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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0057900 |
| Transcript ID | LotjaGi3g1v0057900.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT5G48060.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|K7LB38|K7LB38_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0057900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:6018573..6021116) extracted from Lotus japonicus Gifu genome v1.2.
AGGATTTCGATAAAGAGAAGACCGCGAGTACCACAAGGTACTCCATTAACAATGAACTCAGTTAATCCACAACTTCATGA TCAAAGGTACAATCTCAATAGCACCAACCAACAGCCAAGGATTATATCAGAGACACCAAGACCAGGAAGTCCAATCACAA GGCAGAACCCAGTTAATCTTAATCCCCAAGTCCACACTAACGGCGATGAAAACTACAATCTCAGGGACACCAATCCACAA CTTGGTGGAAGAGGGTGGGGGAGTGGTGGTGAAAGATTCACAAGCACATATGACCTTGTTGAGCAGATGTTTTATCTTTA CGTTCGCGTGGTTAAAGCAAAGAATCTTCCCCCAGGTACCATCACCTCCAGCTGCAGTCCTTATGTGGAAGTGAAGATGG GGAACTACAAAGGGAGAACAAAGCACATGGAGAAGAAATTGAGCCCAGAGTGGAACCAGGTATTTGCTTTCTCCAAGGAC AGCATTCAGTCTTCTTTTCTAGAAGTTTTTGTGAAAGATAAAGAAATGGTGGGTAGAGATGACTATATTGGAAGGGTGAT CTTTGACCTCAATGAGGTTCCAACCAGAGTTCCACCAGATAGTCCTCTGGCTCCTCAATGGTACAGGCTTGAGGACTTAA GAGGGGAAGGCAAGGTCAATGGTGACATAATGCTTGCAGTTTGGATGGGAACACAGGCTGATGATGCTTTCTCAGATGCT TGGCATTCAGATGCTGCCACTGTCTATGGGGAGGGTGTTCTCAATATCAGATCAAAGGTTTATGTCTCTCCAAAACTGTG GTATCTCAGGGTCAATGTAATTGAAGCTCAAGATGTGATCCCCGGTGACAGAAACCGCTTACCGGAGGTTTTTGTGAAAG CTCAAGTGGGCTGCCAAGTGCTGAAGACCAAGATATGCCCCACCAGCACTAGAACAACCACTCCACTTTGGAATGAAGAT TTGGTTTTTGTGGCTGCTGAGCCATTTGAGGAGAAATTGACAATCACTGTGGAGGATCGCGTGCACCCTTCAAAAGATGA GGTGCTTGGGAAGATAAACCTGCCACTGACCCTCTTTGAGAAGAGGCTAGACCACAGGCCGGTTCATTCCCGCTGGTTCA ACCTTGAGAAATTTGGCTTTGGAGGGCTGGAAGGTGATAGGAGGAATGAGCTTAAATTTTCAAGCAGGATTCACCTGAGA GTTTCCCTTGAAGGTGGGTACCATGTCTTAGATGAATCCACTTTGTACATAAGTGATCAAAGACCAACAGCAAGACAGCT ATGGAAGCAGCCTATTGGGATACTTGAAGTAGGCATCTTAGGAGCACAAGGGCTTCTCCCAATGAAGATGAAGGATGGCC ATGGCAGCACAGATGCATACTGTGTTGCCAAGTATGGTCAGAAATGGGTCAGAACCAGAACACTTTTGGACACTTTTAGT CCTAAATGGAATGAGCAATACACATGGGAGGTTTATGATCCTTGCACTGTGATAACATTGGGGGTTTTTGACAATTGCCA TTTAGGTGGAGGTGAAAAAACTCCTGGTGGTAATGGAGCACTAGATTCAAGGATTGGAAAGGTAAGGATTAGGCTATCAA CACTGGAAGCTAATAGGATTTACACCAATTCTTACCCACTTCTTGTTTTGCACCCACATGGAGTTAAGAAGATGGGTGAG CTTCAGCTAGCAGTGAGGTTCACTGCACTCTCATTAGCCAACATGGTTCATATTTATGGCCAACCTTTGCTCCCCAAGAT GCACTACTTGCATCCTTTCACAGTTAACCAAATAGACAGCTTAAGGTACCAAGCCATGAACATTGTAGCTGCGAGGCTCG GCCGAGCTGAACCATCTCTGAGGAAGGAAGTGGTGGAGTACATGTTGGATGTTGATTCCCACATGTGGAGCATGAGAAGA AGCAAAGCTAACTTCTTTCGCATCATGTCGCTTTTATCTGGTTTGATCACCATGGGGAGATGGTTCAGTGATGTTTGCAA TTGGAAGAACCACATCACATCAATTCTAGTTCACATTCTCTTCCTGATACTGATATTCTACCCTGAATTGATCCTGCCAA CTGTGTTTCTCTACATGTTCTTGATTGGTCTTTGGAACTACAGGTTCCGGGCGAAAAACCCATCTCACATGGATACCAAA CTCTCATGGGCAGAAGGTGTTCACCCAGATGAGCTTGATGAGGAGTTTGACACATTCCCCACTTCGAGATCACATGACAT GGTGAGAATGAGGTATGACAGGCTCAGAACTGTTGCAGGGAGGATTCAGACAATTGTGGGGGACATTGCTACTCAAGGGG AGAGATTTCAGTCTTTATTGAGCTGGAGAGACCCCAGAGCAACCAGCATCTTTGTGTTGTTTTGCTTGTGTGCCGCTGTG GTTCTCTACGCCGCGCCATTCAGAGTGGTGGCAATGGTAACAGGCTTGTACCATTTGAGACATCCAAAGTTTAGGAGCAA GCTACCTTCAGTACCAAGTAATTTCTTCAAGAGGCTCCCAGCTAGAACAGATAGTTTGCTGTGA
CDS sequence (LotjaGi3g1v0057900.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACTCAGTTAATCCACAACTTCATGATCAAAGGTACAATCTCAATAGCACCAACCAACAGCCAAGGATTATATCAGA GACACCAAGACCAGGAAGTCCAATCACAAGCAATCCACAACTTGGTGGAAGAGGGTGGGGGAGTGGTGGTGAAAGATTCA CAAGCACATATGACCTTGTTGAGCAGATGTTTTATCTTTACGTTCGCGTGGTTAAAGCAAAGAATCTTCCCCCAGGTACC ATCACCTCCAGCTGCAGTCCTTATGTGGAAGTGAAGATGGGGAACTACAAAGGGAGAACAAAGCACATGGAGAAGAAATT GAGCCCAGAGTGGAACCAGGTATTTGCTTTCTCCAAGGACAGCATTCAGTCTTCTTTTCTAGAAGTTTTTGTGAAAGATA AAGAAATGGTGGGTAGAGATGACTATATTGGAAGGGTGATCTTTGACCTCAATGAGGTTCCAACCAGAGTTCCACCAGAT AGTCCTCTGGCTCCTCAATGGTACAGGCTTGAGGACTTAAGAGGGGAAGGCAAGGTCAATGGTGACATAATGCTTGCAGT TTGGATGGGAACACAGGCTGATGATGCTTTCTCAGATGCTTGGCATTCAGATGCTGCCACTGTCTATGGGGAGGGTGTTC TCAATATCAGATCAAAGGTTTATGTCTCTCCAAAACTGTGGTATCTCAGGGTCAATGTAATTGAAGCTCAAGATGTGATC CCCGGTGACAGAAACCGCTTACCGGAGGTTTTTGTGAAAGCTCAAGTGGGCTGCCAAGTGCTGAAGACCAAGATATGCCC CACCAGCACTAGAACAACCACTCCACTTTGGAATGAAGATTTGGTTTTTGTGGCTGCTGAGCCATTTGAGGAGAAATTGA CAATCACTGTGGAGGATCGCGTGCACCCTTCAAAAGATGAGGTGCTTGGGAAGATAAACCTGCCACTGACCCTCTTTGAG AAGAGGCTAGACCACAGGCCGGTTCATTCCCGCTGGTTCAACCTTGAGAAATTTGGCTTTGGAGGGCTGGAAGGTGATAG GAGGAATGAGCTTAAATTTTCAAGCAGGATTCACCTGAGAGTTTCCCTTGAAGGTGGGTACCATGTCTTAGATGAATCCA CTTTGTACATAAGTGATCAAAGACCAACAGCAAGACAGCTATGGAAGCAGCCTATTGGGATACTTGAAGTAGGCATCTTA GGAGCACAAGGGCTTCTCCCAATGAAGATGAAGGATGGCCATGGCAGCACAGATGCATACTGTGTTGCCAAGTATGGTCA GAAATGGGTCAGAACCAGAACACTTTTGGACACTTTTAGTCCTAAATGGAATGAGCAATACACATGGGAGGTTTATGATC CTTGCACTGTGATAACATTGGGGGTTTTTGACAATTGCCATTTAGGTGGAGGTGAAAAAACTCCTGGTGGTAATGGAGCA CTAGATTCAAGGATTGGAAAGGTAAGGATTAGGCTATCAACACTGGAAGCTAATAGGATTTACACCAATTCTTACCCACT TCTTGTTTTGCACCCACATGGAGTTAAGAAGATGGGTGAGCTTCAGCTAGCAGTGAGGTTCACTGCACTCTCATTAGCCA ACATGGTTCATATTTATGGCCAACCTTTGCTCCCCAAGATGCACTACTTGCATCCTTTCACAGTTAACCAAATAGACAGC TTAAGGTACCAAGCCATGAACATTGTAGCTGCGAGGCTCGGCCGAGCTGAACCATCTCTGAGGAAGGAAGTGGTGGAGTA CATGTTGGATGTTGATTCCCACATGTGGAGCATGAGAAGAAGCAAAGCTAACTTCTTTCGCATCATGTCGCTTTTATCTG GTTTGATCACCATGGGGAGATGGTTCAGTGATGTTTGCAATTGGAAGAACCACATCACATCAATTCTAGTTCACATTCTC TTCCTGATACTGATATTCTACCCTGAATTGATCCTGCCAACTGTGTTTCTCTACATGTTCTTGATTGGTCTTTGGAACTA CAGGTTCCGGGCGAAAAACCCATCTCACATGGATACCAAACTCTCATGGGCAGAAGGTGTTCACCCAGATGAGCTTGATG AGGAGTTTGACACATTCCCCACTTCGAGATCACATGACATGGTGAGAATGAGGTATGACAGGCTCAGAACTGTTGCAGGG AGGATTCAGACAATTGTGGGGGACATTGCTACTCAAGGGGAGAGATTTCAGTCTTTATTGAGCTGGAGAGACCCCAGAGC AACCAGCATCTTTGTGTTGTTTTGCTTGTGTGCCGCTGTGGTTCTCTACGCCGCGCCATTCAGAGTGGTGGCAATGGTAA CAGGCTTGTACCATTTGAGACATCCAAAGTTTAGGAGCAAGCTACCTTCAGTACCAAGTAATTTCTTCAAGAGGCTCCCA GCTAGAACAGATAGTTTGCTGTGA
Protein sequence (LotjaGi3g1v0057900.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNSVNPQLHDQRYNLNSTNQQPRIISETPRPGSPITSNPQLGGRGWGSGGERFTSTYDLVEQMFYLYVRVVKAKNLPPGT ITSSCSPYVEVKMGNYKGRTKHMEKKLSPEWNQVFAFSKDSIQSSFLEVFVKDKEMVGRDDYIGRVIFDLNEVPTRVPPD SPLAPQWYRLEDLRGEGKVNGDIMLAVWMGTQADDAFSDAWHSDAATVYGEGVLNIRSKVYVSPKLWYLRVNVIEAQDVI PGDRNRLPEVFVKAQVGCQVLKTKICPTSTRTTTPLWNEDLVFVAAEPFEEKLTITVEDRVHPSKDEVLGKINLPLTLFE KRLDHRPVHSRWFNLEKFGFGGLEGDRRNELKFSSRIHLRVSLEGGYHVLDESTLYISDQRPTARQLWKQPIGILEVGIL GAQGLLPMKMKDGHGSTDAYCVAKYGQKWVRTRTLLDTFSPKWNEQYTWEVYDPCTVITLGVFDNCHLGGGEKTPGGNGA LDSRIGKVRIRLSTLEANRIYTNSYPLLVLHPHGVKKMGELQLAVRFTALSLANMVHIYGQPLLPKMHYLHPFTVNQIDS LRYQAMNIVAARLGRAEPSLRKEVVEYMLDVDSHMWSMRRSKANFFRIMSLLSGLITMGRWFSDVCNWKNHITSILVHIL FLILIFYPELILPTVFLYMFLIGLWNYRFRAKNPSHMDTKLSWAEGVHPDELDEEFDTFPTSRSHDMVRMRYDRLRTVAG RIQTIVGDIATQGERFQSLLSWRDPRATSIFVLFCLCAAVVLYAAPFRVVAMVTGLYHLRHPKFRSKLPSVPSNFFKRLP ARTDSLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 604 | 604 | - | – | |
| MobiDBLite | 1 | 47 | 47 | - | – | |
| MobiDBLite | 1 | 43 | 43 | - | – | |
| PANTHER | 9 | 807 | 799 | 0.0 | – | |
| PANTHER | 9 | 807 | 799 | 0.0 | – | |
| Gene3D | 60 | 205 | 146 | 1.7E-29 | ||
| CDD | 65 | 191 | 127 | 2.06245E-65 | – | |
| SUPERFAMILY | 65 | 204 | 140 | 9.38E-32 | – | |
| SMART | 65 | 162 | 98 | 9.1E-19 | ||
| Pfam | 65 | 168 | 104 | 2.5E-20 | ||
| ProSiteProfiles | 66 | 147 | 82 | 14.896 | ||
| Gene3D | 215 | 363 | 149 | 6.2E-22 | ||
| Pfam | 227 | 335 | 109 | 5.6E-19 | ||
| SUPERFAMILY | 227 | 384 | 158 | 2.23E-28 | – | |
| SMART | 228 | 330 | 103 | 2.9E-10 | ||
| CDD | 228 | 382 | 155 | 5.27011E-79 | – | |
| ProSiteProfiles | 229 | 313 | 85 | 11.3 | ||
| Gene3D | 374 | 531 | 158 | 2.4E-24 | ||
| SUPERFAMILY | 393 | 529 | 137 | 2.23E-26 | – | |
| Pfam | 393 | 507 | 115 | 8.9E-22 | ||
| CDD | 394 | 524 | 131 | 1.52052E-68 | – | |
| SMART | 394 | 504 | 111 | 2.3E-12 | ||
| ProSiteProfiles | 395 | 489 | 95 | 9.124 | ||
| Phobius | 605 | 623 | 19 | - | – | |
| Phobius | 624 | 634 | 11 | - | – | |
| Phobius | 635 | 667 | 33 | - | – | |
| TMHMM | 645 | 667 | 23 | - | – | |
| Pfam | 652 | 807 | 156 | 5.1E-78 | ||
| Phobius | 668 | 749 | 82 | - | – | |
| TMHMM | 750 | 772 | 23 | - | – | |
| Phobius | 750 | 779 | 30 | - | – | |
| Phobius | 780 | 807 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi3g1v0057900.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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