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TREX

Transcript Explorer
for L. japonicus reference genomes

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

Repeat Search

  • IPR013583
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We have found 36 results. Now displaying 1 of 1 with 50 rows per page. This search has taken 5.666s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
Lj0g3v0125299.1
n.a. PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Glycine max] gi|356520422|ref|XP_003528861.1| chr0 56290712 56292580 -
2 domain predictions
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Lj0g3v0216959.1
n.a. C2 domain-containing protein [Arabidopsis lyrata subsp]. lyrata] gi|297807817|ref|XP_002871792.1| chr0 110295364 110298829 -
2 domain predictions
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Lj0g3v0297259.1
n.a. PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Fragaria vesca subsp]. vesca] gi|470137256|ref|XP_004304385.1| chr0 154488738 154492264 +
2 domain predictions
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Lj0g3v0335339.1
n.a. Multiple C2 and transmembrane domain-containing protein [Medicago truncatula] gi|358343805|ref|XP_003635987.1| chr0 175599506 175602999 +
2 domain predictions
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Lj1g3v1858440.1
n.a. anthranilate phosphoribosyltransferase-like protein [Arabidopsis thaliana] gi|62319716|dbj|BAD95264.1| chr1 22501774 22502354 -
2 domain predictions
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Lj2g3v2017630.1
n.a. PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Cicer arietinum] gi|502159940|ref|XP_004511581.1| chr2 30934054 30939084 +
2 domain predictions
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Lj3g3v0465930.1
n.a. PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Glycine max] gi|356542393|ref|XP_003539651.1| chr3 5399879 5403849 -
2 domain predictions
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Lj3g3v0881640.1
n.a. PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Cicer arietinum] gi|502167178|ref|XP_004514073.1| chr3 10724047 10726937 +
2 domain predictions
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Lj3g3v0883670.1
n.a. Anthranilate phosphoribosyltransferase-like protein [Medicago truncatula] gi|357473563|ref|XP_003607066.1| chr3 10735634 10738162 -
2 domain predictions
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Lj3g3v3271560.1
n.a. PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Glycine max] gi|356538925|ref|XP_003537951.1| chr3 40225094 40228235 -
2 domain predictions
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Lj3g3v3755410.1
n.a. PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Glycine max] gi|356542988|ref|XP_003539945.1| chr3 45512751 45517201 +
2 domain predictions
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Lj4g3v1333420.1
n.a. PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Fragaria vesca subsp]. vesca] gi|470118218|ref|XP_004295231.1| chr4 20509751 20511468 +
2 domain predictions
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Lj4g3v1614760.1
n.a. PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Cicer arietinum] gi|502152114|ref|XP_004508771.1| chr4 23770575 23774339 -
2 domain predictions
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LotjaGi1g1v0010800.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G57880.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|G7KEK7|G7KEK7_MEDTR Anthranilate phosphoribosyltransferase-like protein; Found in the gene: LotjaGi1g1v0010800 LjG1.1_chr1 1327760 1330438 -
2 domain predictions
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LotjaGi1g1v0473700.1
n.a. C2 domain-containing family protein; TAIR: AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|G7L3K6|G7L3K6_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi1g1v0473700 LjG1.1_chr1 98406599 98414680 +
2 domain predictions
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LotjaGi1g1v0724400.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G57880.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|V7CZG0|V7CZG0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0724400 LjG1.1_chr1 129567279 129571403 -
2 domain predictions
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LotjaGi1g1v0724400.2
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G57880.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|V7CZG0|V7CZG0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0724400 LjG1.1_chr1 129567880 129570300 -
2 domain predictions
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LotjaGi2g1v0091700.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT5G17980.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|A0A072UIE1|A0A072UIE1_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi2g1v0091700 LjG1.1_chr2 27531764 27535146 -
2 domain predictions
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LotjaGi2g1v0110400.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G03680.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|I1MVS7|I1MVS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0110400 LjG1.1_chr2 39568883 39579078 +
2 domain predictions
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LotjaGi2g1v0110400.2
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G03680.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|I1MVS7|I1MVS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0110400 LjG1.1_chr2 39569241 39573579 +
2 domain predictions
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LotjaGi2g1v0110400.3
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G03680.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|A0A151QV78|A0A151QV78_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0110400 LjG1.1_chr2 39569349 39572330 +
2 domain predictions
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LotjaGi2g1v0110400.4
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G03680.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|I1MVS7|I1MVS7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0110400 LjG1.1_chr2 39569349 39572330 +
2 domain predictions
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LotjaGi2g1v0433600.1
n.a. C2 domain-containing family protein; TAIR: AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|G7KC44|G7KC44_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi2g1v0433600 LjG1.1_chr2 93033709 93038890 +
2 domain predictions
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LotjaGi2g1v0433600.2
n.a. C2 domain-containing family protein; TAIR: AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|G7KC44|G7KC44_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi2g1v0433600 LjG1.1_chr2 93035370 93038427 +
2 domain predictions
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LotjaGi3g1v0057900.2
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT5G48060.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|K7LB38|K7LB38_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0057900 LjG1.1_chr3 6018573 6021116 -
2 domain predictions
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LotjaGi3g1v0124600.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT5G48060.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|I1KTK3|I1KTK3_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0124600 LjG1.1_chr3 15253353 15256340 +
2 domain predictions
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LotjaGi3g1v0124800.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G57880.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|A0A0B2RFC0|A0A0B2RFC0_GLYSO Multiple C2 and transmembrane domain-containing protein 2; Found in the gene: LotjaGi3g1v0124800 LjG1.1_chr3 15265525 15268733 -
2 domain predictions
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LotjaGi3g1v0381600.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|A0A072TQ03|A0A072TQ03_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi3g1v0381600 LjG1.1_chr3 77451401 77456854 +
2 domain predictions
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LotjaGi3g1v0381600.2
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT4G11610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|A0A072TQ03|A0A072TQ03_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi3g1v0381600 LjG1.1_chr3 77453470 77456490 +
2 domain predictions
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LotjaGi3g1v0496600.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G57880.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|A0A072ULK6|A0A072ULK6_MEDTR C2 calcium/lipid-binding and GRAM domain protein; Found in the gene: LotjaGi3g1v0496600 LjG1.1_chr3 91466372 91470104 -
2 domain predictions
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LotjaGi3g1v0496600.2
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G57880.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|A0A072ULK6|A0A072ULK6_MEDTR C2 calcium/lipid-binding and GRAM domain protein; Found in the gene: LotjaGi3g1v0496600 LjG1.1_chr3 91466652 91469059 -
2 domain predictions
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LotjaGi3g1v0556700.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT1G22610.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|I1LNN7|I1LNN7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0556700 LjG1.1_chr3 97448403 97451465 +
2 domain predictions
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LotjaGi4g1v0246700.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT1G74720.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|B8XCH5|QKY_ARATH Protein QUIRKY; TrEMBL-Plants: tr|A0A0S3R7Q2|A0A0S3R7Q2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi4g1v0246700 LjG1.1_chr4 59812619 59816673 -
2 domain predictions
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LotjaGi5g1v0142800.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G57880.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|V7CZG0|V7CZG0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0142800 LjG1.1_chr5 35465329 35469140 +
2 domain predictions
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LotjaGi5g1v0142800.2
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT3G57880.1 Calcium-dependent lipid-binding (CaLB domain) plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|V7CZG0|V7CZG0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0142800 LjG1.1_chr5 35466413 35468823 +
2 domain predictions
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LotjaGi5g1v0143900.1
n.a. C2 calcium/lipid-binding and GRAM domain protein; TAIR: AT5G06850.1 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein; Swiss-Prot: sp|Q9FL59|FTIP1_ARATH FT-interacting protein 1; TrEMBL-Plants: tr|A0A072TRG9|A0A072TRG9_MEDTR Calcium-dependent lipid-binding (CaLB domain) family protein; Found in the gene: LotjaGi5g1v0143900 LjG1.1_chr5 36118663 36121984 +
2 domain predictions
 –