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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0147400 |
Transcript ID | LotjaGi3g1v0147400.1 |
Related isoforms 1 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | C2 domain-containing protein; TAIR: AT1G53590.1 Calcium-dependent lipid-binding (CaLB domain) family protein; Swiss-Prot: sp|Q93XX4|C2D61_ARATH C2 domain-containing protein At1g53590; TrEMBL-Plants: tr|A0A072VA30|A0A072VA30_MEDTR Calcium-dependent lipid-binding domain protein; Found in the gene: LotjaGi3g1v0147400 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:19802426..19811461) extracted from Lotus japonicus Gifu genome v1.2.
CCTGGAACTGATTCCCTTTAAAATTTGAGGGGCCTTGTGATGTTATTTTATTTAAAAATGAAATAGACACCCTCCATTCT CTATGTCCGTTACTTCCCTTGTACGCCACCGTTTCACCATTCCAGATGTTCCATTCTAAACACCCAGATTAGGACAGAGA ATGGTACAGTTACACTTCTTCACCCGCTCCACTTCCCTGTACAATATTTTAACATTTAAAATTCCTCCAATGTTTTGACC CAAATCCCTGTTCTTCATTTCATTTCATTTCATACCTCAACAACACTTCAAAATCAAAATCTTCTGTTGAATTTCAATAT CAATCATTAATAGCTTTTTGGCAAGTGGGGTCAATACCAAAGACTCATCAGTTTTTTAATACATTACATTTTTGGGTTCT CTTTTCAACACGCATATTCCGCGTTAACAGATTCAGATTTTGATTTGGATTAATGGGTCTCTATAAAGTTTGTAACTTCG TTGAAGAGACTAGTGATTTCAGTTAACAGGGTGTTTCAACAGTTTCAGTTTCAAAGAGATGGATATAACAGAAATTTCTA TCTTACATCATGTTGGGATTGTGCTGATTTGCATCTGGTTGCTATCTGCATTCAATTGCTGCCACCCAATTGCTTATTTT ATTTCTCTGATCTATATTTATCTGGTAAGGATCTTGCTTTGCAATTTTTTTGGATTTTCTATGTTTTCCCTTTTGTCTTA GTTTTTTGTTTTTGTTTTTGCTTTTTGATTGTTTAGTTTATGATTTGGAATAGAAACAGTTAAACAAAATTAGGCTCTTC TGAGTGTTTGGATCTGGTTTTGTAGCCTGTGGGCCATGTCTGTTTTTACCCTATTTGTATTTGTATAGGGTGTGGAATAT TCCATTTCTGACTTGGGTGTTTTTCTTTTTATTTGCAAAGGTTCATGAGCGTTATGTTATCAGGCTGCAGAAGAAGTTGC AGCATGAGGAGTGGAAACAAGCTAATCAAAGAAGGGTATGTAATGTAACTCTGCTGATTATAGTTTGGTTATTTGATTTT ATGGATCATCAAGTTTGAGATGGATCACTAGTTAAGAAAAATAAATTAGTGTTGAAATAAATTCTTCTTAAATGTTAAAC CATCCCTGAAATAAATGGAATCTGTCACTGAAAGTTCAGATACCAAGTTCAAAGCCTAAGCTATTGCCCACCCTTGTTGG GTTCTGACTGAATTATTACTTATCGATAAGGTTGACATAAACGAGAGTCCAAGATTCATGTTTTGTATCGTCGAAAACAA TGCTTTACATTCGATGAAGAAAACTGAATTATCAAGTTCCTTTAATATCTTTGTTTTTTTTGTTGCTTTGCATGTTATAG TATTGTTGGGGATGTGGTATTCTATTGGCAAAGGATTATGTTATGATTATTTACTAATATGACTTGTATAATGATGGCCT TTGTTGTTTTCAGGTGCTTTCTGATTCTGAAACAGTCCGGTGGTTGAACCATGCAGTTGAAAACATATGGCCCATATGTA TGGAACAAATTGCCTCTCAGAAAGTTTTACTCCCTATCATACCATGGTTCTTAGAGAAGTACAAACCTTGGACTGCTGTA TGACTTTTGCCTTTCCGTTATGTGTCTTTAATAATAGTGCTTGATCAAACAATTTGAATTCTTACAATTTTTTTATAGTT TGAATGTCAATTTTTTATGAATTTCTTGTTTTTGTTTGAGAATTTGACCAAGAGAGATGCTAACACCCCCCCCCCCCCCC TGTTCCTTTTATATTTTTGTTATTTTTATGATTGTGTTTGAGTGTAAAATTGTGACTTTTGTAGTGATCAAATATCGGTA TGCATATATTTTATTCGCAGAAAGAAGCCTTAGTTCAGCACTTATACTTGGGAAGGAACCCACCTTTGTTTACTGAAGTG AGGGTGCTTCGCCAGTGTGATGATGACCACTTGGTATGTGTGTGATGTTTTAAAGCATCATCTCAGGACTGTCCTGTTGA GCAACTGCTACTGATTTTTTTTTTCTTTTTCAGTTTGACTTAAACATTACAGTGTGATCATTGCAGGTTCTGGAGTTAGG AATGAATTTTCTTACAGCTGATGATATGAGTGCAATACTTGCTGTGAAACTGAGAAAGAGATTGGGCTTTGGAATGTGGG CAAAGCTGAACATAACTGGAATGCATATTGAAGGGAAGGTATGGCTGTGGAGTTTTAATTTTACCATGACTCGTTCGTTG AATATTGAAATTTTATTACCTAATATTCGCTGAACAAAATAATGGATTTAAGGTTATATACTGGATGTGCACATTTGCGT GTAAGTTTTTTAGGGAAGTTTAAAATATTAATTGATAGTGGTCCTTCTTACAAGTTATCATTTGTATGAAAGAAAGATTA TGCTTCTTAGACAGTTAGGAGAGAAAAGGAATAGAATAAAATTTGAATTATTTATTTCTTTGTCTTTTGTATAGGTCTTG GTAGGGGTAAAATTTATGCAGACATGGCCTTTTATTAGCCGTTTACGCGTCTGCTTTGTTGAGCCTCCATATTTCCAGAT GACTGTTAAACCTATCTTTACTCATGGGCTTGATGTTACAGACATTCCAGGGATTGCAGGGTGGCTTGTAAGTGTGCCTT GATTTTGTACTGGATGAGAGTAGTTTTATTTTCATTTCTCTCTCTCTCTCTCTCAGTCTCTCTCTCCACATTCTTTCCTT TTTTCTTGTGCTGTGTTTAATTTATGTTATCTTAACTTGTTTCTTTTATCAGGATAAGCTTTTGTCTATTGCTTTTGAAC AGACCCTTGTTGAGGTAAATTTTATTCTGTTCATGCTCTTATCTTCTTGCTTTGTATGTTCTTGTCTTGCTTCTTTGATG TTGTAATATAAATATGCACTAGAGTTCTTCACATCTTTTAGTAGTTTCAGATGCTATGAACTGTTATAGCTTGCTGATTT TTTTCCTCTATATTTTCATGTTGAAATATTTTGCAGCCAAATATGCTGGTTGTTGATGTTGAGAAATTTGTTTCACCACA ACCAGGTAAAACTATATGTCATGCTTTTGAATTTTGTTATAATCTATTTACTTCATAGTCTTGGTGAGTGTTCTATTTCC ATTAGATTTTGCGGTGTGAGTGTCTATCTCTAAACTTAATTCATGTTAGAGCATTATGATTTATGATGTTATTTGATCTA TGTAAGTAACTCTATCTGTTGGGGAAAAGCTTGAGTGTTCTTGCTGTTATGTTGGATCTTATAGTCATTATCATTTCTTG AACTCAGGGTTTAAGCATACGAAAGTAATTCTACATTCCAACATTTTTATCTTTTCTTTTCTCACTTTTTTTCTTAACCT ACTATTTGTAGCTTTGAAAAAAAAAAACCACATCCTTTTTTAGGTTTTATTTTCTAGAAGTTTACATGATTATAAAAGTT GGTCTTATTTTGCATTTCAAGTTTCTATTCCGATAATTATGTTGTCTATTTTAAAAAAACTAAGCAAATGTGGTGTTTTA TCTAAAATCTTCAAATTCTCATTTTCTATCCCAATAATATTTTTCAGAATTCTGAAATCTAGTGGAAATTTAAAAAATTG AAAGATTTTGTAGGATGTATGATATTAGGGTTTGAAGTGAGAGGAATTTGGGATTTTATGATTTTGGATGAATTGTATTG TTGAAGAATGTTTAATATGAAATGTTTGGTGAGGTTTTAGTTGAAGAGTGTTTAATATGATTTCATTAATGTGATTTGTG ATGTTTTTGGGTCGAAAATAAAGGTTTGAGATTTTTAAATAGAGATATTGATGGTGGGACAGTGGGACTTAATTGTTATC ATTTGAAAAATTTGGAATTAAATTCATTTGAAATATAATTGTGGGAACAAAATCATGCATTACTGCATTAGTTATAATAA TTATAATAAAGGGACTGAAAGTGTAAACCTAATTTTTTAGAATGTATGTTTCAAATAAAAAATTGTTTTTTTACCACTTA AAACAAAAGCACAAACAGCCCATTATTTAGGCCATCAGTTTCCGACAACCAACCAATGTTTAGTTCAAACTTAAAATTGG ACATAAGCTTGTCACTTTTACTGGTTTGTGTGGCCAACCTTTTAACCATTGCATTTTTGTACTGTTTTGCATTTTTAAGT ACTAATAATCCATCCATAAATCTTAATGTTACAGAGTCTTGGTTCTCGGTGGATGAGAAGGACCCTGTGGCTTATGCAAA AATAGTTGTTGTTGAAGCATCTGACATGAAGCCATCTGATTTAAATGGTTATCCCTTTCTCTGTGATGATTCTTTGACAG TCTCTAATATGTGTACGTGAGTGCTGACAATTTTTAGTATATTTCAGGATTAGCAGATCCTTATGTGAAAGGTCGTTTGG GGGGATACAGATTCAAAACAAAGATACAAAAGAAAACACTTAGTCCAAAATGGCAAGAGGAATTTAAAATTCCCATATTA ACATGGGAGTCTAGCAACATGCTGGTTATTGAAGTTCGTGACAAGGACCATTTCTATGATGATAACCTCGGGTTTGTTCT GTTCTTAAATTTGTATTTCTATTATGTGGGTTTTTTATTTTACATTTTTGTCCCCAAAATGAACTTCCTCTTGACTTGTC TTTTGTGGTATTATTAAGATATCAATCTTACTATCATTCAGTACATGTGTTAGACAACTATGTGTGGTTTCATGCTGGGA TATGGACATTCATTTATTATTTATGTTTGATAACAACTATATCTTCATTCCAATACCATAATAAGATCCTATGCGACGTT GGGAGAACCATTTGGCTCTCTCCTATATTTCCATCATATTGGCTTCTGTTAGACTTCCTTACTTGCCATTCCCAGAATAT CTGAAATTTATTGATGGAGCAGCATACAACGCGTCAGAATTTTTATGTGTCCTTAACAGTCAACACCATATATTTTCTTT TATTGATGTGTCCTTAACAATTAAAACCATATATTTTCTTATATTTATCAACTTAGTAAGAATTCTAAATGTTGAATGTT TCAGTTTCCCATTAATATTACGATATTTCTTTGTATCTCATTTGACACCTTCTCTATCACTCTGTTTGATCATTAATTTT CTTGCTGTCTGTACTATCCTTTATTCACTGCGTCTGTTTCGCATGAAGTTCTGGCAATTATTCTGTCACTGTCAGCCTAA ATGTTGTACTGTTTCCAGGGACTGTTCTGTGAACATCAATGATCTTAGGGATGGGCAAAGCCATGATATGTGGCTGCCAC TTCAGAACGTAAAAATGGGGAGGTTGCATTTGGCAATAACTATTCTTGATAACAATGAAAAGGTAATTCTCTCTCAATTA TATCGGTACTTGGCAGAATTTGAAGATGAGCATTTTACATGAAGAATAGGATACAGATGAAAATGAAAATGGTTCTAGTG TGCATGAAATCCAACTAGTGGCTCTTACGTTTTCTAATCTGTTGTTGGTGTTTGATTTCAATTTTGAATCTGTACAGGTA GTTGATAATATATGTGGTCAGGAAACTGCAGACATCGAAGAAAGAAAAGATTCCTATGCAAATGAGACTACTAATAAAAG TTCCTTCTCATCTGCTTCATCTGACAAATCCCCCAAGATGGCAGATAACTATGAGCCTGTAGATGTCGATGGTCAAAAGG AAACAGGAATTTGGGTTCATCACCCAGGAAGTGAAGTTTGCAAAACTTGGGAACCAAGAAAAGGGAAGAGTCGACGCCTC GATACAGAAATTCGCGGGGAGCCTAATGATTTAGATGGTAACCGCAATTCAACTGCCTCTGGCCCGTTGAACAATGACAG CAGCAGTCCTGATGACAATACTGAAGATAAACATCTAAGGAGATCATTTAGAAGGGGCCTGCACAATATTAGTTCAGTAT TTCGCAGGAGTAAAAAAAGGGATGATAAGTCAGATCCTATCAGCGAGGAGTTTTCGTCACCACGTGTTAACATTAGGTCA GTCAATGAAAAGGGGGTCGGTGTGCAGTTTATTATGGAGGATCACATTTCTGGCTTTCCCACTGGTAAGATTCAGGTAGA AGGCGGATCAACTGAAGGGAGTGGTCCTGATAGCCCAGCCAAGGGAAATGTAAAGGATATGGCGAAGAATATTTTGAAGC ATGCAGAGAAATCGGCTCGCAGCTTAAAGCATGCTATTTCTCGTAAATCAGGGAAATATAAAGGCGAGTTACCAACAGCT CCAGAGGGAGAAAATGAATCCGACTCTACGGATGATGAATCTCTTTCCGCTCAGTCACCCATAGATGAAAGAACTACCAT TGCTTCCCAGGCCACAGTCTCAGGCAACAATGGTTCCCCCAATTCCAGGGTGAATGTGGTTCAATCAGTTCCGTCTAACA CAGTCTCAGGCAACATTGGTTCCCCCAATTCCAGGGTGAATGTGGTTCAATCAGTTCCGTCTAACACGGCTGTGGAGGGT GAAGCTCCAGTGGAGAACACCAAACTTGAAGTAGTGCCGGAAAAGGCATCCTCCCCTGACAGGTCTGGTGAAGAATTTAT TAAATCTGATCAGCTGGAGCGTGATAAAGAGGAAATTGTGGCAGATAAATGAGATGTTGTCAGTTTCTTCAGCTGATGAA TGGCTTGGCAAGTTTATATTTTGTCCAGCATTCTATAGTTGTGTTCTTGTCTGTACAGCTTTTCACTTTTATAGTCCTTG GGATAGTTAATAGCCATAGGTCATGTAACATATGTTCTGTATCAGGTGCTGGAAAGTTTTATTTTCAGTAGAGGTTTGTT AGCTTGCAAAACTTACACAAGGAAAAAAGATAAAAGATATGCAATCTGTTTTGTCCCCTTACAGCATTTATAGAGTTGGC ATTTACCAACTTTTTTATGGTCCACGGTGTCTCATGCACTTGTAAGACATGAGAAATACAGTATTATGGTTGACCCTTTT CTGTATCCTTGAGTGAGTGTGATACTAAGGAGGCGAGCGATTTGACATTAAGGGCCTGTTTGGTTACGCATTTAATTTTT CAATTAAGTGTTAATATTACATTTTGTGAAGAAAAAGTGTCTCGTAATATATTATTTTCCTATTTTTCATACTTTTTGAT TGGTAAATGAAATATAGAATTGGACTTGTTGGACTTGACTTGCAACGAGCCAACTGAATCTAATTTGCAAGCAGTCATCA TTCTTAGTTTTTTTCATACTACTGAACTAACTGAGCCAGGCAGAATCATAATACTCTAGATGTGCTCGTGTATTAGTTGA GGAATTCACAACAGATGCATGCTTCCTCATGACAGAGCTGACGGAAGTTGAAATAATACCATTCATGTCCTGTTTCTTTG AAAGATAAAATTCCAATACAAGTTGAATTATGCATATAAACTGAATCTAATTTGATGTTCAAAATTGGATACCCAAATCA TACAAAGACATAACTTGAATGCAATCATACCAGCACCAATACAATCCCATCAAAACTCCGTAATTAAGTGTGTTTGAGTG AGAGTAGTACCTCTGGAGAAGTCCTTATGTTAAATCACTTTTATCAGTAAACCAAAAAACAATACAAAGACACAACTATT CCAATACTTCTACTTATTTTGTACACAGAGAATTTGTGTTGGCGTAAGGATCTATACCAACATGAAAGCACATTCAATCC AATAAACCCGTTCATATGCACTCCATTTGAACGTGTGTTTTCTGTTTCATCCTCTTCTTGAAATGTCCAACAACTGAAAT CCAAACACAGATAATGGAGGATTTATGTTATATTATGATCAGGTTAAGTGGTTACAACCCTCCAAAATCTCATCAAGGGA AACACAAGTAGATTCATAATTTCTTGGTTTTGATACCGCGCAGTTGACAATGTGCCTCCACATCCCCATCCTGGGCACAA AACCCTGCCTCACCATCTGCCTCAGAGCCCAATCAACCTCCTCAGTCCGACGGTGCCGGCACAGTCCCACGACGAGCTGC TTAAACGACACGAAACTCGGAACAAAACCCCGCGAAACCATCCCCTCCACAACCTCCAACGCCTCAATAAACCTCTTTGC ATCGAGCAACCCATACAAAACCTGCTGGTAAGAACCCACATTAGGATAAAACCCTTTCCTCACCATCATATCCAAAACCT CCTTCCCTTCCTCCCCTCTCCCCTTCTTCTTCAACCCCCCAATCAAAACATTGAACACCACAACATCAGGACAAACACCA CACTTCTCCATCTTCTCCAACCACTCGAACGCCTCCTCCACCATCCCCTTCTCACACAACCCATGCATCAGCGTCGAAAA CGTCCTCACATTCGGCTCCAGCCCCGACTTAGGAAATTCATCAAACACCTTAACCGCAGCCGAAAGCTCCCCTTGCTGGC ACAACCCCTTAATAAGAATATTCATACAGCACGCATCCACCTCAACCGCAAGCCTCGGCGCAGCCTCATAAACCTCACCA GCAACATCATAAAGCCTATTAGCAACAAGCACATTAAGTACAAAGTTAAACGTCCGCCGCGACGGCCAGCATTGGAAATC CGGCATGGAAAGAAGCGTTTCAACCGCCTTATCAATGCGGCGGGCGACATGGGCGTAGAGCTTGATGAGGGTGAAGAAGA AGTCATCGGAGAAGCTTCGGCGTTTGAGGGTTTGGTGGAGGAGGGTGTGGATGGGGTCAAGGAGGTTGGCGTGGGCGAGT TTGGTGATGAGGGAGGTGCAGAAGGGTTCAGTGGGGTTGAAGTCTTTGCGGGCGGTGTAGAGGTGGAGGAGGGTGACGGC GGAGGAAGGGTGGTTGAGGGAGTTGCAGAGGGTGGTGGCTTGTTTTGGGGTAAGCCAGTCTTTCTGTTGGAACCTGGCGA GAATGGCAGTGTCTCTGTCTGTGTTTGGTTGTGTGCAGAACCACAACCGTGGTTTGTGGTGGGGAGTGAGAGGGGGAACC AGAGTACGGGCTCGAGAAATCATCTTTGCCCGGGAAAGCATGGTGGATAGAAGTTCTGGTTTTATGTCAAAGTTTG
CDS sequence (LotjaGi3g1v0147400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATATAACAGAAATTTCTATCTTACATCATGTTGGGATTGTGCTGATTTGCATCTGGTTGCTATCTGCATTCAATTG CTGCCACCCAATTGCTTATTTTATTTCTCTGATCTATATTTATCTGGTTCATGAGCGTTATGTTATCAGGCTGCAGAAGA AGTTGCAGCATGAGGAGTGGAAACAAGCTAATCAAAGAAGGGTGCTTTCTGATTCTGAAACAGTCCGGTGGTTGAACCAT GCAGTTGAAAACATATGGCCCATATGTATGGAACAAATTGCCTCTCAGAAAGTTTTACTCCCTATCATACCATGGTTCTT AGAGAAGTACAAACCTTGGACTGCTAAAGAAGCCTTAGTTCAGCACTTATACTTGGGAAGGAACCCACCTTTGTTTACTG AAGTGAGGGTGCTTCGCCAGTGTGATGATGACCACTTGGTTCTGGAGTTAGGAATGAATTTTCTTACAGCTGATGATATG AGTGCAATACTTGCTGTGAAACTGAGAAAGAGATTGGGCTTTGGAATGTGGGCAAAGCTGAACATAACTGGAATGCATAT TGAAGGGAAGGTCTTGGTAGGGGTAAAATTTATGCAGACATGGCCTTTTATTAGCCGTTTACGCGTCTGCTTTGTTGAGC CTCCATATTTCCAGATGACTGTTAAACCTATCTTTACTCATGGGCTTGATGTTACAGACATTCCAGGGATTGCAGGGTGG CTTGATAAGCTTTTGTCTATTGCTTTTGAACAGACCCTTGTTGAGCCAAATATGCTGGTTGTTGATGTTGAGAAATTTGT TTCACCACAACCAGAGTCTTGGTTCTCGGTGGATGAGAAGGACCCTGTGGCTTATGCAAAAATAGTTGTTGTTGAAGCAT CTGACATGAAGCCATCTGATTTAAATGGATTAGCAGATCCTTATGTGAAAGGTCGTTTGGGGGGATACAGATTCAAAACA AAGATACAAAAGAAAACACTTAGTCCAAAATGGCAAGAGGAATTTAAAATTCCCATATTAACATGGGAGTCTAGCAACAT GCTGGTTATTGAAGTTCGTGACAAGGACCATTTCTATGATGATAACCTCGGGGACTGTTCTGTGAACATCAATGATCTTA GGGATGGGCAAAGCCATGATATGTGGCTGCCACTTCAGAACGTAAAAATGGGGAGGTTGCATTTGGCAATAACTATTCTT GATAACAATGAAAAGGTAGTTGATAATATATGTGGTCAGGAAACTGCAGACATCGAAGAAAGAAAAGATTCCTATGCAAA TGAGACTACTAATAAAAGTTCCTTCTCATCTGCTTCATCTGACAAATCCCCCAAGATGGCAGATAACTATGAGCCTGTAG ATGTCGATGGTCAAAAGGAAACAGGAATTTGGGTTCATCACCCAGGAAGTGAAGTTTGCAAAACTTGGGAACCAAGAAAA GGGAAGAGTCGACGCCTCGATACAGAAATTCGCGGGGAGCCTAATGATTTAGATGGTAACCGCAATTCAACTGCCTCTGG CCCGTTGAACAATGACAGCAGCAGTCCTGATGACAATACTGAAGATAAACATCTAAGGAGATCATTTAGAAGGGGCCTGC ACAATATTAGTTCAGTATTTCGCAGGAGTAAAAAAAGGGATGATAAGTCAGATCCTATCAGCGAGGAGTTTTCGTCACCA CGTGTTAACATTAGGTCAGTCAATGAAAAGGGGGTCGGTGTGCAGTTTATTATGGAGGATCACATTTCTGGCTTTCCCAC TGGTAAGATTCAGGTAGAAGGCGGATCAACTGAAGGGAGTGGTCCTGATAGCCCAGCCAAGGGAAATGTAAAGGATATGG CGAAGAATATTTTGAAGCATGCAGAGAAATCGGCTCGCAGCTTAAAGCATGCTATTTCTCGTAAATCAGGGAAATATAAA GGCGAGTTACCAACAGCTCCAGAGGGAGAAAATGAATCCGACTCTACGGATGATGAATCTCTTTCCGCTCAGTCACCCAT AGATGAAAGAACTACCATTGCTTCCCAGGCCACAGTCTCAGGCAACAATGGTTCCCCCAATTCCAGGGTGAATGTGGTTC AATCAGTTCCGTCTAACACAGTCTCAGGCAACATTGGTTCCCCCAATTCCAGGGTGAATGTGGTTCAATCAGTTCCGTCT AACACGGCTGTGGAGGGTGAAGCTCCAGTGGAGAACACCAAACTTGAAGTAGTGCCGGAAAAGGCATCCTCCCCTGACAG GTCTGGTGAAGAATTTATTAAATCTGATCAGCTGGAGCGTGATAAAGAGGAAATTGTGGCAGATAAATGA
Protein sequence (LotjaGi3g1v0147400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDITEISILHHVGIVLICIWLLSAFNCCHPIAYFISLIYIYLVHERYVIRLQKKLQHEEWKQANQRRVLSDSETVRWLNH AVENIWPICMEQIASQKVLLPIIPWFLEKYKPWTAKEALVQHLYLGRNPPLFTEVRVLRQCDDDHLVLELGMNFLTADDM SAILAVKLRKRLGFGMWAKLNITGMHIEGKVLVGVKFMQTWPFISRLRVCFVEPPYFQMTVKPIFTHGLDVTDIPGIAGW LDKLLSIAFEQTLVEPNMLVVDVEKFVSPQPESWFSVDEKDPVAYAKIVVVEASDMKPSDLNGLADPYVKGRLGGYRFKT KIQKKTLSPKWQEEFKIPILTWESSNMLVIEVRDKDHFYDDNLGDCSVNINDLRDGQSHDMWLPLQNVKMGRLHLAITIL DNNEKVVDNICGQETADIEERKDSYANETTNKSSFSSASSDKSPKMADNYEPVDVDGQKETGIWVHHPGSEVCKTWEPRK GKSRRLDTEIRGEPNDLDGNRNSTASGPLNNDSSSPDDNTEDKHLRRSFRRGLHNISSVFRRSKKRDDKSDPISEEFSSP RVNIRSVNEKGVGVQFIMEDHISGFPTGKIQVEGGSTEGSGPDSPAKGNVKDMAKNILKHAEKSARSLKHAISRKSGKYK GELPTAPEGENESDSTDDESLSAQSPIDERTTIASQATVSGNNGSPNSRVNVVQSVPSNTVSGNIGSPNSRVNVVQSVPS NTAVEGEAPVENTKLEVVPEKASSPDRSGEEFIKSDQLERDKEEIVADK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
Phobius | 1 | 11 | 11 | - | – | |
PANTHER | 5 | 702 | 698 | 0.0 | – | |
PANTHER | 5 | 702 | 698 | 0.0 | – | |
Phobius | 12 | 42 | 31 | - | – | |
TMHMM | 12 | 43 | 32 | - | – | |
Phobius | 43 | 769 | 727 | - | – | |
ProSiteProfiles | 71 | 264 | 194 | 17.602 | ||
Gene3D | 272 | 401 | 130 | 3.7E-32 | ||
SUPERFAMILY | 278 | 401 | 124 | 3.59E-30 | – | |
SMART | 285 | 382 | 98 | 9.0E-18 | ||
ProSiteProfiles | 287 | 367 | 81 | 13.609 | ||
Pfam | 287 | 385 | 99 | 2.2E-19 | ||
MobiDBLite | 421 | 453 | 33 | - | – | |
MobiDBLite | 428 | 444 | 17 | - | – | |
MobiDBLite | 473 | 496 | 24 | - | – | |
MobiDBLite | 473 | 558 | 86 | - | – | |
MobiDBLite | 497 | 515 | 19 | - | – | |
MobiDBLite | 540 | 555 | 16 | - | – | |
MobiDBLite | 587 | 769 | 183 | - | – | |
MobiDBLite | 613 | 629 | 17 | - | – | |
MobiDBLite | 658 | 727 | 70 | - | – | |
MobiDBLite | 740 | 769 | 30 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | Lipid binding | Interacting selectively and non-covalently with a lipid. |
Expression pattern of LotjaGi3g1v0147400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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