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| Field | Value |
|---|---|
| Gene ID | LotjaGi2g1v0455300 |
| Transcript ID | LotjaGi2g1v0455300.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Cysteine synthase; TAIR: AT4G14880.1 O-acetylserine (thiol) lyase (OAS-TL) isoform A1; Swiss-Prot: sp|Q43317|CYSK_CITLA Cysteine synthase; TrEMBL-Plants: tr|A0A0L9TAD9|A0A0L9TAD9_PHAAN Cysteine synthase; Found in the gene: LotjaGi2g1v0455300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr2:94838209..94846987) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGCTTGAAAGGTCTGGAATCGCTGAAGATGTTACACAAGTCAGTTTCTGTACCTTAACACCCATTTCTATATGATT TTTCTTACTCTGTTGTTAGTCAGTCATAGTGTTCATTGGTAGATTCTATAATGTTGTCATATTTGTTCTCTGTAGTTGAT TGGCAAAACCCCATTAGTATATCTAAATAAACTTGCTGATGGTTGTGTTGCCCGAGTCGCCGCCAAGCTGGAATTGATGG AGCCATGCTCTAGTGTAAAGGACAGGTAGGTACCTATTTTTTGATTCTCAATTTTTGTTCATGCGTTTCGTAGGTTATGT TCTGCCTTGTTCTTTTGTTCTTATGGTTTAAATTTGACATGCAGGATTGGCTATAGTATGATTGCTGATGCAGAAGAGAA GGGACTTATCACACCTGGAAAGGTTGGTATACGTTGTTTCGGATGTTAGTAGTTAACTAGTTATCATGATTAACTTGTTT GTATGAATGTGCGTGAATCCTGAAATACTAGTTAATTAAAATATTCCATGTAATAGATATTCAGGAGCAGGATAACTAGT TAAATCATATGCACATGCGGGAACATCCTATATGGGAGGTTTGGCCCAAATTTAAATAAAACGTCAAGTTCTGCTATAAA ATAATTACATGACGGTGTTACTCTCCTTGCAGTTACTTTAGATTTTAGACCTTAATGGATACACTGTTAATTGACTGCTG ATATGTATAATAATTTGAAGTGGTAAGGAGAAGAAAGTAGATCTGCTTCTTTAGTGTATATCTCAGCTGACAATTATACT TTTTTCTGCATGTGTGTTTCTCATGTGTTCTACAGAGTGTTCTCATTGAACCAACTAGCGGTAATACTGGAATTGGATTA GCCTTCATGGCAGCAGCTAAGGGTTACAAGCTCATAATTACGATGCCTGCTTCAATGAGTCTTGAAAGAAGAACCATTCT ATTAGCTTTTGGAGCTGAGTTGGTTCTTACTGACCCTGCAAAAGGAATGAAAGGAGCTGTTCAGAAAGCTGAAGAGATAG TGGCTAAGACTCCTAACTCCTACATGCTTCAGCAATTTGAAAACGCTGCCAATCCCAAGGTATATAAGCAAATTAATCAT GTAACTAGTGTAATGGATTCTTGACACTTGCGCAATATACATATTGTTATCATTGCAGGTACACTATGAAACCACTGGTC CAGAGATATGGAAAGGCACAGCTGGTAAAGTTGATGCACTTGTTTCTGGGGTAGGTACTGGTGGTACCATAACAGGTGCC GGGAAATATCTTAAAGAGCAGAATTCCAATATAAAGGTTAGCTTTTTGCTTCCTAAATATATGCTTATATAAATTTATCG CTACTTAACAAGAATTTTCCTGAAAATAAAGATAACCTATTTCCACTATAGCTATGTCATTCTTTCTATATGTTCTCAGT GTCTTTTCCCATTATGCAGATGATTGCTGTGGAACCAGTTGAAAGTCCAGTGCTCTCAGGAGGAAAGCCTGGTGAGTTAT GACCTCTTCAGTGATAATGTTGTTCTTCAGTAATTTTCCATTGAGCTGTAAAATTCTTACAGTAGAAGCTGATATTTTAT TTTATTTTATTTTCTATCAATCTGTTTCTCGGTGTCTGAGAGCTTTAAGGATGAAGGGAAGATAGTCTAATTAAAAGGGG TAGAGGAAGACTTAAAAAAACTACAGCAGAAACCAGTTGAAGTAGGAAAAAGAAAAACATATCTTCTTGGTTTTACTGGA ATTTTGGTTTTTGATAGAAACACCATCAACTCTTAGTGAAGCTGACTCTACCCAATGGGTTAAAGCATGCTCATTTTCCA TGTTAAAGCTATTGGCTGGCATTAGACCAATGATTGCATTGGAGCCTTGGAGGTATTATTAAATAATACCCAAACCCACT TCCTTCTTACCGTCCAGGAAGGACCAGGTTTTGTCTACCTGTCCATGTTACTAAAAGTAGATTATCACTAGGTTTTCTTT ACAATGAAGCATTCGTTGTATCTTTTCTTGTGAATTTTTTTCGATACCATTTCATGACTAATCTTATACAAAACATGTAA AGCCTGTCACTGAGATTATGCTGTTTTTTGTTCTGCTTAAAATCATCCCTTCAGAGGGTAGTAGACTATATATTAGTTCC TAATTCCTATTTGCTTTTCTTGTTTGTTTTGTTCTCCGGTGGCTGCATGCCTGCAACTAATATAATGTTAACACTTAAGA ATAAAACCTTAAGGTTGAGATGAAGAACTTTCTTTTCCAAGCTGTAGCTAATTTGCAAATTACCTTGTGAATGTCCAGGT CCACACAAGATTCAAGGGATTGGTGCTGGTTTTGTCCCTGGTGTCTTGGATGTCAATCTTCTGGATGAAGTCATTCAAGT AAGCTCTAACAACTTTATGATTTATGATAAAAAAAAAAATTGAAGGTGTTCGGAATGTGCTGTGGAGTTATATATGTGTG TTTATAGTTATTGCATCTGATTGTTGATAGTTGCTTGACATTCTTGCGCCTTCAATACTTCAATATGGATTTGATCTGGC AGTATACTGTCCTATAAATTTGATAACATTAGTACATTTTTAACTTTGACTTAATATCTCATAATTTTGCAACTTTGAAA GTTGCAACGGTTTATGTTTCATTAAACCTGAGATGTGTCTTTTGCAGATATCAAGTGATGAAGCTATAGAAACTGCGAAG CTTCTTGCACTTAAAGAAGGCCTATTCGTAAGTTCTAAACTTATTGAAACAGCCAAGATCGTGCATGATGTTGCCTCTAA CACCTATTTTGTATTATTGCAATTGATATTTGAATTGGATATGGGAACAAATAAGAAAGAACCTAGTAATACCATTTTTT TTTCTAATTGTGTAGTTTATTGATCATGTTTACTCTGGATATTATTGCAGGTGGGAATATCTTCAGGAGCTGCAGCTGCC GCTGCCATTAAGATAGCAAAAAGACCAGAAAATGCTGGAAAACTTATCGTTGTAAGTTAATTGTATCCCTAGATCTACAA AAACTACATTGTATTACAGAGTACAAGTTAAATCAAGGATCATTGAAGACTGATCCTTTATTTTTTATTTTAATATAACA CATTTTGATAAATTGGTGATTACATTCCTCCATATTATTAGTTCCGGTACTCGTACCAACACCATTAACATGTAATATCA AAAAACTGCATTAACACATGATATCAAAGAAATGCATTAACATGTGATATCAAAGAAATGCTGCAGGTAGTATATTAGAG TATACTACTCGTGTTAAGTAAAGCTACTGATTGTAGCTGAGTTAGTGTGTTAGTTATGCTTGCTTAGCTGTCAAGCTTAG CTGGCATAACAGAATTAAGAGTTAGTTGTTAGAGTTTGTTAGAATTGTTAGCTTGTTCATCAAGCTTTATATTCTTCTAT AAGTACTGAACTATGGTCTATTGTATCATAACCTTTGAAATGAATGAGAATTAGATTTACAGAGTTCTGAGTTTTCAACA TGGTATCAAGAGCAGGTCACGATCCTTGAGATCTCTCTCGATTTTCTTTTCTTCTCCTTCTTCTTCGTCATGGCTGACGA AATTCCAGAGATTCCGATCCCGATTCCAGTTCCAGTGGCTCAACCGCAGTTGAGTTCATCCACGCTTGTTCACAAGCTTA CGTTGAAGCTTGATGATACAAATTTTCTTTCATGGAAGCAGCATGTGGAAGGGATCGTTCGCACTCACAGGTTGCAGAGT TTCCTTTCTCATCCTGAGATTCCACCACGATTTCTCACTGAAGAAGATCGTGTGAATGCAGTGGAGAATCCTGCATATCA AGTCTGGGAGCAGCAAGATTCTGCTCTGTTTACGTGGTTACTTTCTTCGCTTTCACCATCAGTGCTTCCTACTGTGGTGA ATTGCTCTCAGTCCTGGCAAGTCTGGGAAGCAGTGCTCGAATTCTTCCACGCACACGCTCTCGCGCAGTCCACACAACTG AGATCTGAGATTCGATCCATCTCCAAGGGATCGAAGTCGTGTTCTGAGTATCTCAAGCGTATTAAGTCGATTGTTAATGC GCTAATCACGATTGGAGATCCAATCTCCTATCGTGAACACTTGGAAGCAGTGTTTGATGGCTTGCCTGAGGAATACAGTC ATCTTCAAACGATTGTGTACAATCGTGAATCACCGAGTTCGATTTCGCAGGTTGAAGCGATGATTATCGCACATGAAGCG CGTCTCGATCACGCTCGTACTCGCCAGATCTCGACAAATCCTCCGTCGGCGCTCCTTACTCAGGCTCCACCGCCACCAGC GACTCAACCTCCGCTGTCGACACCGTCGCCGGTGGCCTCTGAAGCAAATTATGCTTCTGGATCTGTCGATTCTTCCTATA AGGATCGTTCTTATGATGATCGCAGTGATGATCGCACTGGATCCTATGAATCGCGTGGACGTGGTGGCTACACTAGCAAC AATGGTGGAAACAACTCTCGTGGTGGCTACAATGGCCGTGGAGGAGGTAGAGGTAATAATCGCAGCGTTCAGTGTCAGAT TTGTAAGAAGTATGGACATGATGCTACTGTTTGTTACTATCGTGGTTCTTCATCTTCATCCACTCCTTCTTCTGGCATTT CTGGAATGAACTCAGGCTATGGAATGCAATTTCCTAATTTTCCTATGATGCCTATGCCTCAGTTTGGCTTCTCACCTTAC TGTGGATCTCCTCAGTTTGGTTTTCCCACTCAGTTTGGTCAGCAACAACAGTTTGGTCATGGAAATTCATTCTCTGGTTT TCCTTTTGGTCCTCAACAGTTTGGATTTAGTTCCTTTGCTGGTACTCCATGGAGTAATTTTCCTTCTCAGTTCAACAATG GAGGACAGAGGCCTGGAAATTCCATTGCAAGGCCTCCACAAGCTATGCTTACTGGCACATCACAGGCTGGAGGATCTGCT TCAGCAAACCTGAGCACTTGGTTCCCTGATTCTGGTGCTACTCACCATGTGACAAATGACTCCTCAGTCATCTCAGATAG TGTCTCCCTCACTGGTAATGACCACATCTTCATGGGGAATGGACAAGGTTTGCCAATCCTCTCTATAGGATCTGCTTCTT TTCCTTCTCCTTATCATAATACAACCACACTCACTCTTAAAAATCTGCTTCTAGTTCCCAATATCACCAAGAATTTGGTT AGTGTAAGTAAGTTTGCAAGGGACAATCATGTTTATTTTGAATTTCACCCTTCTTTCTGTGTTGTTAAATGTCAGGTCAC ATCTAGAGTTCTTCTTCAAGGTCATGTTGGACCAGATGGCTTGTATGTCTTTGAAGGCATGCATACTCCTTCCCTTTCCA AGACATCTCCTATTCCAGCTTCTGCTTCTTTGTCTCCAGTGGCTGTTTCAGACTCAGTTTCTGCTTTGTCAGCTGCATTA TCTAGCTCTACTACACCTAGTCTTAGTCCTAAGTCTATAGTTTCATCTTCTGCTATTGTAAGCCCAACCTCTTATGGTTT GTGGCATTCTAGATTAGGTCATCCTCATCATGAGGCTTTGCATTTAGCTTTAACCTCTTGTAATATTCAAGTTCCTAATA AAACAAAGTTCAATGTTCGTTCAGCTTGTTGTCTTTCTAAGTCTCATCGCTTGCCATCTCATTCTTCTACTACTGTTTAC TCCTCTCCTCTAGAGCTAATTTTTGCTGATTTATGGGGGCCCTCCTCTATTGAGTCTTCTTGTGGTTTTTCTTATTTTCT TACTTGTGTGGATGCCTTTTCTCGTTTCACATGGATCTTTCCTATGAGAAAGAAATCTGATACTTGTTCCACATTTCTAC AGTTTCAAGCTATGGTAGAATTGAAATTTAGCAAGAAACTTAAGTCTATTCAAACTGACAATGGCACAGAGTTTAAACCC CTTACTTCCTATTTTACAAAGTCAGGGATTGTTCATAGGTTGACATGTCCCTATACACATCACCAAAATGGTAGTGTGGA GAGGAAACATCGCCATATTGTTGAAACTGGCCTTTCCTTGCTAGCACATGCTCATTTGCCATATCAATTTTGGGATCAAG CTTTTCTTGCAGCTGTGTTTCTCATTAACAGATTGCCTACCTCTGTTTTAGGCAATGCAAGTCCTTACCTTAAGCTTTTT AATACACAACCTGATTACAAGCTACTTAGAGTTTTTGGCTGTGCTTGTTACCCACATTTGAGGCCTTACACACAATCCAA GTTGTCTCTGAGGTCTAAGCTTTGTGTGTTCATGGGCTATTCATCACAACATCAAGGTTATAAGTGTATGGACAATGAAG GCAAAATTTATATCTCAAGGGATGTGGTTTTTGATGAATTCAACTTTCCCTATCCACACATGTTCACTTCCTCAGAGGTT CCTCACCCAGATCAAGGGCTTTCTTCTATTATTTCTCTGGTACCAGCTGCTGTTCATGGTCCACCTCAAGCTGTTAATGC TCCTCCACTTTCACCTCCCTCTTCAGGGGACACTCATCCCAGTGGTTTTTCAGTTCAGCAGCAGCCTAGTCACTCACCTA GTCATGGATCATCTTCTGGATCAGCACAGCCAGGTCATAATAATTCTGCAACTTCTTCTTCTACTGGTGCAATTGCTCAG CCCATTGGGAATGTTCATCCCATGCAAACAAGGGCAAAATCTGGTATTGTCATGCCCAGATTATTTCCCACACTTCTCCT AACCCAAGCAGAACCTACAAACTCTACTCAAGCATTAAAGGATCCTAAGTGGAAGGCTGCTATGCAAGCTGAATATGATG CCTTGATGGCCAATGGAACCTGGACTTTGGTTCCACTCCCTAAGGATCGAAAGCCTATTGGCTGCAAATGGGTATTTAGG GTTAAAGAGAATGCTGATGGGACAATTAATAGATACAAAGCAAGGTTGGTGGCCAAAGGATATCACCAAGTGAAAGGGTT TGACTACTCAGAAACTTTTTCTCCAGTGGTAAAGCCAATTACTATTCGCATAATCCTCAGCTTGGCTATCACTAAGAAGT GGCACATTCATCAACTTGATGTGAATAATGCTTTTCTTAATGGGGCACTTCAAGAGGAGGTCTACATGACACAACCCTCT GGTTTTCTTTGTAAAGACAAGTCTTTTGTGTGCAGACTGCACAAGGCTCTCTATGGCCTCAAACAAGCCCCAAGAGCTTG GTTTGAAAGGTTAAGGGCAGCTCTAGTTAAGTATGGTTTCACTCCTAGCAAATGTGATCCTTCCTTGTTCACTTTCTACA CCAAAGGTTGTGTTATCTACATTCTTGTTTATGTAGATGACATTATTATTACTGGGAATTCACTGCCATTAGTTCAACAA GTGGTGAAGAATCTTGATTCAGAATTTTCTTTGAAGCAGTTGGGGCAGCTAGACTATTTCCTAGGTGTTCAAGTTCATCA TTTGAAGGACAGATCCTTACTTCTTACACAAACAAAATACATCAATGATTTGCTTGAGAGAGCAGAAATGGGGGAGGCCA AAGGCATATCTACTCCCATGATTGGAGGTGCTAAGTTGAGCAAATATGGCTCAGATTATTTTGCAGATCCAACATTGTAC AGGTCTATTGTTGGTGCTCTGCAGTATGCTACTTTGACAAGACCAGAGATTAGCTTTGCAGTGAATAAGGTTTGCCAATT CCTCAGCCAGCCCTTGGAGGATCATTGGAAGGCTGTCAAAAGAATACTTAGGTATCTTAAAGGCACCATACATCATGGTC TTCACCTTAGGCCTTGTTCCTTACACACTTCTGTCCCTCTTGTGGCCTTTTGTGATGCTGACTGGGGATCTGACCCTGAT GACAGACGATCAACCTCGGGCACTTGTGTCTTTTTTGGTCCAAATTTGGTCTCTTGGAGCTCCAAGAAACAGACCTTGGT TGCTAGATCTAGCACAGAGGCAGAATATCGCAGCCTGGCCAATACATCAGCAGAATTACTTTGGGTTCAGTCATTATTGC AAGAGCTTCAGGTTCCCTTTTCTCCACCTCGAGTATTTTGTGATAATATGGGTGCAGTTGCTCTCACTCATAATCCTGTT CTTCATACTCGCACCAAACATATGGAGCTTGATATCTTCTTTGTGAGGGAAAAGGTTCTTGACAAGACTCTTTTTGTTCA TCACATTCCTTCTGAAGACCAGATTGCTGACATATTCACCAAAGCTCTTTCCCCTACTAGGTTTGAGTATCTTCGTTCCA AACTCAAGGTGCTTGAGCGGGTTCCTTCTCCCCCACCTTGAGTTTGCAGGGGTGTATTAGAGTATACTACTCGTGTTAAG TAAAGCTACTGATTGTAGCTGAGTTAGTGTGTTAGTTATGCTTGCTTAGCTGTCAAGCTTAGCTGGCATAACAGAATTAA GAGTTAGCTGTTAGAGTTTGTTAGAATTGTTAGCTTGTTCATCAAGCTTTATATTCTTCTATAAGTACTGAACTATGGTC TATTGTATCATAACCTTTGAAATGAATGAGAATTAGATTTACAGAGTTCTGAGTTTTCAACATAGTATAATCCAATGGAA CTAATCTATGTTAATCAGAAATATGATTATGTGGCTTAAGAACTCGCCATTATATTTCATGTATCTGTTTATTTATTTCT GTATGGGGCACTTTTTGAGTTGCTGTTTCATTTGGATATGCTACAGGTTGTTTTTCCAAGCTTTGGTGAGAGGTACCTGT CCTCTGTGCTATTTGAGTCGGTCAGACGAGAAGCTGAAAGCATGACTTTTGAGACCTGA
CDS sequence (LotjaGi2g1v0455300.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGCTTGAAAGGTCTGGAATCGCTGAAGATGTTACACAATTGATTGGCAAAACCCCATTAGTATATCTAAATAAACT TGCTGATGGTTGTGTTGCCCGAGTCGCCGCCAAGCTGGAATTGATGGAGCCATGCTCTAGTGTAAAGGACAGGATTGGCT ATAGTATGATTGCTGATGCAGAAGAGAAGGGACTTATCACACCTGGAAAGAGTGTTCTCATTGAACCAACTAGCGGTAAT ACTGGAATTGGATTAGCCTTCATGGCAGCAGCTAAGGGTTACAAGCTCATAATTACGATGCCTGCTTCAATGAGTCTTGA AAGAAGAACCATTCTATTAGCTTTTGGAGCTGAGTTGGTTCTTACTGACCCTGCAAAAGGAATGAAAGGAGCTGTTCAGA AAGCTGAAGAGATAGTGGCTAAGACTCCTAACTCCTACATGCTTCAGCAATTTGAAAACGCTGCCAATCCCAAGGTACAC TATGAAACCACTGGTCCAGAGATATGGAAAGGCACAGCTGGTAAAGTTGATGCACTTGTTTCTGGGGTAGGTACTGGTGG TACCATAACAGGTGCCGGGAAATATCTTAAAGAGCAGAATTCCAATATAAAGATGATTGCTGTGGAACCAGTTGAAAGTC CAGTGCTCTCAGGAGGAAAGCCTGGTCCACACAAGATTCAAGGGATTGGTGCTGGTTTTGTCCCTGGTGTCTTGGATGTC AATCTTCTGGATGAAGTCATTCAAATATCAAGTGATGAAGCTATAGAAACTGCGAAGCTTCTTGCACTTAAAGAAGGCCT ATTCGTTGTTTTTCCAAGCTTTGGTGAGAGGTACCTGTCCTCTGTGCTATTTGAGTCGGTCAGACGAGAAGCTGAAAGCA TGACTTTTGAGACCTGA
Protein sequence (LotjaGi2g1v0455300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MALERSGIAEDVTQLIGKTPLVYLNKLADGCVARVAAKLELMEPCSSVKDRIGYSMIADAEEKGLITPGKSVLIEPTSGN TGIGLAFMAAAKGYKLIITMPASMSLERRTILLAFGAELVLTDPAKGMKGAVQKAEEIVAKTPNSYMLQQFENAANPKVH YETTGPEIWKGTAGKVDALVSGVGTGGTITGAGKYLKEQNSNIKMIAVEPVESPVLSGGKPGPHKIQGIGAGFVPGVLDV NLLDEVIQISSDEAIETAKLLALKEGLFVVFPSFGERYLSSVLFESVRREAESMTFET
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 269 | 269 | 5.2E-178 | – | |
| PANTHER | 1 | 269 | 269 | 5.2E-178 | – | |
| SUPERFAMILY | 9 | 284 | 276 | 9.56E-89 | ||
| Pfam | 12 | 269 | 258 | 2.3E-61 | ||
| TIGRFAM | 13 | 269 | 257 | 1.5E-122 | ||
| TIGRFAM | 13 | 269 | 257 | 1.7E-116 | ||
| Gene3D | 14 | 269 | 256 | 1.2E-107 | ||
| CDD | 17 | 280 | 264 | 2.1414E-133 | – | |
| ProSitePatterns | 38 | 56 | 19 | - | ||
| Gene3D | 50 | 152 | 103 | 1.2E-107 | ||
| PANTHER | 268 | 296 | 29 | 5.2E-178 | – | |
| PANTHER | 268 | 296 | 29 | 5.2E-178 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Cysteine synthase activity | Catalysis of the reaction: O3-acetyl-L-serine + hydrogen sulfide = L-cysteine + acetate. | ||
| Biological process | Cysteine biosynthetic process from serine | The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine. |
Expression pattern of LotjaGi2g1v0455300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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