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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR037069
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We have found 24 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 6.831s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
LotjaGi1g1v0442600.1
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93986036 93994332 +
2 domain predictions
3 GO terms
LotjaGi1g1v0442600.2
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93986115 93994169 +
2 domain predictions
3 GO terms
LotjaGi1g1v0442600.3
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93986127 93993853 +
2 domain predictions
3 GO terms
LotjaGi1g1v0442600.4
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93986291 93991462 +
2 domain predictions
3 GO terms
LotjaGi1g1v0442600.5
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93987196 93991462 +
2 domain predictions
3 GO terms
LotjaGi1g1v0442600.6
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|A0A072U1Y7|A0A072U1Y7_MEDTR Acyl-CoA dehydrogenase; Found in the gene: LotjaGi1g1v0442600 LjG1.1_chr1 93987347 93991462 +
2 domain predictions
3 GO terms
LotjaGi2g1v0362500.1
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G45300.1 isovaleryl-CoA-dehydrogenase; Swiss-Prot: sp|Q9FS88|MBCD_SOLTU 2-methylacyl-CoA dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A151TN61|A0A151TN61_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0362500 LjG1.1_chr2 85984707 85991606 -
2 domain predictions
3 GO terms
LotjaGi2g1v0362500.2
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G45300.1 isovaleryl-CoA-dehydrogenase; Swiss-Prot: sp|Q75IM9|IVD_ORYSJ Isovaleryl-CoA dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A151TN61|A0A151TN61_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0362500 LjG1.1_chr2 85986227 85990365 -
2 domain predictions
3 GO terms
LotjaGi2g1v0362500.3
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G45300.1 isovaleryl-CoA-dehydrogenase; Swiss-Prot: sp|Q75IM9|IVD_ORYSJ Isovaleryl-CoA dehydrogenase, mitochondrial; TrEMBL-Plants: tr|A0A151TN61|A0A151TN61_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0362500 LjG1.1_chr2 85986227 85990968 -
2 domain predictions
3 GO terms
LotjaGi2g1v0421200.1
n.a. Acyl-coenzyme A oxidase; TAIR: AT4G16760.1 acyl-CoA oxidase 1; Swiss-Prot: sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1; TrEMBL-Plants: tr|G7JXE0|G7JXE0_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi2g1v0421200 LjG1.1_chr2 91925148 91931891 +
2 domain predictions
3 GO terms
LotjaGi2g1v0421200.2
n.a. Acyl-coenzyme A oxidase; TAIR: AT4G16760.1 acyl-CoA oxidase 1; Swiss-Prot: sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1; TrEMBL-Plants: tr|G7JXE0|G7JXE0_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi2g1v0421200 LjG1.1_chr2 91925433 91930126 +
2 domain predictions
3 GO terms
LotjaGi2g1v0421200.3
n.a. Acyl-coenzyme A oxidase; TAIR: AT4G16760.1 acyl-CoA oxidase 1; Swiss-Prot: sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1; TrEMBL-Plants: tr|G7JXE0|G7JXE0_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi2g1v0421200 LjG1.1_chr2 91925433 91931891 +
2 domain predictions
3 GO terms
LotjaGi2g1v0421200.4
n.a. Acyl-coenzyme A oxidase; TAIR: AT2G35690.1 acyl-CoA oxidase 5; Swiss-Prot: sp|Q9ZQP2|ACO12_ARATH Putative peroxisomal acyl-coenzyme A oxidase 1.2; TrEMBL-Plants: tr|G7JXE0|G7JXE0_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi2g1v0421200 LjG1.1_chr2 91925727 91930812 +
2 domain predictions
3 GO terms
LotjaGi2g1v0421200.5
n.a. Acyl-coenzyme A oxidase; TAIR: AT4G16760.1 acyl-CoA oxidase 1; Swiss-Prot: sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1; TrEMBL-Plants: tr|G7JXE0|G7JXE0_MEDTR Acyl-coenzyme A oxidase; Found in the gene: LotjaGi2g1v0421200 LjG1.1_chr2 91925729 91931891 +
2 domain predictions
3 GO terms
LotjaGi3g1v0194100.1
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28169182 28175654 +
2 domain predictions
3 GO terms
LotjaGi3g1v0194100.2
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28169191 28175885 +
2 domain predictions
3 GO terms
LotjaGi3g1v0194100.3
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28170668 28175317 +
2 domain predictions
3 GO terms
LotjaGi3g1v0194100.4
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD2|I1JLD2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28171723 28175317 +
2 domain predictions
3 GO terms
LotjaGi3g1v0194100.6
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G51840.1 acyl-CoA oxidase 4; Swiss-Prot: sp|Q96329|ACOX4_ARATH Acyl-coenzyme A oxidase 4, peroxisomal; TrEMBL-Plants: tr|I1JLD3|I1JLD3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0194100 LjG1.1_chr3 28171832 28175317 +
2 domain predictions
3 GO terms
LotjaGi4g1v0200600.1
n.a. Acyl-coenzyme A oxidase; TAIR: AT4G16760.1 acyl-CoA oxidase 1; Swiss-Prot: sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1; TrEMBL-Plants: tr|Q945U3|Q945U3_SOYBN Acyl-coenzyme A oxidase; Found in the gene: LotjaGi4g1v0200600 LjG1.1_chr4 46534957 46543976 +
2 domain predictions
3 GO terms
LotjaGi4g1v0200600.2
n.a. Acyl-coenzyme A oxidase; TAIR: AT4G16760.1 acyl-CoA oxidase 1; Swiss-Prot: sp|O65202|ACOX1_ARATH Peroxisomal acyl-coenzyme A oxidase 1; TrEMBL-Plants: tr|A0A0L9TQ69|A0A0L9TQ69_PHAAN Acyl-coenzyme A oxidase; Found in the gene: LotjaGi4g1v0200600 LjG1.1_chr4 46535235 46542584 +
2 domain predictions
3 GO terms
LotjaGi6g1v0252100.1
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G06810.1 acyl-CoA dehydrogenase-like protein; Swiss-Prot: sp|Q8RWZ3|IBR3_ARATH Probable acyl-CoA dehydrogenase IBR3; TrEMBL-Plants: tr|V7AZ54|V7AZ54_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0252100 LjG1.1_chr6 56424768 56431797 -
2 domain predictions
3 GO terms
LotjaGi6g1v0252100.2
n.a. Acyl-CoA dehydrogenase-related family protein; TAIR: AT3G06810.1 acyl-CoA dehydrogenase-like protein; Swiss-Prot: sp|Q8RWZ3|IBR3_ARATH Probable acyl-CoA dehydrogenase IBR3; TrEMBL-Plants: tr|A0A1J7FV79|A0A1J7FV79_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0252100 LjG1.1_chr6 56424768 56431818 -
2 domain predictions
3 GO terms
LotjaGi6g1v0252100.3
n.a. Acyl-CoA dehydrogenase; TAIR: AT3G06810.1 acyl-CoA dehydrogenase-like protein; Swiss-Prot: sp|Q8RWZ3|IBR3_ARATH Probable acyl-CoA dehydrogenase IBR3; TrEMBL-Plants: tr|A0A0R0GAV8|A0A0R0GAV8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0252100 LjG1.1_chr6 56424768 56431818 -
2 domain predictions
3 GO terms