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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0111800 |
| Transcript ID | LotjaGi3g1v0111800.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent ARF-type GTPase activating family protein; TAIR: AT3G07940.1 Calcium-dependent ARF-type GTPase activating protein family; Swiss-Prot: sp|Q8L7A4|AGD11_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD11; TrEMBL-Plants: tr|A0A0B2QNN2|A0A0B2QNN2_GLYSO Putative ADP-ribosylation factor GTPase-activating protein AGD11; Found in the gene: LotjaGi3g1v0111800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13789446..13794133) extracted from Lotus japonicus Gifu genome v1.2.
GGCGCATTTTTTATTCTAAAATCAAGGATTAGCCATAGGGGGCGTTTCCTATTAAATACCTGGACATTAGACTTGATATT CTTAATGAACTTCCAATTTTACCTTCTTGCTAATTTCTTTTTAGTATGTGTAATTCTAAAAAAGATCAACCGTGTGTTTT ATGTTAATATCTTACACTGTAGACGCGCCAGATCTCAACTTGGTTATTGTCCTTTCAAAAAGAAACTTTATCTCACATGG CTTTACATGATTAGTTTGATCTTAACAATTAATTATATTTCCTCATACTTTCAATTATTAGGACCACAGCAAAGGCTAGA CAATCTGATGCGTCAAGCTGGGAACAGGTATTGCGCTGATTGTGGATCATTAGAGCCAAAATGGGTGTAAGTATCATCAG CTTGGTTCTTAAAGGAATTTAGCCTACATGCATTTCTCACTGACCCTGTTGTTTAAATAACATGATCACAATCCACGTAC TAGATGTTGTTGCTGTATCTTTCTGGAAAAATGTTTTCATTCATTCTCTAAGTTGACTGACGAGAAAAATATTCCTTTTG AAGACATGAAATATGATATTAAAAGTTCATTGACACGTTAGTTTTATCAGAGAATCATTGGTTCATATTTTTCTTTTAAT TGTATTTGATTTTATTTACTGCATTTCTTTGATATCAGATCTTCAAGTCATGGAGTATTTATCTGCATCAAGTGCTCTGG TATACATAGAAGCCTAGGAGTCCATATATCGAAGGTATGTTCCTAAATCCTAACATAACATGTAAGAAACTAGTTTTTTG ACAGCTTACAACGATCATCTACCTTTCCAAGGATGTATTTCTTCTTGGACATAAAAGAAGAGGGTTGGGAGTGTTACAAT AAATTATGAGAAAATTACTTCTCTGATATCTCAGCTATCTGGAAACATTTATCCTAGGGTAGACTATGTTCACAATTTAT AATCTCAGCTAAAGGTTGTTTTTAAATTAAAAAAATACTTCATCCTTTATAGTGAACTATTTCTGAAGTTTTATTACATT ATATACAACAATTCACACACTTTTCTGTACATTCCCTGCTTTCTTTGTTATCCATCCTTCTCTTCTGTCAACTTACTCCG TGCGTGTTTGGAACAACATTGGCATATTGATTTTGGTAAAAAACTAAAATGAGTTAAAGTGAGGTGAAAGTGAAGGGATT TATGTTTGGATAATTTTACGGGAAGTGATTTGTTTAGCTGTATAGGGTAATTTTGTGAAATCCAGTTATGAAATCCAACA ATTGGTTATGTCCACCGCAGAAGCTACTCTCTGTAGCTTCTCTGAAGAATTTATTTTGGGACCACAAATCAACTCTCTAA GTTAATTGTCAAACATCTATATAACCACCTAAAAGTAATTCTAGTCAATGAGAATTGATTCTAAGGCTCCCAAACATACA CTTCATGTTAAATTGTATGAAAGTGATCCCATCATTGATCACTAACCACTGTGACTGAGAATAGTTATCTGATGAAATTC TTTGTAAATAGAACAGTTGTTGTAAACCAAAATTTAAATTACTTTTAGTGAAGGCCATGCAAAAGAAGATATGATTCCAT GTAGTTGATGGACATTTTATGTTTTAACTATCATGGGAGAAATACTAAATGATAAATAACCTTCGTTAGTGTAGAAGGGG AAGTTATTGTGAAGACTAAAAATCTCTTTGACAACTTTGTATTCAAATTTAGCACCTAGTCATTGCTATTTAAGCAATCC TAACATGTTCAGTATTCACGATTTGGCGGGAGGGGAGTATTCTCTGCCTCTTGTTCAGGCCCACCCTTTCATATGCTTAC ACACAATTAGTTGCATATTTTCAAGTGGAAAATCTAACATTATGTGATATTATTTTAGGTTCTATCACTGAAGCTAGATG AATGGACAGATGAACAAGTTGATGCATTAGTGAAGATGGGTGGAAATACAGTGATCAATAAGAAGTATGAAGCTTGCATG CCAAGTAACATAAAAAAACCAAATCCACATTCCACCATTGAGGAGCGCTCTGATTATATTAGGTAACTGAAAAAAAAGAA GCATGCATACATACAACCATATCATATTTCTGTTAAGGAAGTACTCCATCGTGATTCGCAGATGTAATTTTATGATTCAG GAGAAAATATGAGCTGCTACAGTTTTTGGATACCGAGGAGAATTTGTGCTGTCCCTTTGTACCAACTCATGGAAGAACTT CATCCTCGTGCAGCAGTTCCTCCTCACAATACAAAAAACAATATGATAAACAACAAACTAAAAGTCGTATTGGTTTATCA TTTCGAAACAGCTGGGGAAGAAAAGATTCTGAGAATAAAAGTACAAAGAAGAGCAACTCGTTGGTAATGTTTTATTTCAT TATTGGTAGCTCTGTCATTCATCTGTTGAATAAACTTTGAAGTCAGTTAATTCAACACATTATGCTTTGCAATATGGAAT ATTTGTATTCTACTTTGAATTCTTTTTATGTTTGTGTATGTGATATTATTACACAATGTATTCTACTTAGATTTTGTTGC ATTGACATTCTGTTACTTCTTTTTCCATATGTGTTTTTTTACTTCAAAGCCTTACTAATAATAAGCATCTTGGGTATTGC ACCATTCATCTAATCTGAAGCATGCTATTTTTTCACCTTATTCTGAATAGAATATGACTGAAAATGATGCGTAGTGAACT ATTAACTTTATTTTTTTCCTTGAATACTGAATCCTGTTTCTCCCTATTTACTGTTATAGGCAGGTATGATTGAATTTGTT GGATTGATAAAGGTTAATGTGGTCAAAGGCACAAACCTGGCTATCCGGGATGTAATGACTAGTGACCCTTATGTCATCCT CTCTCTGGGTCACCAAGTGAGTTTCCTCATCTCTCAACTACTTGGCATTATACATGTAAAGGAGAACATTAACATGAACA ATGTAACATCTTTAATATCTGTTCTTACAGTCGATGAAGACACGTGTCATAAAGAGCAATTTAAATCCAGTTTGGAATGA AAGCCTGATGCTGTCAATTCCCGATAGCGTTCCTCCTCTTAAAGTGGTAAGTCCAATTGATTAGGATTGTGAGTAATCAT AAGAGGAAAGACAAAAAGATGAAATTGGTCTTTGGATAAGTCCTCCTCTTATAGCTGACCTCTTTAAGTGGGATAAGGCT TTTGTTGTTGTTGTTGTTGTTGTTTCTGTTGTTGTTGTTGTAATCTTGTCTTAGAATTTATTTAGATTTTCATCAATGAC AGTCTCAGCAAAAAAAAGAAAGTGAGAGAATGCAAATGCGGAGTATGAGAGGAGGTGACAATAAGCAACAATCACAAAAC AAATTGATACATATTTAAATATATAATCTTAATGCTGCAATTGGTGAAATGATATAACAAATAAGTGAATAAGTAAATGA TTTTGTTATTAGGAAATCATAATATAAAACAATTACATATTTAGTATGAAGAAATTCTTCAAATATAAAAGTTACTAAGG TCATCATCTATATAACATCTAAAATTGTGACAGTTTGTGCACCACACCTACAATCATCAACATTACTGGAAGATGAAAAC CTCATCAAATCATGGTTCCTCATTCGTCTAAAAAAGTTATGAGAGTTGAATAAATTTTTTGAATATTTATATTAGTTTAA GCTCAACTAGGAAGTCAGTAATTGAACTGTGGGCTATTTGCTTATATGGAAAAATAATACAGATTCAAGTTGTTTAAATG ACACAATCCGTGCTTCATATTTACTGTAAGATAAATGGATTTAAGGGGTTGCAAATTGAAAAAAAAAAAGTGTACGGTCT CCACCCTCTCTGGCTTGAATTTCATATTTTGGGAATCAAATGACACAATATGCACATTAAGTTCATACAAGAAACCATGA TCCTGTGTTCTCAGCGCTTCACGATACATAGTTCATGTAACTGTGCTCCTTCTATTACAATATATTTTACTATCTCTTAT TCTTATGCTTCATGTTGCATTCTTTTTATCTTCTTTGCCCTACCTATATCTACAGTTTATATTAAAGAAAATGTTAACTA AAGATTTCTTTATACTATTAACTTTCATTTCATTTTGACATTCTTAAATTGTTATCAATAACTTGAGTGTTGCAAAACAG CTTCCTCTTTCTCTCTTCTTATAAATCCCATTTTCCCTCCTAATCTGCTCAACTAGTGTGAAGTGTCTTTTATGTGTACA TTTAACTTATTTAGATTCCATCATCCAAACTTTTCTATTCATTGCTTCATTGCTACATTTGTATCAGAAACCACTCCTTT AAGTTCTGTCATTGATAATATAGCTCTTATTCAAATTTTCTCTTCCATTCCTGTTTGATCAGATTTGATATGATGCTTAT ATGCAGCTTGTGTACGACAAGGACACTTTCTCAACTGATGATTTCATGGGTGAGGCTGAAATAGATATTCAACCTCTAGT CGCAGCTGCAAAGGCATATGAGAAATCATCGATCAACGAGTCGATGCAGCTTGGGAAATGGGTAGCGAGTGGTGACAACA ATCTTGTGAAAGATGGAATCATCACCCTTGAGGATGGGAAGGTCAGACAGGACATCTCAGTGAGGCTACAGAGAGTTGAG AGAGGTGTGCTGGAGATTGAGCTTGAATGTGTTCCTCTTACTCAGTAG
CDS sequence (LotjaGi3g1v0111800.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCGTCAAGCTGGGAACAGGTATTGCGCTGATTGTGGATCATTAGAGCCAAAATGGGTATCTTCAAGTCATGGAGTATT TATCTGCATCAAGTGCTCTGGTATACATAGAAGCCTAGGAGTCCATATATCGAAGGTTCTATCACTGAAGCTAGATGAAT GGACAGATGAACAAGTTGATGCATTAGTGAAGATGGGTGGAAATACAGTGATCAATAAGAAGTATGAAGCTTGCATGCCA AGTAACATAAAAAAACCAAATCCACATTCCACCATTGAGGAGCGCTCTGATTATATTAGGAGAAAATATGAGCTGCTACA GTTTTTGGATACCGAGGAGAATTTGTGCTGTCCCTTTGTACCAACTCATGGAAGAACTTCATCCTCGTGCAGCAGTTCCT CCTCACAATACAAAAAACAATATGATAAACAACAAACTAAAAGTCGTATTGGTTTATCATTTCGAAACAGCTGGGGAAGA AAAGATTCTGAGAATAAAAGTACAAAGAAGAGCAACTCGTTGGCAGGTATGATTGAATTTGTTGGATTGATAAAGGTTAA TGTGGTCAAAGGCACAAACCTGGCTATCCGGGATGTAATGACTAGTGACCCTTATGTCATCCTCTCTCTGGGTCACCAAT CGATGAAGACACGTGTCATAAAGAGCAATTTAAATCCAGTTTGGAATGAAAGCCTGATGCTGTCAATTCCCGATAGCGTT CCTCCTCTTAAAGTGCTTGTGTACGACAAGGACACTTTCTCAACTGATGATTTCATGGGTGAGGCTGAAATAGATATTCA ACCTCTAGTCGCAGCTGCAAAGGCATATGAGAAATCATCGATCAACGAGTCGATGCAGCTTGGGAAATGGGTAGCGAGTG GTGACAACAATCTTGTGAAAGATGGAATCATCACCCTTGAGGATGGGAAGGTCAGACAGGACATCTCAGTGAGGCTACAG AGAGTTGAGAGAGGTGTGCTGGAGATTGAGCTTGAATGTGTTCCTCTTACTCAGTAG
Protein sequence (LotjaGi3g1v0111800.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MRQAGNRYCADCGSLEPKWVSSSHGVFICIKCSGIHRSLGVHISKVLSLKLDEWTDEQVDALVKMGGNTVINKKYEACMP SNIKKPNPHSTIEERSDYIRRKYELLQFLDTEENLCCPFVPTHGRTSSSCSSSSSQYKKQYDKQQTKSRIGLSFRNSWGR KDSENKSTKKSNSLAGMIEFVGLIKVNVVKGTNLAIRDVMTSDPYVILSLGHQSMKTRVIKSNLNPVWNESLMLSIPDSV PPLKVLVYDKDTFSTDDFMGEAEIDIQPLVAAAKAYEKSSINESMQLGKWVASGDNNLVKDGIITLEDGKVRQDISVRLQ RVERGVLEIELECVPLTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 116 | 116 | 8.0E-43 | ||
| SMART | 1 | 116 | 116 | 2.9E-33 | ||
| ProSiteProfiles | 1 | 116 | 116 | 24.91 | ||
| CDD | 1 | 103 | 103 | 2.60104E-56 | – | |
| PANTHER | 1 | 338 | 338 | 2.6E-195 | – | |
| PANTHER | 1 | 338 | 338 | 2.6E-195 | – | |
| SUPERFAMILY | 2 | 109 | 108 | 4.97E-38 | ||
| Pfam | 2 | 110 | 109 | 6.7E-35 | ||
| PRINTS | 6 | 25 | 20 | 1.5E-19 | ||
| PRINTS | 25 | 42 | 18 | 1.5E-19 | ||
| PRINTS | 46 | 67 | 22 | 1.5E-19 | ||
| MobiDBLite | 124 | 148 | 25 | - | – | |
| Gene3D | 179 | 335 | 157 | 8.2E-29 | ||
| CDD | 181 | 325 | 145 | 4.93859E-81 | – | |
| SUPERFAMILY | 181 | 273 | 93 | 4.83E-28 | – | |
| SMART | 183 | 278 | 96 | 5.6E-20 | ||
| Pfam | 183 | 271 | 89 | 3.9E-24 | ||
| ProSiteProfiles | 184 | 263 | 80 | 16.524 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
Expression pattern of LotjaGi3g1v0111800.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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