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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0445100 |
| Transcript ID | LotjaGi2g1v0445100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Light-mediated development protein DET1; TAIR: AT4G10180.1 light-mediated development protein 1 / deetiolated1 (DET1); Swiss-Prot: sp|Q9ZNU6|DET1_SOLLC Light-mediated development protein DET1; TrEMBL-Plants: tr|A0A151SCZ6|A0A151SCZ6_CAJCA Light-mediated development protein DET1; Found in the gene: LotjaGi2g1v0445100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94032210..94037180) extracted from Lotus japonicus Gifu genome v1.2.
ATGTTTTTTATGTTGAAACTTGAAATACAAAAGTGTATTTGGAGTGCCATTGTGGAAAATATGCTTTTCTGAGAAATTTG TAAAATTGGTGTCTTGTTCCTTTGTTGAAGGAACCTGAATTGAATTTAATTTTTGCAGGTGTAATTTACTTCTTGCAGGT TCATCATGCTCGCAAATTCTATGAAAACTTAGTACCTAGTTACACAGTCTATGAGGTTGAGTGCCCGGACCATTCGTTTC GTAAATTCACAGATGATGGTCAATACCTTATAAGTTTCAGCAGAAATCATCAAGAGTTGATTGTTTATAGGCCTAGGTGG CTTTCCTTTTCATGCAAAGATGAAGATTGTGACCAGCATGATTTGCCATCAAAAGCAAAGAGATTTGATAGTTTTTTCAC TCAATTATATTGTGTGCCTCTTGCCTCTTGCAATGAACTTATATGTAAAGATTTTTTTCTTTACATGGAGAGTAATCAAT TTGGACTGTTTGCTACTTCTACTGCCCAAATACATGATGCGCCTGCTGTTGGAGGAGCTGTCCAGGGTGTTCCTTCAATT GAAAAGATAACTTTTCACCTCTTGAGGTGCTTTTCTTTATATTCAATTTTTTCATTTTCAGATCTTCAAAATCATATCAG CAATCATATTCTGGTTATTTTGTACTTATGTCATTTTCCCCCTGATTTCTCACCTATTATACTTAGATTGGAAGATGGAT CAATCCTGGATAAGAAGGTCTTCTGTAATGACTTTGTTAATTTGACTCATAATATGGGGGTCTTCTTGTATGATGACCTA CTGGCAATTGTATCACTTCGCTATCAAACCATACACATTCTTCAAATTAGGGACTCTGGAAACCTTGTAGATGTACGTGC TATTGGGGAATTCTGCCGTGAAGATGATGAACTTTTTCTCAACTCAAATGCTCAGGTCTGCAAGCTTTTGGTTGGCTTTA TTCTACAAACGTTATGTTACATGCGCCTTTAGATGAATTATTGAGGCTTTTTAACAGAAAAAACTACAATTTTTTCCGGA CTTAATATGCTATGCCGTTAAAAATTAATAGGGAGGCTTAATATCACACATAATCTGATGGTTTTGTGGCATATTTAAAG CACTACACTTATCAAAGACAGTCATTTTCTGACAGTACATGGCATTGTCTGACAAAAACCAACAGCATCAGTTGCCTGGG AACCACACAGAAAATAACATACATCAAGATCAAGGCCAGCCTAATCTGGGGAGGTCTTTTCTAAGTGGTATAAAGCAGCG ATTGCTTTCATTCATATTCCAGGGACTATGGAATGAAGAAAGAGATGATACCTTGGTTAGTATTCTAAGCAGCAATACAT TTTGAATAAAATCAATTACTATATGAGTGTGTAAGTAATTATTATTAGATAAATACTTATTATATAATGTTCACACTCAC CGTCCCTTCTAATTACTGCTTAGCAATTTTTTCCGTGTTGAATTTCTTTTTGATTTTTTGTATCTTTCAAATTCTAACTT CTTTTATTATGCATAAATTCATTGTTTTAATTTATTCTACTTTTTAACCTGATTCACCAGAGGGTCCAAGGACTAAGGAA GAAGTTTTATTTCCACTTTCAAGATTATGTTGATTTGATTATCTGGAAGGTGGGTTCTTTGACACATTTTATGCATTCTG AGTGCTTCTATCTCAGCTTTATCATCAGACAAAATCATTTCCCTAATGGTTTAAATCTTCTTTACATTGTAGATTTTTTC CTATGCATATATTAAGGAATGTAACAAGTTGCATCTATTCAACTCCTGGGCAGGTGCAATTCATGGACAGACATCACTTG CTAATCAAGTTTGGTAGTGTAGATGGAGGGGTGAGTTCTCTTTGTATGTCTTTTTTTTATTTGTTATGAGAATTCCTTTT ACAGTCTCTAAGAACAGATGAAAATTACTTTCAAGCAACCTGAGCGTGGCTCAAAGCCTAAACACTTCCTTGTAGTAGAG CTCTAGCTTCCCTGTGGGAGGTTCCTTACTATATAAGGAGAGCCCTGATCGAAAAAAATTTAATTAGAAAGGTTATAATT GAACTGGTACAAAAAAAAGAAGTGATTTTATTTAAGAGACCCAAATTTTCCAATCTGCTCCAATGTGGACAGATTTTAAA CAGGGCAGAGAAACGAATACAACTGCTGAGTGTTTTGACTTTTGAGAGCCTCAGCTTCTCTCCTAATCTCCAATTTTACA GTCCAATACCCTAGCAACATTTCTTACTTCCTTTTATTTTTACTAACAATCTACCCCTTTTTCCTGTAACCACTAACTAA CAGTCACACTCATTTAATTAGCTTTACAAAAACAACTCAGTTAAGGGTCGCAAATCCCCTATAACTCTCCTACGCCTTCT CTGATAGACTTTTCTAATTGGAGATCTATTACTAATACATTAATTCTTCTCAAATCTTAAGCTGGTAGCTGAAATGGTAA TTATCTTTTGACAAGCCCCCTCAAAACATAGTTTGGCTAAACTGTTGCTGAAATTTAATATAATTTATCAGGGCAACAAG GATTGAACTCTGATCACTAGGTCTTAGATATTTCATACCAATACCATGTTAGGGACAAACTCTTAAAGGCTTACAGTTGT TAAGTAGAGGCCCAAGAATGATTTTATCAATGACAATTTGATCAGCCGGTAAAAATGGGGAAGAGCTCATGTTTAGGTAT TCATCTGGTTAAACATCCCTGAAAAGTTCAACCTGGAGACTCCAATTGAGTTATTAGTTCATATTGGTAATATTATATTA TGATGTTTTGATCTTTCACATTTGAAGCCTCAGGTGTCGCGAAATGCTGATCACCACCCAGCTTTTGTTGCTGTGTATAA CATGGATACAACTGAAATTGTATCTTTTTATCAGGTAAATTTTGTTTGTCCTGTGTTTTATTTTCTCAGGCTTTCTCTGT GCTAGAGTCTTGGATTTTTTTTTCTAATTCTTCTTTACATCCTATCAGAATTCAGCAGATGAGCTATACACGTTGTTTGA GCAGTTCTGTGACCACTTCCATGCAACGTCAAGGAATTCAATGTATATGAATTTCATATCATCTCATTCAAATAATATTC ATGCACTGGAGCAGCTAAGAAGCATAAAAGATAAGGCAAGCAACTCTTCACAGGTAAAGTGTTGGTTGGTTATAACCTTG TGGTTGCCTGCTCCGTCCCTCCCTCCCCAGAAAAGAAGAAAAATAAAAAAATATAGTCTACATGGTCTGCTAATATGTTG TATGTATAAATTTTGTGTTTTGCAGTTTGTGAAGAAGATGCTTGCCTCTTTGCCTTTCAGTTGTCAGTCACAGAGTCCTT CTCCTTACTTTGACCAATCTCTTTTCCGGTTTGATGATAAGGTTTACTTTTAGTTGTTTTTTTTTCCCTACTTTGCATGC ACCAGCCATAATTTCTTCTTTTTTCCAAAAGAAAATTAAATATTTAGGAAAATGTTAGGTATATGCTGGTTCAAGTGCAG TTTCAGCTGTTAGATTAGTGCTAGTAATACTAAATAGTAAGCTAGTGTTCACGGGGAAACCAATCTTACCTTTTTTGGTG AGAGGCCATAACACCAGTTGCGCTTGTATCATGTCTATCTGAACGCCCGTTTCTTCCAAATTTTGAATTTTAGATTTTAG ATATATGGAAAGAAATTTGAAGCTGAGTTCTTTTGGTGGAGGTGGTGGCAACATTTGCTGCATGATATAGTGATATTGAA AAATGGTATATTGAAAGGATATGGTAACAGTGGCGAGGATTCTATAGGTTGGTTGATTACTGGTAGAGATTCCAATTTTA TTGAAAAAGAAGGATGACTGTAGTTGTGGTTGTCTACTTTGAATTACAGTTGGAAGTATATTTTCTCTGGTTTCCTTACA CTTGTTCTTGTACTGAAAACGATAGGTTTTATTTTCATCAACCAATTTCATAGAACACTTGATGCACAATTTTCACCAAT CAACTAGATTTTTCCCTTAATATGGATTATATTTTTAATTATTCCCAATATTGCAGCTGATTTCTGCAACAGATCGGCAT AGGCAATCAACTGACCATCCAATCAAGTTCATTTTAAGGAAACCTCCGTATTCTCTCAAATTTAAGATTAAGCCAGGTAC GTTTTTTTCCCCTTGTTCAATCTTATTGGCTTCTAAAAGATGAATGGCGGGATCATGCTTTTCTAATGTGAGGATGCAAA AGAGAGTGAAATGCAAGTGGCAAAAATCATAGTATCAAACAATGTTTTTTGTAGAATACAAATTGGATAACCAACTATAG ATTTGGGAGAGCCTATAATCACTAATCACTATAGGCTCTCACAAATCTTTTTTGTAGTGATTAGTGATTCCTCCCAACTT TTTTTTTCTTTTTTTCTTTTTAAATATATCTATTATCTATTACTTTCTTTGATGCGGAGTAATGTTCTATTTGATATGCT GCTATGATAGTTTTCTTGCATTAGTTATCTGATCAGTAATCCACGCAAGATGCAACTTTGATCTGTTTTTTGAACATGAA TTTAGCAGACTTTATTTCGTGCTTTAAATTTATTTTTTGTTATTTAGGTCCTGAAGCTGGTAGTATGGATGGTCGTGCAA AAAAGATCTCTTCGTTTCTTTTTCATCCAATTTTGCCCCTTGCTCTATCTGTTCAACAGACTCTGTTCTTGCAGCCTTCA GTTGTAAATATTCACTTTCGAAGATGAGCGTAGATTTGTTCGTCTTCCTATGTAAACTGTTTCCAATGGGATCAAGAGAA ATTTTATTCTGCCGGTACTTTCAAAATGTATGTCTGTTTTATGTTTTAGTGAATTTTATTTTAAAAATTGATTATTCGTA TGTATATGCTATTTGCTAGGCGAACATTACATCATGAATTTGGCTCCTCTAACTCTAAAGTGTAAAGTAAGTCATTGCAG CCGTTTATTGA
CDS sequence (LotjaGi2g1v0445100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTTTTTTATGTTGAAACTTGAAATACAAAAGTGTATTTGGAGTGCCATTGTGGAAAGTGTAATTTACTTCTTGCAGGT TCATCATGCTCGCAAATTCTATGAAAACTTAGTACCTAGTTACACAGTCTATGAGGTTGAGTGCCCGGACCATTCGTTTC GTAAATTCACAGATGATGGTCAATACCTTATAAGTTTCAGCAGAAATCATCAAGAGTTGATTGTTTATAGGCCTAGGTGG CTTTCCTTTTCATGCAAAGATGAAGATTGTGACCAGCATGATTTGCCATCAAAAGCAAAGAGATTTGATAGTTTTTTCAC TCAATTATATTGTGTGCCTCTTGCCTCTTGCAATGAACTTATATGTAAAGATTTTTTTCTTTACATGGAGAGTAATCAAT TTGGACTGTTTGCTACTTCTACTGCCCAAATACATGATGCGCCTGCTGTTGGAGGAGCTGTCCAGGGTGTTCCTTCAATT GAAAAGATAACTTTTCACCTCTTGAGATTGGAAGATGGATCAATCCTGGATAAGAAGGTCTTCTGTAATGACTTTGTTAA TTTGACTCATAATATGGGGGTCTTCTTGTATGATGACCTACTGGCAATTGTATCACTTCGCTATCAAACCATACACATTC TTCAAATTAGGGACTCTGGAAACCTTGTAGATGTACGTGCTATTGGGGAATTCTGCCGTGAAGATGATGAACTTTTTCTC AACTCAAATGCTCAGTACATGGCATTGTCTGACAAAAACCAACAGCATCAGTTGCCTGGGAACCACACAGAAAATAACAT ACATCAAGATCAAGGCCAGCCTAATCTGGGGAGGTCTTTTCTAAGTGGTATAAAGCAGCGATTGCTTTCATTCATATTCC AGGGACTATGGAATGAAGAAAGAGATGATACCTTGAGGGTCCAAGGACTAAGGAAGAAGTTTTATTTCCACTTTCAAGAT TATGTTGATTTGATTATCTGGAAGGTGCAATTCATGGACAGACATCACTTGCTAATCAAGTTTGGTAGTGTAGATGGAGG GCCTCAGGTGTCGCGAAATGCTGATCACCACCCAGCTTTTGTTGCTGTGTATAACATGGATACAACTGAAATTGTATCTT TTTATCAGAATTCAGCAGATGAGCTATACACGTTGTTTGAGCAGTTCTGTGACCACTTCCATGCAACGTCAAGGAATTCA ATGTATATGAATTTCATATCATCTCATTCAAATAATATTCATGCACTGGAGCAGCTAAGAAGCATAAAAGATAAGGCAAG CAACTCTTCACAGTTTGTGAAGAAGATGCTTGCCTCTTTGCCTTTCAGTTGTCAGTCACAGAGTCCTTCTCCTTACTTTG ACCAATCTCTTTTCCGGTTTGATGATAAGCTGATTTCTGCAACAGATCGGCATAGGCAATCAACTGACCATCCAATCAAG TTCATTTTAAGGAAACCTCCGTATTCTCTCAAATTTAAGATTAAGCCAGGTCCTGAAGCTGGTAGTATGGATGGTCGTGC AAAAAAGATCTCTTCGTTTCTTTTTCATCCAATTTTGCCCCTTGCTCTATCTGTTCAACAGACTCTGTTCTTGCAGCCTT CAGTTGCGAACATTACATCATGA
Protein sequence (LotjaGi2g1v0445100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MFFMLKLEIQKCIWSAIVESVIYFLQVHHARKFYENLVPSYTVYEVECPDHSFRKFTDDGQYLISFSRNHQELIVYRPRW LSFSCKDEDCDQHDLPSKAKRFDSFFTQLYCVPLASCNELICKDFFLYMESNQFGLFATSTAQIHDAPAVGGAVQGVPSI EKITFHLLRLEDGSILDKKVFCNDFVNLTHNMGVFLYDDLLAIVSLRYQTIHILQIRDSGNLVDVRAIGEFCREDDELFL NSNAQYMALSDKNQQHQLPGNHTENNIHQDQGQPNLGRSFLSGIKQRLLSFIFQGLWNEERDDTLRVQGLRKKFYFHFQD YVDLIIWKVQFMDRHHLLIKFGSVDGGPQVSRNADHHPAFVAVYNMDTTEIVSFYQNSADELYTLFEQFCDHFHATSRNS MYMNFISSHSNNIHALEQLRSIKDKASNSSQFVKKMLASLPFSCQSQSPSPYFDQSLFRFDDKLISATDRHRQSTDHPIK FILRKPPYSLKFKIKPGPEAGSMDGRAKKISSFLFHPILPLALSVQQTLFLQPSVANITS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 25 | 538 | 514 | 2.0E-225 | ||
| Pfam | 123 | 538 | 416 | 3.6E-146 | ||
| SUPERFAMILY | 293 | 457 | 165 | 2.11E-5 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi2g1v0445100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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