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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0441900 |
| Transcript ID | LotjaGi2g1v0441900.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | UDP-glucose 4-epimerase; TAIR: AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5; Swiss-Prot: sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48; TrEMBL-Plants: tr|A0A0L9TAX6|A0A0L9TAX6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0441900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:93797309..93801694) extracted from Lotus japonicus Gifu genome v1.2.
CTCCTTCTTCGGAGTAGTCATGGCTTCCTCGCGCGTCAGCACCATCACCAAACTCACCACCTCTTCTCCACCATACTTAA ACTCCCCTCACTTTCTGCCACCGCCACTAAACAACAAGGTTTCTTTCCAGAAAACTCAAAACGGTGGTTCTTCAACCATG CTCCCCAAAGCGGTGCTGGTGACCGGTGGAGCCGGTTACATCGGTAGTCACACCGTTCTTCAGCTCCTGCTCGGCGGTTT CAAAACCGTCATCGTCGATAACCTTGACAATTCCTCCGATGTTGCAGTCAACAGGGTCAAGGAGCTCGCCGGAGAATTTG GGAATAATCTCTTCTTTCACAAGGTGCTCTTTCTTTCACGCGCTTTGTTCAATTTCGATTGGTTGCATTACTTCACCGTT GTCAAAATTTGATCTTGTTTTCCCGAAATTGTTAATTTTAGGGATTTAGGTTTCAGTATTACACTATTACTGCTTGCTGT TTCTAATTTTGTAATTAGTCTAGAGTAAATTCGTGAAATTTAGTAATTGGGTGGGTCCAGAAAAGGTAAAGATTTATGCT TTGTGTCGGTAGACGGTGACAGGTTAAAAATTGTGTGTGTTTAAGAATAATTGGATTTGGTGCTTTGTCTGTTTCAAATT AATTCGAAAAGTTGCATGGTGTAGTTTTTGATGTGATGTAATTTTCGGGGAATGGCTGGTTTATTTTGCTGTTAGATCTA AGCTTGTTATATTGCTTTCTATGATGTTTGATTTGATTAACAATTTTGAAAATTTTCATATTTTTTTCCTCTTTTATAAG CCTAAGTTGTTGACCCCCCATCTTTCATGGTTTTTGACTCAATTGTGATGGTTTCTTTTGCATTTAGAACACAAATTTGT TTGCTGTTAGTTTGCAGGCTATGGTTATGATACTTATGTATGAATTCAGTTCGGTTATCTACCCATGTCTTGTTTTTAAT TTTTAAATATTCTAGCAGAGGCAATCATAGATGCCAGACACTTCAATTACTTAATTTTACATTACATGTGGTCTAAGTGA ATGCAATCAGTTTATGATATGGTATGACCCTTCATTATATGTTACTCATTGCAGGTTGACCTCCGGGACAGAGCTGCGCT GGAGCAGATTTTTGTTTCCACAAAGTAAGGATTATGACAGAAGCTTCTTTATTTATTTCTTTTTTCTCAGTGCTCTGGAG TGTATGACAGAAGTTTCTGTAATAATTACAAAAAAGATTCGTTGGGGCCTGATGTTCTCTTATAGTTGTAAATAATCATT GATCTCATAACTGTTTCTTATCACTTTTTTCTTTTCTTGTAGGTTTGATGCAGTCATACATTTTGCTGGACTGAAAGCGG TAGGTGAAAGTGTACAGAAACCATTACTATACTACAACAACAGCTTGATTGGGACAATCACTCTATTGGAAGTCATGGCT GCCCATGGATGCAAGAAGGTAAATTACTACTTACATTATCGACTTTCACTACATATAGAGAATATTCTCGACTTCTTTGC CACTGTTATGTGTTTTGCCTCTTCCTATCTGTCGAGTAAAGTCCCTTCTTATTGCTTGGGGTGCAAACATATCTATTAAC TAATTGAATTCCCTTAAGTATTGCTTGTATATCATTTAAATTTCAGTGGAATAATTGGTTCCAACAGCCATGATAGAATA TTGATGGGCTCTAGTTATTGCTTCTGCTGCTACAACTTCTGTTATTTTTTGGAGGATGCTTATTCTCCTCATGTTCGCTA GAAAGTTCATTTGAGGGGAAAAAGGTGTAGCCCCTTGTTAAGTCTCAAAATGAACTTGGTGGTCCTTAATGTGTTACTGT CATAGACTCATAGTCATTTAGTTGTGATAGTGAGGAAGTGCTTAGCATTTAGATTACCATTGTTTTTTGACACATAACTT CCTTGAAGTGTGTTGTGACTTGTGAGGGAAGGTTGGTTATGCATTTTATTGCCTTCATGCTTACATTTTGCTTATTTCGC TGATTTTGCATTTGATTGGTTTCAGCTTGTGTTCTCATCTTCAGCCACTGTGTACGGTTGGCCAAAGGAGGTTCCATGTA CAGAAGAGTCCCCTATATCAGCAATGAACCCATATGGACGAACTAAGGTATGATTAGGAAACTGTTAAGGGTATTTGTTA GAAGGTGAACCTGGGTTTGATTCAAACTATTTGTCTCTTCTAGCTAGTCTTGGTCTCTTGGGTCTTTGTACAAAACATCT TCTACAAAGTTGATAAGTTCCTTGTAATTTTCTTCTTTGTTGTCTTAATAACTTTCTCCCTTTTTTCAAAAAGAAAATAA ATCTTAACTATTAATATGTCAATGCTTGCATTGGAATCTTGCAATGATATCTGGTAACATGTTTGTCTTTTTAGCTTATC ATTGAAGAAATTTGTCGTGATGTCCACCGTTCAGATCCAGACTGGAAAATGATATTATTAAGATACTTCAACCCAGTGGG TGCACACCCTAGTGGTCATATTGGGGAGGATCCTCGCGGAATTCCGAACAATCTCATGCCATTTGTTCAGCAAGTAGCAG TTGGCAGACGGCCTGCACTGACAGTTTTTGGAAATGATTATAATACTATTGATGGCACTGGGGTATGATCTCACAAACTT TGGCTTTTGCACTGAAATGTTTTCTTGGAAAACGAAACTTGCATTGAGTTTTAGCAAAATCTCACACTACCTACCATTTT CCTTTGATTTGGAATATTTCGATTCTTATCTTTATATATGATGCACACATCCTGACCTACCTTAACTACGGGTCATTTCA TGTGCACAATGTCTCTCTGTCTCCCTCCCCATTTGAATTCGCTTGATAGAATGTTTGCTTGAGCTTACTGACTTCCCTTA GTGAATGATTTTTGTTGAGTGCATGCATTTATTTCCCATTTTTTGAAGATCTACTTGCGATTTCTTCATCAAGGATCTTA CTGGATGGTTCTTACCCTAATTTCAGGTTCGGGATTACATTCATGTTGTTGATCTAGCAGATGGGCACATTGCTGCACTG CTTAAACTAGAAGAATCTGATATAGGTATGATTCAAAATTTATCATTATCTTCTAATATTTATCCGTGTCAGGTTTCAGT GGAAATGTGGTCAATTTACAGGGGCAATATTTTTAGCCTTTACTATTTGTGGTGTGTATGTGTGTAATGCAGGTTGTGAG GTTTATAACTTGGGAACAGGAAAGGGAACCTCAGTTTTGGAGATGGTTAAAGCTTTTGAACAGGCCTCTGGAAAGGTTAT AGACTAAAATTTCTTGCTCTGGCCCCATATCTGTCATCATAATCATTGCTGTCAACTACACTGCCGTTTATTGTTTGAGA AAAATGTTGCTCACATGCCTTTTTTTCCTTCTTGGGGATGGGCTGTTCTGAATTTTAATTTTGCTGAGAATGTAGTGCTT CATGTGCATTCTCAGCGTAGTTTTGTGGCGTGTACTCAGCAACCGAATCATCTTGCAGTTAAGTGTTACCCTGCTTGGGT CCTAAGATAAAACTGGGATTGAATATGAATTGATCTAACTTTAGTTGAGGATCTGTAGCTTGTCTAAGTTAAATTGGTTA CCCTAATTGCCACCCTTTGCTGTATGGAATATGGAGTTCTAGAGAGACATGAGAAGTGGCGACAGAGTGTTCTAAGAAAA ACAATCATCCTAAGATTCTGTCTATCCAACTTATCTTTAGTTTTAAATTTAATGTTTCTTTTGGCTATATTCCTAAGATC TTGAACTTCTTGAGCCACATCATATATATTATTGAGCTATTCTACGATGCACTAATAGTTAATTCTCATGATTATTTCAG AAAATTCCACTTGTGATGGCTGGCCGTAGACCTGGTGATGCTGGAATTGTTTATGCATCAACAGATAAAGCAGAAAGGGA ACTTAAGTGGAAGTAAGTGTTAAATTTTCTTCAAATGGATGGAATTCATGACATATAGGATATAGCTGATTAGGCTTTGC TTTCTAATTTCTTGTTTGGAGTGGACATCACCATCAAGTTAATAATAATCATAATCCTCCTCTTCCTGAATATCATATCC AGGCATTAATTGCACATTGGCACGTATATCTCAGTTTCTTCCAATTTACAACTATTATATCATGTAACATTTACACATTG ATAACTTCTGGGTGAGGTTTTGTGGAGTTCTTTTTTGTTTTTCTCTAAAATATTTATCTTATGTGACAGGGCAAAATATG GAATTGAAGAGATGTGCCGTGATCAATGGAATTGGGCTAACAAAAACCCCTTTGGCTATGCATCTCAGGATTGAGCCGAT TAACGTTGACAATTATCACCTATATATTATATATATGTTCTCTTTTGGGTTCTTTCTCAGGTTTGA
CDS sequence (LotjaGi2g1v0441900.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTTCCTCGCGCGTCAGCACCATCACCAAACTCACCACCTCTTCTCCACCATACTTAAACTCCCCTCACTTTCTGCC ACCGCCACTAAACAACAAGGTTTCTTTCCAGAAAACTCAAAACGGTGGTTCTTCAACCATGCTCCCCAAAGCGGTGCTGG TGACCGGTGGAGCCGGTTACATCGGTAGTCACACCGTTCTTCAGCTCCTGCTCGGCGGTTTCAAAACCGTCATCGTCGAT AACCTTGACAATTCCTCCGATGTTGCAGTCAACAGGGTCAAGGAGCTCGCCGGAGAATTTGGGAATAATCTCTTCTTTCA CAAGGTTGACCTCCGGGACAGAGCTGCGCTGGAGCAGATTTTTGTTTCCACAAAGTTTGATGCAGTCATACATTTTGCTG GACTGAAAGCGGTAGGTGAAAGTGTACAGAAACCATTACTATACTACAACAACAGCTTGATTGGGACAATCACTCTATTG GAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCCACTGTGTACGGTTGGCCAAAGGAGGTTCC ATGTACAGAAGAGTCCCCTATATCAGCAATGAACCCATATGGACGAACTAAGCTTATCATTGAAGAAATTTGTCGTGATG TCCACCGTTCAGATCCAGACTGGAAAATGATATTATTAAGATACTTCAACCCAGTGGGTGCACACCCTAGTGGTCATATT GGGGAGGATCCTCGCGGAATTCCGAACAATCTCATGCCATTTGTTCAGCAAGTAGCAGTTGGCAGACGGCCTGCACTGAC AGTTTTTGGAAATGATTATAATACTATTGATGGCACTGGGGTTCGGGATTACATTCATGTTGTTGATCTAGCAGATGGGC ACATTGCTGCACTGCTTAAACTAGAAGAATCTGATATAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACCTCA GTTTTGGAGATGGTTAAAGCTTTTGAACAGGCCTCTGGAAAGTTAATTCTCATGATTATTTCAGAAAATTCCACTTGTGA TGGCTGGCCGTAG
Protein sequence (LotjaGi2g1v0441900.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MASSRVSTITKLTTSSPPYLNSPHFLPPPLNNKVSFQKTQNGGSSTMLPKAVLVTGGAGYIGSHTVLQLLLGGFKTVIVD NLDNSSDVAVNRVKELAGEFGNNLFFHKVDLRDRAALEQIFVSTKFDAVIHFAGLKAVGESVQKPLLYYNNSLIGTITLL EVMAAHGCKKLVFSSSATVYGWPKEVPCTEESPISAMNPYGRTKLIIEEICRDVHRSDPDWKMILLRYFNPVGAHPSGHI GEDPRGIPNNLMPFVQQVAVGRRPALTVFGNDYNTIDGTGVRDYIHVVDLADGHIAALLKLEESDIGCEVYNLGTGKGTS VLEMVKAFEQASGKLILMIISENSTCDGWP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 20 | 20 | - | – | |
| MobiDBLite | 1 | 22 | 22 | - | – | |
| SUPERFAMILY | 47 | 335 | 289 | 8.21E-81 | ||
| PANTHER | 47 | 343 | 297 | 6.1E-179 | – | |
| PANTHER | 47 | 343 | 297 | 6.1E-179 | – | |
| CDD | 51 | 340 | 290 | 1.13499E-173 | ||
| TIGRFAM | 51 | 343 | 293 | 3.7E-114 | ||
| Gene3D | 52 | 326 | 275 | 1.2E-123 | – | |
| Pfam | 53 | 291 | 239 | 2.0E-56 | ||
| Gene3D | 245 | 345 | 101 | 1.2E-123 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | UDP-glucose 4-epimerase activity | Catalysis of the reaction: UDP-glucose = UDP-galactose. | ||
| Biological process | Galactose metabolic process | The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose. |
Expression pattern of LotjaGi2g1v0441900.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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