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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0111800 |
Transcript ID | LotjaGi3g1v0111800.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Calcium-dependent ARF-type GTPase activating family protein; TAIR: AT3G07940.1 Calcium-dependent ARF-type GTPase activating protein family; Swiss-Prot: sp|Q8L7A4|AGD11_ARATH Probable ADP-ribosylation factor GTPase-activating protein AGD11; TrEMBL-Plants: tr|K7LQK9|K7LQK9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0111800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:13788344..13795804) extracted from Lotus japonicus Gifu genome v1.2.
CTGGAAAATTCTATTTATGGCTTATAGATGAGACATTGATGATACCAATGTGTGTTTGTTAAATACTTGTCAATTTGTCA CGTACAAGACTTAACACGCCCATGGAATTGTAAGCGCGTTCAATTATTTCTCTCTGAACATCAAATCGAATGTTCCTTGG TGAGTCAAACAACATTCATCCCATCATAACAAAGATTATCTTCAATCAATCTCATTAATCTTTAATTTTCTCACATTGAC TTTTCATACCCAACAATTCCATTTCTTTAATATCAATTTTTTTAATAAAAAACTATTCAATTTGTCAAGAACACTGATTC TAACAATAAAATTCATGTTTTTTTTCTTCTTTTTCCTGAATCTCTGTCTTGTTTTGTTTAGGGGGTTTTCAATTCAATTT TCCCAGTTTCAGATTTTTTCATCTTCAATTCAAGGGGTTTCAAACACCAATTTCCTTAAAGATTCATTGAAAATCTTTAG CTTTCCTACCTCATTGTATGCTGCTTCAATGATTCACAAAACCCATTAATTAATTTCCTTGATTTGGTGTTTAATTTTTG ACAATCTTTTGGTTTGTTGCAGAGAATAAGCTGCCATTGACTCATGCCAATGTTTAAGGGGAGAAAAGATACCATCTAAT CTGTAAGATTTTCTTAAAAAAAGTTTTTTCCCCTTCTATTATAGCTGTGTTAATTAAACCAATTGGCCATAGTTTATGTT TATTCATTCTTAGTTGCATTGTGGCTCTCACATTTCAGCCTAATGATAATCCCAATAGTGTATGTTTCTTCATTTTGAGT TGTATTGTGGCTTTTCTCGTTGCGACCTCTTGTGCATTGTTTATGTTTCTTCACGTTGAATCGTATTTTCCATTTGAAAT ATGATCAGAATGAATGTGTGAAGTGCCTTTATATCTCCATGCAGAGAAGCAGTTGACAAATTTATGGCTGTTCTGAGATT GTAGTGCCCTTACTCGATTTGGTTTCTATTATTGGAAACTGGAGATGTCTATACATCAGGAAAATTCTGATATCAATGGT GTATCAGGTAAATTTTTTTATCCATTTAGTCGCCTTCTTCTTCTTCCCCTGTCCCCTCCTTTATTTTGGTTAAGCATTCA TATGACAGATCACCCATAGGTGAGAAGCGATAATGCAAAATCCTTTCTCTCAAGTAACTGGAAAATCATGATAAGTACTT TTGAATTTTTTAATAATTATGAATGCTACTACCAGAGGTGTAGTTAATTCCCTATAGAATATATAGTTAAATGTTTGTTT GTCATGAATTCTGGTAGAATTTTTTCATTTTTATGATTTTTTGAGGGTGTATCAACTTTAGATATTGTGGCTTGCACCAT GTGGTATGACTAATGCAGAATCAGTGATGAGTTATATCATCATTGACTTCATTTAAGTAAAATAGAAGTATTTCCTAAGT TTTTTTTGTTGAAAGGCAAGTATTTTCTAAATTTAACTTACTAGTTCCTAACTATACAGTGAAATGTCTCAGCTGCAGGG CCAGGATCTTGCCTTTATGATCTCTTCTGCTCTGAAACACCAAGTTTGAATTCTCAAAGTCGAAAGGAGGAATGGATATT TTCTGGTAATTTACCCTTTGTATAGTATTGGTTTTGTTATCTATGCTTTATTTTGGTTTGTGAAGTGTATAGGCGCATTT TTTATTCTAAAATCAAGGATTAGCCATAGGGGGCGTTTCCTATTAAATACCTGGACATTAGACTTGATATTCTTAATGAA CTTCCAATTTTACCTTCTTGCTAATTTCTTTTTAGTATGTGTAATTCTAAAAAAGATCAACCGTGTGTTTTATGTTAATA TCTTACACTGTAGACGCGCCAGATCTCAACTTGGTTATTGTCCTTTCAAAAAGAAACTTTATCTCACATGGCTTTACATG ATTAGTTTGATCTTAACAATTAATTATATTTCCTCATACTTTCAATTATTAGGACCACAGCAAAGGCTAGACAATCTGAT GCGTCAAGCTGGGAACAGGTATTGCGCTGATTGTGGATCATTAGAGCCAAAATGGGTGTAAGTATCATCAGCTTGGTTCT TAAAGGAATTTAGCCTACATGCATTTCTCACTGACCCTGTTGTTTAAATAACATGATCACAATCCACGTACTAGATGTTG TTGCTGTATCTTTCTGGAAAAATGTTTTCATTCATTCTCTAAGTTGACTGACGAGAAAAATATTCCTTTTGAAGACATGA AATATGATATTAAAAGTTCATTGACACGTTAGTTTTATCAGAGAATCATTGGTTCATATTTTTCTTTTAATTGTATTTGA TTTTATTTACTGCATTTCTTTGATATCAGATCTTCAAGTCATGGAGTATTTATCTGCATCAAGTGCTCTGGTATACATAG AAGCCTAGGAGTCCATATATCGAAGGTATGTTCCTAAATCCTAACATAACATGTAAGAAACTAGTTTTTTGACAGCTTAC AACGATCATCTACCTTTCCAAGGATGTATTTCTTCTTGGACATAAAAGAAGAGGGTTGGGAGTGTTACAATAAATTATGA GAAAATTACTTCTCTGATATCTCAGCTATCTGGAAACATTTATCCTAGGGTAGACTATGTTCACAATTTATAATCTCAGC TAAAGGTTGTTTTTAAATTAAAAAAATACTTCATCCTTTATAGTGAACTATTTCTGAAGTTTTATTACATTATATACAAC AATTCACACACTTTTCTGTACATTCCCTGCTTTCTTTGTTATCCATCCTTCTCTTCTGTCAACTTACTCCGTGCGTGTTT GGAACAACATTGGCATATTGATTTTGGTAAAAAACTAAAATGAGTTAAAGTGAGGTGAAAGTGAAGGGATTTATGTTTGG ATAATTTTACGGGAAGTGATTTGTTTAGCTGTATAGGGTAATTTTGTGAAATCCAGTTATGAAATCCAACAATTGGTTAT GTCCACCGCAGAAGCTACTCTCTGTAGCTTCTCTGAAGAATTTATTTTGGGACCACAAATCAACTCTCTAAGTTAATTGT CAAACATCTATATAACCACCTAAAAGTAATTCTAGTCAATGAGAATTGATTCTAAGGCTCCCAAACATACACTTCATGTT AAATTGTATGAAAGTGATCCCATCATTGATCACTAACCACTGTGACTGAGAATAGTTATCTGATGAAATTCTTTGTAAAT AGAACAGTTGTTGTAAACCAAAATTTAAATTACTTTTAGTGAAGGCCATGCAAAAGAAGATATGATTCCATGTAGTTGAT GGACATTTTATGTTTTAACTATCATGGGAGAAATACTAAATGATAAATAACCTTCGTTAGTGTAGAAGGGGAAGTTATTG TGAAGACTAAAAATCTCTTTGACAACTTTGTATTCAAATTTAGCACCTAGTCATTGCTATTTAAGCAATCCTAACATGTT CAGTATTCACGATTTGGCGGGAGGGGAGTATTCTCTGCCTCTTGTTCAGGCCCACCCTTTCATATGCTTACACACAATTA GTTGCATATTTTCAAGTGGAAAATCTAACATTATGTGATATTATTTTAGGTTCTATCACTGAAGCTAGATGAATGGACAG ATGAACAAGTTGATGCATTAGTGAAGATGGGTGGAAATACAGTGATCAATAAGAAGTATGAAGCTTGCATGCCAAGTAAC ATAAAAAAACCAAATCCACATTCCACCATTGAGGAGCGCTCTGATTATATTAGGTAACTGAAAAAAAAGAAGCATGCATA CATACAACCATATCATATTTCTGTTAAGGAAGTACTCCATCGTGATTCGCAGATGTAATTTTATGATTCAGGAGAAAATA TGAGCTGCTACAGTTTTTGGATACCGAGGAGAATTTGTGCTGTCCCTTTGTACCAACTCATGGAAGAACTTCATCCTCGT GCAGCAGTTCCTCCTCACAATACAAAAAACAATATGATAAACAACAAACTAAAAGTCGTATTGGTTTATCATTTCGAAAC AGCTGGGGAAGAAAAGATTCTGAGAATAAAAGTACAAAGAAGAGCAACTCGTTGGTAATGTTTTATTTCATTATTGGTAG CTCTGTCATTCATCTGTTGAATAAACTTTGAAGTCAGTTAATTCAACACATTATGCTTTGCAATATGGAATATTTGTATT CTACTTTGAATTCTTTTTATGTTTGTGTATGTGATATTATTACACAATGTATTCTACTTAGATTTTGTTGCATTGACATT CTGTTACTTCTTTTTCCATATGTGTTTTTTTACTTCAAAGCCTTACTAATAATAAGCATCTTGGGTATTGCACCATTCAT CTAATCTGAAGCATGCTATTTTTTCACCTTATTCTGAATAGAATATGACTGAAAATGATGCGTAGTGAACTATTAACTTT ATTTTTTTCCTTGAATACTGAATCCTGTTTCTCCCTATTTACTGTTATAGGCAGGTATGATTGAATTTGTTGGATTGATA AAGGTTAATGTGGTCAAAGGCACAAACCTGGCTATCCGGGATGTAATGACTAGTGACCCTTATGTCATCCTCTCTCTGGG TCACCAAGTGAGTTTCCTCATCTCTCAACTACTTGGCATTATACATGTAAAGGAGAACATTAACATGAACAATGTAACAT CTTTAATATCTGTTCTTACAGTCGATGAAGACACGTGTCATAAAGAGCAATTTAAATCCAGTTTGGAATGAAAGCCTGAT GCTGTCAATTCCCGATAGCGTTCCTCCTCTTAAAGTGGTAAGTCCAATTGATTAGGATTGTGAGTAATCATAAGAGGAAA GACAAAAAGATGAAATTGGTCTTTGGATAAGTCCTCCTCTTATAGCTGACCTCTTTAAGTGGGATAAGGCTTTTGTTGTT GTTGTTGTTGTTGTTTCTGTTGTTGTTGTTGTAATCTTGTCTTAGAATTTATTTAGATTTTCATCAATGACAGTCTCAGC AAAAAAAAGAAAGTGAGAGAATGCAAATGCGGAGTATGAGAGGAGGTGACAATAAGCAACAATCACAAAACAAATTGATA CATATTTAAATATATAATCTTAATGCTGCAATTGGTGAAATGATATAACAAATAAGTGAATAAGTAAATGATTTTGTTAT TAGGAAATCATAATATAAAACAATTACATATTTAGTATGAAGAAATTCTTCAAATATAAAAGTTACTAAGGTCATCATCT ATATAACATCTAAAATTGTGACAGTTTGTGCACCACACCTACAATCATCAACATTACTGGAAGATGAAAACCTCATCAAA TCATGGTTCCTCATTCGTCTAAAAAAGTTATGAGAGTTGAATAAATTTTTTGAATATTTATATTAGTTTAAGCTCAACTA GGAAGTCAGTAATTGAACTGTGGGCTATTTGCTTATATGGAAAAATAATACAGATTCAAGTTGTTTAAATGACACAATCC GTGCTTCATATTTACTGTAAGATAAATGGATTTAAGGGGTTGCAAATTGAAAAAAAAAAAGTGTACGGTCTCCACCCTCT CTGGCTTGAATTTCATATTTTGGGAATCAAATGACACAATATGCACATTAAGTTCATACAAGAAACCATGATCCTGTGTT CTCAGCGCTTCACGATACATAGTTCATGTAACTGTGCTCCTTCTATTACAATATATTTTACTATCTCTTATTCTTATGCT TCATGTTGCATTCTTTTTATCTTCTTTGCCCTACCTATATCTACAGTTTATATTAAAGAAAATGTTAACTAAAGATTTCT TTATACTATTAACTTTCATTTCATTTTGACATTCTTAAATTGTTATCAATAACTTGAGTGTTGCAAAACAGCTTCCTCTT TCTCTCTTCTTATAAATCCCATTTTCCCTCCTAATCTGCTCAACTAGTGTGAAGTGTCTTTTATGTGTACATTTAACTTA TTTAGATTCCATCATCCAAACTTTTCTATTCATTGCTTCATTGCTACATTTGTATCAGAAACCACTCCTTTAAGTTCTGT CATTGATAATATAGCTCTTATTCAAATTTTCTCTTCCATTCCTGTTTGATCAGATTTGATATGATGCTTATATGCAGCTT GTGTACGACAAGGACACTTTCTCAACTGATGATTTCATGGGTGAGGCTGAAATAGATATTCAACCTCTAGTCGCAGCTGC AAAGGCATATGAGAAATCATCGATCAACGAGTCGATGCAGCTTGGGAAATGGGTAGCGAGTGGTGACAACAATCTTGTGA AAGATGGAATCATCACCCTTGAGGATGGGAAGGTCAGACAGGACATCTCAGTGAGGCTACAGAGAGTTGAGAGAGGTGTG CTGGAGATTGAGCTTGAATGTGTTCCTCTTACTCAGTAGCTGAGATAGAAGTTCATAACTTAGCAGAATACAGTTTGGAG CATATATCAGTGTAGATTGTCTTGTCTCAGTTTCCCTTTGTATATTATCCTGTGAGACTGTGACCATCCTTCTGTAGATG AACAAATATGATTTATCAGTAAGTGTTTTCGGAAGAGACTTTATTGATAAATTTCAACCTTTTTGCCTTTTTGTTAAAGC TCATGCTCATGTTGGTAGAATTTATTTAAAAAGAAAAAGGAGCAGGATCCTATTTCCACTAACCAAGTTTAGGTTAATAT TCTCTCTTGAATCTTTATAGTCTTTTAGGTTTGTTATCTATAAACTTAATATATGGTAGGGTATTATGAATTTATGACAG ATTAATTCATATAATCAAACTACACTTAGTAGAAAAATAACAGGTCTTGAGGATGGTGATATTATCATATTTATTTCATT ATTTTCAGAAAAGAAAAGAGCAACGATACTGATTAAGAAGCATCATGGCACGAGATACACATGAAATGATCAATCTGGAG GACCAAATTGACTGCCGGTCGTACACCAAGAAGAGTGTGTCCCAATAACAGAGCACGCCGCGATGACCCTGCCTTAATGA TAACCCTGCCACCAAGGCAAGCCGATGATCAAAGGAGAACCCCAAACAATAGCAGGTTGGTGGCCGGGTCCTTCGCAGGC GGCAGAGTCTCGGCAAATACTTGGAAAAAGCACCTTAAGTCACTACTATTGCATGTTGCCGACCATCATCCGTTGATAAA CTTGCTGTATCCCCGAAAAAGACGTAGATGATCGCATTCACATACAACAGATATGGCGCTGAAAGTGGTAACAATGATGA TCATGTGGTCATTGAAGCTTCCATACAGAAAGGTGAAAAGAGTTTTCATCGATTAGGGGAGCTCCGCTGACATACTATTT TTTGTGCATTCAAGTCGTTGCGGTTCTTCGACAAAGAACTCATCCCTTATGATAATTGTCGTAACCAGGGTCACGACATG TCGATGAAAAAAATCAATGAAATATAACAATAAATAAATAGTATGGGATTTACAAATGAAAACACCAAAAAATACTTTGG GTATTTAGAACCTGATTTTGT
CDS sequence (LotjaGi3g1v0111800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTATACATCAGGAAAATTCTGATATCAATGGTGTATCAGCTGCAGGGCCAGGATCTTGCCTTTATGATCTCTTCTG CTCTGAAACACCAAGTTTGAATTCTCAAAGTCGAAAGGAGGAATGGATATTTTCTGGACCACAGCAAAGGCTAGACAATC TGATGCGTCAAGCTGGGAACAGGTATTGCGCTGATTGTGGATCATTAGAGCCAAAATGGGTATCTTCAAGTCATGGAGTA TTTATCTGCATCAAGTGCTCTGGTATACATAGAAGCCTAGGAGTCCATATATCGAAGGTTCTATCACTGAAGCTAGATGA ATGGACAGATGAACAAGTTGATGCATTAGTGAAGATGGGTGGAAATACAGTGATCAATAAGAAGTATGAAGCTTGCATGC CAAGTAACATAAAAAAACCAAATCCACATTCCACCATTGAGGAGCGCTCTGATTATATTAGGAGAAAATATGAGCTGCTA CAGTTTTTGGATACCGAGGAGAATTTGTGCTGTCCCTTTGTACCAACTCATGGAAGAACTTCATCCTCGTGCAGCAGTTC CTCCTCACAATACAAAAAACAATATGATAAACAACAAACTAAAAGTCGTATTGGTTTATCATTTCGAAACAGCTGGGGAA GAAAAGATTCTGAGAATAAAAGTACAAAGAAGAGCAACTCGTTGGCAGGTATGATTGAATTTGTTGGATTGATAAAGGTT AATGTGGTCAAAGGCACAAACCTGGCTATCCGGGATGTAATGACTAGTGACCCTTATGTCATCCTCTCTCTGGGTCACCA ATCGATGAAGACACGTGTCATAAAGAGCAATTTAAATCCAGTTTGGAATGAAAGCCTGATGCTGTCAATTCCCGATAGCG TTCCTCCTCTTAAAGTGCTTGTGTACGACAAGGACACTTTCTCAACTGATGATTTCATGGGTGAGGCTGAAATAGATATT CAACCTCTAGTCGCAGCTGCAAAGGCATATGAGAAATCATCGATCAACGAGTCGATGCAGCTTGGGAAATGGGTAGCGAG TGGTGACAACAATCTTGTGAAAGATGGAATCATCACCCTTGAGGATGGGAAGGTCAGACAGGACATCTCAGTGAGGCTAC AGAGAGTTGAGAGAGGTGTGCTGGAGATTGAGCTTGAATGTGTTCCTCTTACTCAGTAG
Protein sequence (LotjaGi3g1v0111800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSIHQENSDINGVSAAGPGSCLYDLFCSETPSLNSQSRKEEWIFSGPQQRLDNLMRQAGNRYCADCGSLEPKWVSSSHGV FICIKCSGIHRSLGVHISKVLSLKLDEWTDEQVDALVKMGGNTVINKKYEACMPSNIKKPNPHSTIEERSDYIRRKYELL QFLDTEENLCCPFVPTHGRTSSSCSSSSSQYKKQYDKQQTKSRIGLSFRNSWGRKDSENKSTKKSNSLAGMIEFVGLIKV NVVKGTNLAIRDVMTSDPYVILSLGHQSMKTRVIKSNLNPVWNESLMLSIPDSVPPLKVLVYDKDTFSTDDFMGEAEIDI QPLVAAAKAYEKSSINESMQLGKWVASGDNNLVKDGIITLEDGKVRQDISVRLQRVERGVLEIELECVPLTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 392 | 392 | 3.7E-200 | – | |
PANTHER | 1 | 392 | 392 | 3.7E-200 | – | |
Gene3D | 30 | 170 | 141 | 5.9E-45 | ||
ProSiteProfiles | 48 | 170 | 123 | 25.444 | ||
SUPERFAMILY | 49 | 163 | 115 | 1.44E-39 | ||
SMART | 49 | 170 | 122 | 7.9E-38 | ||
Pfam | 49 | 164 | 116 | 3.2E-36 | ||
CDD | 51 | 157 | 107 | 5.2982E-57 | – | |
PRINTS | 60 | 79 | 20 | 2.2E-19 | ||
PRINTS | 79 | 96 | 18 | 2.2E-19 | ||
PRINTS | 100 | 121 | 22 | 2.2E-19 | ||
MobiDBLite | 178 | 202 | 25 | - | – | |
Gene3D | 234 | 389 | 156 | 1.2E-28 | ||
CDD | 235 | 379 | 145 | 3.48793E-81 | – | |
SUPERFAMILY | 235 | 327 | 93 | 6.55E-28 | – | |
Pfam | 237 | 325 | 89 | 5.5E-24 | ||
SMART | 237 | 332 | 96 | 5.6E-20 | ||
ProSiteProfiles | 238 | 317 | 80 | 16.524 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | GTPase activator activity | Binds to and increases the activity of a GTPase, an enzyme that catalyzes the hydrolysis of GTP. |
Expression pattern of LotjaGi3g1v0111800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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