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Field | Value |
---|---|
Gene ID | LotjaGi3g1v0183800 |
Transcript ID | LotjaGi3g1v0183800.1 |
Related isoforms 3 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Outer envelope protein 80, chloroplastic; TAIR: AT3G44160.1 Outer membrane OMP85 family protein; Swiss-Prot: sp|Q9C5J8|OEP80_ARATH Outer envelope protein 80, chloroplastic; TrEMBL-Plants: tr|I3S6C8|I3S6C8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0183800 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:25740156..25750800) extracted from Lotus japonicus Gifu genome v1.2.
TTTCTATCATATCAAACAACTTTTCAATCTACTATATTTCTTACCTCTTTGTCATCGCTCATCTTCGCTCTTCCCTACCA AACAAAATATTAACATCAGTGTCGAGGATCAAAATCGCTCGTTTTAAACATGGGGGAGAGACTTCACACAATGGTGAAAG ATGAGGGAGCAAATGTGCAATTAAGCCTAAAATTTTACACTCATGAGCTGAGTATGATAAGCTTATGGTTTCCTATTGAT TTAACAAACTCGTGATCAGATTAAGACATGGTAGCATATCATATCATATCATCTTTATCAGGACCAAGAAACAGGAATAC TGAAAATTTTCAGCAAATGTACAAGATTGGCAACTAGTCTAAACAAATACTTATTTATGGGTGCAAGTGTCAATATGAAC TTATTTTCCTTGACAGAGTAAATGCTAACAAGATCGACAGAAAGAGTGAGAATCAGAAGGCAGGTGACATCAGAATTCAG AAAACCGTTCTAATAATTAATAACCATAACATTTGATATTCACTTTTAAATAGTCTCCCAAGGATAAAAGCCTTCAATCT TCTCTTGCAATTTAAGCTACATCTGCTACTTAACAAATACTACTGGCTTCCTCGGCTTCTGCAACATATGTATTACATTT ATGGAGGGTTTGTTCAGGCAACATAACCCTGAAAACAGCATAATGATGATTTAAACTCTTTTCTCCCTGTAATCTATGAA CACTTCCCAAAGCACCAGCGTTAGGGTTTGGAAACCTATAAAATATCCTCCTAATTCGCTGATGGACAAGGGCCATGGCA CACCTGAAATCATAGTGGAATGCAAATACATCAGAAAACAACTACTTCGAAGAAGTTTTAACCATCAGAAAGTGGAACTT CATGTAAAAGGCGAATCGGAATTAGAGAATTTCTGCCATTCAAGGAAAGAGAATCAAACTGCAATCGCTAGACTCACATG AGTATGCAAGAATCAAGATCATTTCAGACTTGAAAGAAATTCAACAAAGACATAAGTGGTTCAAAGGTACGGAAATATAT TGTCTACAAAGCTTACATTATGCAAGGTTCCCAAGCAAGATATATGTCATAACCAGTGCATAGGTACGGTCGTGCTGACA GCTGAGTAGAAGTTTCATTATGACCATTCAATTTATCATTATCCTCAACCTGAAACGCCAAAATCCAATACCATAATAAA GCTTTCAACATAATCCGTTTGAAAATTATCAACAAGTATAATCAAAGGTAAATGCCATTGCATATGCATTTCATGTTTCC ATAATGCCATTGTTGAATTTGGTGTGAGGTGCTTCATTAGATCTAGATTACCAACAACGGGTAATTGTCCGTGTTCCATA CGGTCAATTCTTCGGAAAGCTGTAGCAAAGGATCATATACATATCAAGTAAATGCATGATTCTACCTCCTTATCTCTCAG CACAATATTTAATTAGCCAATTGCAGACTTAATACAAAACATAATCCAGGAACTCCATGAACTATTAAGGATATAGAAAA TCATAAACTTTCCAACACAACAGGTTACTCAAAACTAAGAATGCGACACATGGAGCTCAATATGTTATCAATATTTTTGG AGTGGAATGGTTAACACTTCATACAAATAGGTAGTTTCAATTGGTCATTAAAGTATACACTAGCCAGGATCCTTAAATCG ACCTAATATCAATGTAGATAAACTTACAGTTGCGCAAACAGTTTTCTGTCTCTTTGCAGGAAAGCTTGTGCAAGAAGGAT TCTCGTGATCCATTTCCAGATACTTTTCTTCACTATTCCCCTCACTAGGAAAAAGACATCTATCCCTAGCAGCAGATGAT TCTATAGCTACAATTGCAGCATGTCGCAAAGGATGCCAATCATGTGAACTCTGTGAATGTGATTGCTGCTCGGTCCATTG CCAAGGATATAAGCAAGCAACACCTGTATCCCGTTGTTTGAGCTGATTGCAGGAACTATTTGAATACAACGGTTTGTCAG GATCAAATCTATTGGAAATAGGATGGGAACTTAATAACTCTGGCTTTCTAGAGAAGCTATCATCTTTGCAAGTGTTCCAA GCAAAAACCTGATCACGTGCACTTGAAATAATTTGCTTAGCTGAAGGGTCCACTATCACTGCAGCATTGACAACCTAAAT GGATGAAATGTCAATTAAGTAGAAGTTGATAGTGAAATTTAATAGTAGGTCAAAGTTACCCCGTATTAACTCAGCAAGGG ATAGAGTGAGTCAGTGGACCCAACAAAACATAGTTCAAGCTGAACAACAAACGAATAATAATAATATAAAAAAAACTGAA GTTAAGCATGTACAGTCAGACATCATTATTTCTCATGCACAAATTGAATGAAAAATCAAAATTGGCATTTACCAAGCCAT CGGATGTTGCCAACTCAACAGCTGATTGCATAAACTTCAAAATTGATTGCGAGTCCTCCTCACTAAATCCAGTAATACCA TCAATGTTGCTGTAATTTGATTAAAAATGTTAGTATTCTCATCCAGTAAGATTATTGACAAAAAAGAAACCAAATAGCAA TTGAAGATATCCAATATGTGTCATCAACAAGAATTCAGATTTTAGAACCCCCTCCCCCCCAGAAAAAATAAACAATGGTC ATAAATTTACTGTGCCAAACAATCATCACGATGCACATGCTCCTAAAAAATCCACCATGTCTCCAATATTTACACAGTTG AAAACTATAAGGATCCCCTTTGGCCCTTTCCCCCAGTCAAACTCCCAACTCCGCCAATTTTTATCCACAGAATAAACAAT ACAAACTTCATACAAACGACTGGAAAATCTACTACAACAGACACTATAATTACAAGATATATTATAAGATTTGTAAACAA GTCTAAGTTACTAATGAAAACAGAAGACAATACACATTGGATATTATAAATGAAGCCAGCAGGTTTTGAATTTTGACAAA AGGAAAAAATGATATTACAAACAAAAAGATAAAAGAATAACGATATGAAGCTTACTAAGTCCTTGGATGATAAGACGTTG GCCAAATTTTGCATTGCTCTAGCCACTCTTCTTTTGATGTTGCAGCATATTTGCAGACCTAAAGCTAGTTAAAGCCGAAT TAAATGCGCAAACTAACCTAGGTTATAATAAATAAAAAAGAGCTCTTAGGGTTTCAAACCAAAAAGCTGTTAAATTAATA ATTTTATTTTCTCTTCATTGATAGTAGACCTTAAAATATTTGGATGGCCATTTAACTAAAATAGTCCTAGAGCTTTGCAT ACAAGTTAACGTTTGATAAACACCATTAAACTAAAACTCAATTAACATATAAACTACTGAGTTCCTATGTTGAGGGTTTG CTGTTTCTTTTAAACTGATGATTTATAGAGTTTGTGTGTGCGTAAGAGTTTCGCTCAACAGAGATAAATGAACTTTTAAA CCCATTGACACAATTTTTTCTTTTAGCTGTTTTCTCTTCCGAAAACGTTAAATCTCATTTGTACTCACTACTCAAGCAAA CGGAAATCCAAACATAAAAAGAAAGCTTTAGAAGACATAAAAAGAAAGAAGAAATGCTAGTGCTTCAAGGTTAAACTAGT AACAAGATAAAATATGGAATTAGTTAAAGGAAAAAGAAAAGTAACCAATCACCCATTCCACTATAAATAACATATAGCTT TGAGGATTCATCACAATCACAAAAATAAAACTAAAATAAGTAAACATTTGTCATAACTGTTTAGAAATCAAGAACTTTTA CATTCTCCATATCATTTTCACCCTATATCTTTCTATGATCAAACCATAAGCATAGACTAGTGTTTAAAATAAAAATAAAA ATAAATGAAGACCCACTTTTGTGATAAAAGGACTCAACTGATAGGAACTGATCAACTCGTGAAGATGAGGCGGCACACTA TCCGATTGATCGTCACCCTCAGGGGCCAGGCACAAGATCACTGATAGCTGTACCTGTCCTGTCAAACATCCCCAGTATCA CCAGCAACAGACTTTGTCTATTAGCAACATGTCATATTATAGCAGAATAAAGCAATATAAACAGTATGCTCATATAAAAT AGGCATAATTCCATATTTCCAATGTTAGTAAAACTAAAAAGTTCTAACTAGTTCCAACAGAAAGGATGTAAAATGCTTTG CATTATACATCCTTCATTACATCATCCATAAAACAATAAAATTCCACACAAACACAGACACATAAATTCCAATAACAATA CTTCAGAGTTCAGACCCATGAATCACTGTAATGTAACACCTAGTTGGGAAAGTTAGTTAGGAATATCCACCTCCTTCCAG AACCTTCTTCTGAATTCGTTTCACATGACGGAGATCTTCGAGGGGTGCTACTTGATTCAAACGCCTAACAAGAAAATACA AGCAACAACTTTCCACATGTTAGTTCACGAAGCATGAACAGCTCACAAAAACATTAAGGTTTCAACGAGACCTAACCTCA CAATTTGGTTCGCATGCTTTGGGTTGATGGCCGAAGCAAAGACACTCTCTGCACACAAAGGAACAAAACAAACACCAATG TTTCAATTTATGGAATTTGAGAAAGAAATGAAAAGCTTGGAGCAAATGGTTTTGATGATGTGACCTGTCGGTTGATTGTG AAGGTCATGTGGCTGCTCCTCTGGGATGTACATAATCATGTGGTTGTTCGTCATTTTCTGCTTTCGCTCTGTTTGTTCTG AAACGGGAACTGAAGTTTTATTTTCATGCAAAGGTTCATACTTCATAACAACCAGCAAAAAAGGGAAACAAAGAAACTGA GCAAATATGCAGTACTTCCAGTATATACTGACAAATATGTATGTGTGTATGTATATGCAGTACATAAAACCTAGGGAAAA TTGCCCTCATCTCCCCTCAAGTTGTGGGCATAAATGTAAATGGCTGAACATAATTGTGAACCAGTGTTATCAATTGCGGA TGGCGGTCCATGGTCGAAAGCCAAAATACAGCCATGGTGGCCTTAATAAAAAAATTATAAATATATATACAATTATACAT ACACACATTAAAAAACCTGCATAATGCAATTATACAATACAACAAATAAAAATTCTGCTAACTAGTAACAACTTATATAA TAAAAAATAGGCTATAGATATTAGATACTAGATAGATATTAAGTCCCATACTCTCATAGAGCATATTACATACCAAAACA TGATGACAAATTGAAGATTTGAAGTTTGAATTGACATGAAAAATAAAGTCAAAAGAGTATAATTTAATCTAAATAACTAA TCATCCAATTTTAATGTAGTGTAGTCAAGTTGAGTGCCAATGCCATCTAGTAACAGAGACTTAACTCTGTCTTTAAACAG AGAAGAAGAACATGAACGTTGTAACTTGTAAAGTCCATAAACGCCCACCAGACCATGTTCAATCGCAGAAAGAGTACCCA CGCGCACCATCCCGACACCCAACGCTCAATCCCCAGAAGCTACATTAACTCAATTAGTTTTTCATCCCCTCAGGTTGAAG ATGGGTGAAATATATCAAATTATCAATCAATCATGGATTTTCAGAAACCCTCTGATTCTGAAAGAGAAAGGACAAGAATT AGGGAAAAAAATAGAGAAAAAATACACACCTTACCTTACCCAGTAACCCTCAAAGAGAAAGGAGAAGCAGAGCTGCAGAG ATAGAGAGGCAGAGGAGCCGGTGGACTGGTGGATGGTGGTGCGCCGTGCGTGTGTTTGACGGCCAGACCTAGGGAGCGAT TAGTGATGAGAGTGCGAGAGAAAGAGGGTGAGGCTGAGTGACAGACAGAGTGAGAGAGAGAAGAAGTAAGTGACGCGGTG GTGTTCCAACGATAGGTGGTGTGCAGTATTGATTTCAAAGATGAGAGGAGTGTGTGAGAAATGGGCCGAGCCCGAATGAG TATTGGGCCAGTCACGAGGCCCAATAGATTCATGGTGGCAGTGGAGTGCGGAGAAGCAAAAGGGATAACACAATTTGGAA GCTACGAACAGAATTGTTCTGTCGTTGCCAATGTCTCTCTCTCTCTCTCTAGTATAATAGTATTTCAAAACGTTGGGGTC TCTTGTGTTTGGTTCCAGATTTTGTGAATTTGATGGTTGATGCTGCATTTTTAATGGGATGGGAGCTCAGAAGAGCATCC ATGCTGGCAAAGGTTAGAAGATATAGCTTCTTCAATTTCTTTCATTTTGCTGCTTTACTCACTCAATTGCATTCACCATG TTTTACAGCCAAGATTGATGTTAATGTTGATTTCACTCACAAGCTCTGTGCTTCTTTGATGTTTCCTACCCTCAGGTTCC AACTCACTCTTTTTTTTTATTTTTATTTTTAATTTGTGTTTAATCATTTTCTGTTTTCCTCTAATAGGAGTTATGAAAAT CCTCTTAGACTGGTCATTGGGAGGTAAGATTCTCAGTTTGCTTCTTTTTAATTATTATTATTATTATTGGATGGAATAGG ACCTTGGTTTGGTGTTATGCATTGGGTTGTAGATGAGGGTATTGGTTCTACTAGAATTGTGTAATGAATAGTTCTACTTT TTTTTTCTGATTAGTCTCTGCATCAAGCACCCAAACTTATTTGGTGGAAGTGAGAAGCTTGATGTTTCATGGGACAAGGG TTTATATGATTCAAATATCTTAGTCGCTTATAGAAGGCCGCGTCCAGAATGGCTTGCTCAGCAGTCTTTTGTATTGCAGG TAGACTGTACTTTCCTATCATTTTATTCTATGCTATGAGAAATTATGCTAGGCCAGGCTGTACAATAAACTTATGTTCAA TGGATTTTTCTTTGTGAAACCTACAAATTTGAGTAAAATTTTATTGCAGAATCTTATAGTCTCGTCCTTTTTCTTCTTTC AGCATTCTCTTTCACCTGAGATTGCAGTTCATGGTATCCCTATAAACAATTTCTCCCGATCTGGAAGTGGAGGTGTAAAT TTATCTAAATTATCAGTGGGGCTGGACCTGAAGGAACCTATGAGTACAAAATGGAGCAGCACAACCAGCATAAAATTCGA GGTTCAGCTTCACTTTTCATGAAATTGACATAACATCAAAGCACAGTGTGCATGTGCTTCCTTGTTTTGCATTACCCTCT GATTTGGTTTATAGGCAAAGTGGAAACTGACATTGTAAACAATCATGCAGCATGTTCGTCCATTGAATGATGATGGTCGT GCTATAAGTAGAGATTATGATGGATTTCCTCTGACTTGCAGGTAGTCAAGAATTCTAGTATTGCAGTTTTCAAAATATTA ACCTGATTTTGACCATATGATGTACATTGCTTGTGCAGTGGCAGTACACATGACAGTATGGTAGTGTTAAAGCAAGAATC TCGATTTGCCAAGGCAAATGACCGTAGCTTTTTTCATGTAATAAGATATACTCTTTTTTTCACCTTGCTTTTTACTTCCT ATTTATATGGTTGTGAATCAATTAGTTGCATTTTTTTTTATCACAAATGAACTAGTTGCATATGTATTCCACTGACTGAA TGCCTGGTCTTTTCAGTTTAATCTTCAAATAGAACAAGGTATTCCAGTTCTTTCCAAGTGGATACTTTTCAACCGATTTA AATTCGTTGCTTCAAAGGGAGTCAAACTTGGACCAGCATTTCTTTTAACAAGGTTGGTATTTTCTAGCAGTTTAAGAAGA TAGAAGTTTTCTGTTTGACTCCGCTATTAGGGAAACAACCATGTGGAGCAGGATTTATATTAAAATTCAGTGCTTGGATT CAGATATATAACACATTGATACAAACTTTACGATTAACCTGAAATTCAATTCCCCTATTTTCGTTTTTCTCTTGTTTTGT TTGACAAGCAGTTATCTTTGACTATGTCATTTTTTTCACTATCATCCTTACCTTTTCTTCCAACAGACTTACAGGTGGTT CAATTGTGGGGGACATGGCTCCTTACCAAGCATTTTCCGTTGGAGGGCTTGGGAGTGTGCGAGGCTATGGTGAAGGAGCT GTTGGATCTGGGAGATCATGTTTGGTGGCTAACAGTGAACTGACGCTCCCTTTGGTATGTATTTCAATAGCTTTACGAAC TGCGATCTTATAATGTTAAATTGGACAGATATGTAACATTTTCCCCTTGAATATTCTTATTATGCCAAACGAATCTTTCT TTGTTGAAGAATTTGCTTTCCTTGAAGTTTCTTTTTCTTTTTTGAATATCACTTCCTGCTATGTCTAGTAAGATATTGGT AGGGACGACCTCATGCTCACAATCTTTGGGAAGAACTGATTTTACAACTATAGTTTGTAATATCAGGCATCTCATGTTTG AAGACCTAATATTAAGTGTAATATCTTCCTTGATAAATGTAGAATTGTTAGGTTATAATTTATGTTGAAACTTTCACTTT TCTCCTCATTACTGATTTAAAAGAGATCAATTTTTTTTTTCTCATGAGCCTTTGGAAATGAATCCTATCCAGTGTATCCG AGTCAGTCTATCCTTCCCTCCCACTATGCTTCCACAAGTTACAACTAGAAATTCCTTGTATATGATTGTAATTCCTGAGA TCTTTTATTGCTAAGTATTCCTAGCCTTTACTAAACTACTTGATGTCTTCTTTACACAGACTAAGATGTTAGAAGGTGCC ATTTTCTTGGATTGCGGAACAGACTTGCGGACTGGTCATCTTGTACCTGGTGAGCAATATCATTCTGCTCAGAATCAGAT ACTCAAATTACTTCCAAATTTTTTAATGTTCTCTTTCTTGATTATCTTGCTAATATTTATATGATGTATCTACAACTTTT AGCATAAATAAGCGTTACATTTTTTGTCTTCTGAGGAGACTTAGTTAAATTTGTTTGTTCAGTGAGGCAAGTTCTTGAGA TAGGGTTCTTTTGCTTCAGATTTTTCTGATTTCATGCTTTACCAAATTGAAATTGATTACCGAAATAAAACTTTCTCTGA CTAAAAGTCACTTGTTTCATGTAGTACCTTTTTTTATGAAGTTGATTTATGTAGTACATTCAAAAGTCTATCTATTACCG TCAAGGTGGGTGAAATATTTACAATTATGATAGTGGTATTCGAAGAACAAAATAAAAAAAAAGGTTGATTGGGGTGTGGA GAGTTTTTTGCACTGGGGAATGTTAATTGAAACACTGGAGTCATCCAAAATTTGACCAGTGAACATGAAGTTCTGAGAAC AAATTTTGCTTCTGCTTAATTTTAAATTGAACTTTTCTGTGGTAGGAGACATTCAGTTTAGTTCTTTCATGTATTCTAGT ATTGACTTGTTCAAGTCTACATAAAAGCTCCATTTTATTGAGTTAGTGGGAAAAGGGAGCTTAGGTAGGCTAGGCCAACA AGAACTGAGTAAATGATTCTTGTTGAAGAAGTCTCTAGGACCATTTTGTGTGGTAAAATAAGGGCTATTATTGTAAGGAA CATAGAGCTGTGGCCAAAATGTTCCTCGATATTTAGAGTTCCGTCAGAGTTTTATGATGAGTTGGGTACCTTATGCCACA ACATCAGCCATTATATTCCAGTGACAAGTTGCTGTGTTTTCATTGACATATTGTGTTTTTCATAGCTGCTGGTTTGCTTT GCTATGCTATTATCTTAAATTGAACTGCTTGATCATGTTTAGGCTCACTGCACATAATTTTTAAGTCTCTAGCCTAAAAC CATATCAATTATCAAATGTGCTCTCATGGTGTTGATCCCTTGAAAATTCAGGAAATCCAGCCTTGAGGCAAGGTAAACCC GGATCTGGTGTTGGATTGGGATATGGACTTCGATTTAAATCACAGTTTGGTCATTTCCAAGTTGATTATGCCGTTAATGC GTTTCAGCAGAAAACTCTCTATTTTGGCCTCAGCAACCTTGCTTCATGAGATCCTTATACCAAGAAGTTGCAGAACTCTA GTGCATTCCTATAGTCCACGACTCCACGGATCCTTTCCTATTTATCTGCAGTTCATCATAACGTGACAAAGTCCTATACT CATATGGGAGATGGAATGGGGAAGCAACAGAAGCTCCAATATTTTGTCATACAATTCACAGCCTCATCTATTGTATGAAC TGCACTCTTTTTTTTTTCTAACTCCACAGTATATTTGGCATGTGGAGAGAGAAATCTTTGCTATATTCTTTTTCTTATAG TTCATGATCGTTGGAAATTTTATTGGCATTTTTGTGAGGCTTGTTTTTGGTAAATGGGTGCAGAAAGATTGATTATTTTT TGTAAATTGCCTTCAATCTAAAGGAGATAAGATTGTATTCTTTTAACTTTGTAATCAAGCTAGGAAAAGAGTCTATGGTG CATGTTTGGACTTGGGTTACATTTCTACCATTTAAAAAATTGAATATACGAGGTCAGTGAAATTATGATTACTAAGTAAT AATCAAACTACATCTACTAAAGAGATTACTAGGCAAGCTAATATATTCACATTTGATCCTTACTTGGATCCTTCTCCTAG CAGAATAGCCATGATTTGGTATAACAGGCATTGGTGTAGGAAGCTTTGGTAGAGCTAACAACCTTTCAGATGCACATGGG TCTAGGCTATTGGGAGATGGATCCAATAGCTAGACTAACAACCCTTCAGTTTCTTGATGCTAATTAATTTGGTGCTTAGA GAAGG
CDS sequence (LotjaGi3g1v0183800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGCTCAGAAGAGCATCCATGCTGGCAAAGCCAAGATTGATGTTAATGTTGATTTCACTCACAAGCTCTGTGCTTC TTTGATGTTTCCTACCCTCAGGAGTTATGAAAATCCTCTTAGACTGGTCATTGGGAGTCTCTGCATCAAGCACCCAAACT TATTTGGTGGAAGTGAGAAGCTTGATGTTTCATGGGACAAGGGTTTATATGATTCAAATATCTTAGTCGCTTATAGAAGG CCGCGTCCAGAATGGCTTGCTCAGCAGTCTTTTGTATTGCAGCATTCTCTTTCACCTGAGATTGCAGTTCATGGTATCCC TATAAACAATTTCTCCCGATCTGGAAGTGGAGGTGTAAATTTATCTAAATTATCAGTGGGGCTGGACCTGAAGGAACCTA TGAGTACAAAATGGAGCAGCACAACCAGCATAAAATTCGAGCATGTTCGTCCATTGAATGATGATGGTCGTGCTATAAGT AGAGATTATGATGGATTTCCTCTGACTTGCAGTGGCAGTACACATGACAGTATGGTAGTGTTAAAGCAAGAATCTCGATT TGCCAAGGCAAATGACCGTAGCTTTTTTCATTTTAATCTTCAAATAGAACAAGGTATTCCAGTTCTTTCCAAGTGGATAC TTTTCAACCGATTTAAATTCGTTGCTTCAAAGGGAGTCAAACTTGGACCAGCATTTCTTTTAACAAGACTTACAGGTGGT TCAATTGTGGGGGACATGGCTCCTTACCAAGCATTTTCCGTTGGAGGGCTTGGGAGTGTGCGAGGCTATGGTGAAGGAGC TGTTGGATCTGGGAGATCATGTTTGGTGGCTAACAGTGAACTGACGCTCCCTTTGACTAAGATGTTAGAAGGTGCCATTT TCTTGGATTGCGGAACAGACTTGCGGACTGGTCATCTTGTACCTGGAAATCCAGCCTTGAGGCAAGGTAAACCCGGATCT GGTGTTGGATTGGGATATGGACTTCGATTTAAATCACAGTTTGGTCATTTCCAAGTTGATTATGCCGTTAATGCGTTTCA GCAGAAAACTCTCTATTTTGGCCTCAGCAACCTTGCTTCATGA
Protein sequence (LotjaGi3g1v0183800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGAQKSIHAGKAKIDVNVDFTHKLCASLMFPTLRSYENPLRLVIGSLCIKHPNLFGGSEKLDVSWDKGLYDSNILVAYRR PRPEWLAQQSFVLQHSLSPEIAVHGIPINNFSRSGSGGVNLSKLSVGLDLKEPMSTKWSSTTSIKFEHVRPLNDDGRAIS RDYDGFPLTCSGSTHDSMVVLKQESRFAKANDRSFFHFNLQIEQGIPVLSKWILFNRFKFVASKGVKLGPAFLLTRLTGG SIVGDMAPYQAFSVGGLGSVRGYGEGAVGSGRSCLVANSELTLPLTKMLEGAIFLDCGTDLRTGHLVPGNPALRQGKPGS GVGLGYGLRFKSQFGHFQVDYAVNAFQQKTLYFGLSNLAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 2 | 359 | 358 | 3.2E-212 | – | |
PANTHER | 2 | 359 | 358 | 3.2E-212 | ||
Gene3D | 43 | 357 | 315 | 3.2E-17 | – | |
Pfam | 53 | 352 | 300 | 4.6E-24 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | Outer membrane | The external membrane of Gram-negative bacteria or certain organelles such as mitochondria and chloroplasts; freely permeable to most ions and metabolites. |
Expression pattern of LotjaGi3g1v0183800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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