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LotjaGi2g1v0441900.2

Overview

Field Value
Gene ID LotjaGi2g1v0441900
Transcript ID LotjaGi2g1v0441900.2
Related isoforms 2
Lotus japonicus genome version Gifu v1.2
Description UDP-glucose 4-epimerase; TAIR: AT4G10960.1 UDP-D-glucose/UDP-D-galactose 4-epimerase 5; Swiss-Prot: sp|O65781|GALE2_CYATE UDP-glucose 4-epimerase GEPI48; TrEMBL-Plants: tr|A0A0L9TAX6|A0A0L9TAX6_PHAAN Uncharacterized protein; Found in the gene: LotjaGi2g1v0441900
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr2:93797309..93801694) extracted from Lotus japonicus Gifu genome v1.2.

CTCCTTCTTCGGAGTAGTCATGGCTTCCTCGCGCGTCAGCACCATCACCAAACTCACCACCTCTTCTCCACCATACTTAA ACTCCCCTCACTTTCTGCCACCGCCACTAAACAACAAGGTTTCTTTCCAGAAAACTCAAAACGGTGGTTCTTCAACCATG CTCCCCAAAGCGGTGCTGGTGACCGGTGGAGCCGGTTACATCGGTAGTCACACCGTTCTTCAGCTCCTGCTCGGCGGTTT CAAAACCGTCATCGTCGATAACCTTGACAATTCCTCCGATGTTGCAGTCAACAGGGTCAAGGAGCTCGCCGGAGAATTTG GGAATAATCTCTTCTTTCACAAGGTGCTCTTTCTTTCACGCGCTTTGTTCAATTTCGATTGGTTGCATTACTTCACCGTT GTCAAAATTTGATCTTGTTTTCCCGAAATTGTTAATTTTAGGGATTTAGGTTTCAGTATTACACTATTACTGCTTGCTGT TTCTAATTTTGTAATTAGTCTAGAGTAAATTCGTGAAATTTAGTAATTGGGTGGGTCCAGAAAAGGTAAAGATTTATGCT TTGTGTCGGTAGACGGTGACAGGTTAAAAATTGTGTGTGTTTAAGAATAATTGGATTTGGTGCTTTGTCTGTTTCAAATT AATTCGAAAAGTTGCATGGTGTAGTTTTTGATGTGATGTAATTTTCGGGGAATGGCTGGTTTATTTTGCTGTTAGATCTA AGCTTGTTATATTGCTTTCTATGATGTTTGATTTGATTAACAATTTTGAAAATTTTCATATTTTTTTCCTCTTTTATAAG CCTAAGTTGTTGACCCCCCATCTTTCATGGTTTTTGACTCAATTGTGATGGTTTCTTTTGCATTTAGAACACAAATTTGT TTGCTGTTAGTTTGCAGGCTATGGTTATGATACTTATGTATGAATTCAGTTCGGTTATCTACCCATGTCTTGTTTTTAAT TTTTAAATATTCTAGCAGAGGCAATCATAGATGCCAGACACTTCAATTACTTAATTTTACATTACATGTGGTCTAAGTGA ATGCAATCAGTTTATGATATGGTATGACCCTTCATTATATGTTACTCATTGCAGGTTGACCTCCGGGACAGAGCTGCGCT GGAGCAGATTTTTGTTTCCACAAAGTAAGGATTATGACAGAAGCTTCTTTATTTATTTCTTTTTTCTCAGTGCTCTGGAG TGTATGACAGAAGTTTCTGTAATAATTACAAAAAAGATTCGTTGGGGCCTGATGTTCTCTTATAGTTGTAAATAATCATT GATCTCATAACTGTTTCTTATCACTTTTTTCTTTTCTTGTAGGTTTGATGCAGTCATACATTTTGCTGGACTGAAAGCGG TAGGTGAAAGTGTACAGAAACCATTACTATACTACAACAACAGCTTGATTGGGACAATCACTCTATTGGAAGTCATGGCT GCCCATGGATGCAAGAAGGTAAATTACTACTTACATTATCGACTTTCACTACATATAGAGAATATTCTCGACTTCTTTGC CACTGTTATGTGTTTTGCCTCTTCCTATCTGTCGAGTAAAGTCCCTTCTTATTGCTTGGGGTGCAAACATATCTATTAAC TAATTGAATTCCCTTAAGTATTGCTTGTATATCATTTAAATTTCAGTGGAATAATTGGTTCCAACAGCCATGATAGAATA TTGATGGGCTCTAGTTATTGCTTCTGCTGCTACAACTTCTGTTATTTTTTGGAGGATGCTTATTCTCCTCATGTTCGCTA GAAAGTTCATTTGAGGGGAAAAAGGTGTAGCCCCTTGTTAAGTCTCAAAATGAACTTGGTGGTCCTTAATGTGTTACTGT CATAGACTCATAGTCATTTAGTTGTGATAGTGAGGAAGTGCTTAGCATTTAGATTACCATTGTTTTTTGACACATAACTT CCTTGAAGTGTGTTGTGACTTGTGAGGGAAGGTTGGTTATGCATTTTATTGCCTTCATGCTTACATTTTGCTTATTTCGC TGATTTTGCATTTGATTGGTTTCAGCTTGTGTTCTCATCTTCAGCCACTGTGTACGGTTGGCCAAAGGAGGTTCCATGTA CAGAAGAGTCCCCTATATCAGCAATGAACCCATATGGACGAACTAAGGTATGATTAGGAAACTGTTAAGGGTATTTGTTA GAAGGTGAACCTGGGTTTGATTCAAACTATTTGTCTCTTCTAGCTAGTCTTGGTCTCTTGGGTCTTTGTACAAAACATCT TCTACAAAGTTGATAAGTTCCTTGTAATTTTCTTCTTTGTTGTCTTAATAACTTTCTCCCTTTTTTCAAAAAGAAAATAA ATCTTAACTATTAATATGTCAATGCTTGCATTGGAATCTTGCAATGATATCTGGTAACATGTTTGTCTTTTTAGCTTATC ATTGAAGAAATTTGTCGTGATGTCCACCGTTCAGATCCAGACTGGAAAATGATATTATTAAGATACTTCAACCCAGTGGG TGCACACCCTAGTGGTCATATTGGGGAGGATCCTCGCGGAATTCCGAACAATCTCATGCCATTTGTTCAGCAAGTAGCAG TTGGCAGACGGCCTGCACTGACAGTTTTTGGAAATGATTATAATACTATTGATGGCACTGGGGTATGATCTCACAAACTT TGGCTTTTGCACTGAAATGTTTTCTTGGAAAACGAAACTTGCATTGAGTTTTAGCAAAATCTCACACTACCTACCATTTT CCTTTGATTTGGAATATTTCGATTCTTATCTTTATATATGATGCACACATCCTGACCTACCTTAACTACGGGTCATTTCA TGTGCACAATGTCTCTCTGTCTCCCTCCCCATTTGAATTCGCTTGATAGAATGTTTGCTTGAGCTTACTGACTTCCCTTA GTGAATGATTTTTGTTGAGTGCATGCATTTATTTCCCATTTTTTGAAGATCTACTTGCGATTTCTTCATCAAGGATCTTA CTGGATGGTTCTTACCCTAATTTCAGGTTCGGGATTACATTCATGTTGTTGATCTAGCAGATGGGCACATTGCTGCACTG CTTAAACTAGAAGAATCTGATATAGGTATGATTCAAAATTTATCATTATCTTCTAATATTTATCCGTGTCAGGTTTCAGT GGAAATGTGGTCAATTTACAGGGGCAATATTTTTAGCCTTTACTATTTGTGGTGTGTATGTGTGTAATGCAGGTTGTGAG GTTTATAACTTGGGAACAGGAAAGGGAACCTCAGTTTTGGAGATGGTTAAAGCTTTTGAACAGGCCTCTGGAAAGGTTAT AGACTAAAATTTCTTGCTCTGGCCCCATATCTGTCATCATAATCATTGCTGTCAACTACACTGCCGTTTATTGTTTGAGA AAAATGTTGCTCACATGCCTTTTTTTCCTTCTTGGGGATGGGCTGTTCTGAATTTTAATTTTGCTGAGAATGTAGTGCTT CATGTGCATTCTCAGCGTAGTTTTGTGGCGTGTACTCAGCAACCGAATCATCTTGCAGTTAAGTGTTACCCTGCTTGGGT CCTAAGATAAAACTGGGATTGAATATGAATTGATCTAACTTTAGTTGAGGATCTGTAGCTTGTCTAAGTTAAATTGGTTA CCCTAATTGCCACCCTTTGCTGTATGGAATATGGAGTTCTAGAGAGACATGAGAAGTGGCGACAGAGTGTTCTAAGAAAA ACAATCATCCTAAGATTCTGTCTATCCAACTTATCTTTAGTTTTAAATTTAATGTTTCTTTTGGCTATATTCCTAAGATC TTGAACTTCTTGAGCCACATCATATATATTATTGAGCTATTCTACGATGCACTAATAGTTAATTCTCATGATTATTTCAG AAAATTCCACTTGTGATGGCTGGCCGTAGACCTGGTGATGCTGGAATTGTTTATGCATCAACAGATAAAGCAGAAAGGGA ACTTAAGTGGAAGTAAGTGTTAAATTTTCTTCAAATGGATGGAATTCATGACATATAGGATATAGCTGATTAGGCTTTGC TTTCTAATTTCTTGTTTGGAGTGGACATCACCATCAAGTTAATAATAATCATAATCCTCCTCTTCCTGAATATCATATCC AGGCATTAATTGCACATTGGCACGTATATCTCAGTTTCTTCCAATTTACAACTATTATATCATGTAACATTTACACATTG ATAACTTCTGGGTGAGGTTTTGTGGAGTTCTTTTTTGTTTTTCTCTAAAATATTTATCTTATGTGACAGGGCAAAATATG GAATTGAAGAGATGTGCCGTGATCAATGGAATTGGGCTAACAAAAACCCCTTTGGCTATGCATCTCAGGATTGAGCCGAT TAACGTTGACAATTATCACCTATATATTATATATATGTTCTCTTTTGGGTTCTTTCTCAGGTTTGA
Download Genomic Sequence

CDS sequence (LotjaGi2g1v0441900.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCTTCCTCGCGCGTCAGCACCATCACCAAACTCACCACCTCTTCTCCACCATACTTAAACTCCCCTCACTTTCTGCC ACCGCCACTAAACAACAAGGTTTCTTTCCAGAAAACTCAAAACGGTGGTTCTTCAACCATGCTCCCCAAAGCGGTGCTGG TGACCGGTGGAGCCGGTTACATCGGTAGTCACACCGTTCTTCAGCTCCTGCTCGGCGGTTTCAAAACCGTCATCGTCGAT AACCTTGACAATTCCTCCGATGTTGCAGTCAACAGGGTCAAGGAGCTCGCCGGAGAATTTGGGAATAATCTCTTCTTTCA CAAGGTTGACCTCCGGGACAGAGCTGCGCTGGAGCAGATTTTTGTTTCCACAAAGTTTGATGCAGTCATACATTTTGCTG GACTGAAAGCGGTAGGTGAAAGTGTACAGAAACCATTACTATACTACAACAACAGCTTGATTGGGACAATCACTCTATTG GAAGTCATGGCTGCCCATGGATGCAAGAAGCTTGTGTTCTCATCTTCAGCCACTGTGTACGGTTGGCCAAAGGAGGTTCC ATGTACAGAAGAGTCCCCTATATCAGCAATGAACCCATATGGACGAACTAAGCTTATCATTGAAGAAATTTGTCGTGATG TCCACCGTTCAGATCCAGACTGGAAAATGATATTATTAAGATACTTCAACCCAGTGGGTGCACACCCTAGTGGTCATATT GGGGAGGATCCTCGCGGAATTCCGAACAATCTCATGCCATTTGTTCAGCAAGTAGCAGTTGGCAGACGGCCTGCACTGAC AGTTTTTGGAAATGATTATAATACTATTGATGGCACTGGGGTTCGGGATTACATTCATGTTGTTGATCTAGCAGATGGGC ACATTGCTGCACTGCTTAAACTAGAAGAATCTGATATAGGTTGTGAGGTTTATAACTTGGGAACAGGAAAGGGAACCTCA GTTTTGGAGATGGTTAAAGCTTTTGAACAGGCCTCTGGAAAGAAAATTCCACTTGTGATGGCTGGCCGTAGACCTGGTGA TGCTGGAATTGTTTATGCATCAACAGATAAAGCAGAAAGGGAACTTAAGTGGAAGGCAAAATATGGAATTGAAGAGATGT GCCGTGATCAATGGAATTGGGCTAACAAAAACCCCTTTGGCTATGCATCTCAGGATTGA
Download CDS Sequence

Protein sequence (LotjaGi2g1v0441900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MASSRVSTITKLTTSSPPYLNSPHFLPPPLNNKVSFQKTQNGGSSTMLPKAVLVTGGAGYIGSHTVLQLLLGGFKTVIVD NLDNSSDVAVNRVKELAGEFGNNLFFHKVDLRDRAALEQIFVSTKFDAVIHFAGLKAVGESVQKPLLYYNNSLIGTITLL EVMAAHGCKKLVFSSSATVYGWPKEVPCTEESPISAMNPYGRTKLIIEEICRDVHRSDPDWKMILLRYFNPVGAHPSGHI GEDPRGIPNNLMPFVQQVAVGRRPALTVFGNDYNTIDGTGVRDYIHVVDLADGHIAALLKLEESDIGCEVYNLGTGKGTS VLEMVKAFEQASGKKIPLVMAGRRPGDAGIVYASTDKAERELKWKAKYGIEEMCRDQWNWANKNPFGYASQD
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

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Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
MobiDBLite
mobidb-lite
1 22 22 - –
MobiDBLite
mobidb-lite
1 20 20 - –
SUPERFAMILY
SSF51735
47 387 341 1.15E-96
IPR036291
PANTHER
PTHR43725
47 390 344 1.8E-214 –
PANTHER
PTHR43725:SF17
47 390 344 1.8E-214 –
CDD
cd05247
51 380 330 0.0
IPR005886
TIGRFAM
TIGR01179
51 385 335 1.7E-130
IPR005886
Gene3D
G3DSA:3.40.50.720
52 326 275 1.9E-144 –
Pfam
PF16363
53 376 324 6.6E-66
IPR016040
PRINTS
PR01713
78 94 17 7.1E-5 –
Gene3D
G3DSA:3.90.25.10
245 381 137 1.9E-144 –
PRINTS
PR01713
282 297 16 7.1E-5 –
PRINTS
PR01713
308 323 16 7.1E-5 –
PRINTS
PR01713
347 364 18 7.1E-5 –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003978
Molecular function UDP-glucose 4-epimerase activity Catalysis of the reaction: UDP-glucose = UDP-galactose.
Subterm of
GO:0006012
Biological process Galactose metabolic process The chemical reactions and pathways involving galactose, the aldohexose galacto-hexose. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi2g1v0441900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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