 165 | 137 | 2.5E-61 | – | |
| Pfam | 30 | 142 | 113 | 8.2E-12 | ||
| SUPERFAMILY | 172 | 355 | 184 | 1.82E-58 | ||
| Gene3D | 175 | 345 | 171 | 3.1E-65 | – | |
| SUPERFAMILY | 360 | 553 | 194 | 7.01E-56 | ||
| Pfam | 376 | 552 | 177 | 7.6E-53 | ||
| Gene3D | 376 | 504 | 129 | 9.9E-46 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Acyl-CoA oxidase activity | Catalysis of the reaction: acyl-CoA + O2 = trans-2,3-dehydroacyl-CoA + hydrogen peroxide. | ||
| Cellular component | Peroxisome | A small organelle enclosed by a single membrane, and found in most eukaryotic cells. Contains peroxidases and other enzymes involved in a variety of metabolic processes including free radical detoxification, lipid catabolism and biosynthesis, and hydrogen peroxide metabolism. | ||
| Biological process | Fatty acid metabolic process | The chemical reactions and pathways involving fatty acids, aliphatic monocarboxylic acids liberated from naturally occurring fats and oils by hydrolysis. | ||
| Biological process | Fatty acid beta-oxidation | A fatty acid oxidation process that results in the complete oxidation of a long-chain fatty acid. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and occurs by successive cycles of reactions during each of which the fatty acid is shortened by a two-carbon fragment removed as acetyl coenzyme A; the cycle continues until only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively). | ||
| Molecular function | Oxidoreductase activity, acting on the CH-CH group of donors | Catalysis of an oxidation-reduction (redox) reaction in which a CH-CH group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor. | ||
| Molecular function | Flavin adenine dinucleotide binding | Interacting selectively and non-covalently with FAD, flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes, in either the oxidized form, FAD, or the reduced form, FADH2. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. | ||
| Molecular function | FAD binding | Interacting selectively and non-covalently with the oxidized form, FAD, of flavin-adenine dinucleotide, the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. |
Expression pattern of LotjaGi2g1v0421200.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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