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| Field | Value |
|---|---|
| Gene ID | LotjaGi3g1v0202200 |
| Transcript ID | LotjaGi3g1v0202200.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Solute carrier family 40 member 1; TAIR: AT2G38460.1 iron regulated 1; Swiss-Prot: sp|O80905|S40A1_ARATH Solute carrier family 40 member 1; TrEMBL-Plants: tr|A0A072USG9|A0A072USG9_MEDTR Solute carrier family 40 protein; Found in the gene: LotjaGi3g1v0202200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr3:29507009..29514691) extracted from Lotus japonicus Gifu genome v1.2.
CGTTAATGAGAGAATTTGCATTGCATGTTGTTTGGTTGAGGTAACCATTGTGACCCTCACAGAGTCACAGTCAAAAGGAG TGAGGGGAAGAAGAAGAAGAAGAGTAGTCTGTAATGGAAGAAAGCGTGGTCACAATGAAGGAGGAGCCACCGCTAGAAAC CCCTTCTTCTCTAATCACTTATTTATACATTGGCCACTTCTTAACTAGATGGGGTGCCAGGTTCTTCTTTCATTTCTCCC ACTGATTTATTTGATGCAAAATTTTGACATTTTAACATTTTGATTCTTGTTTTTTATTTATAAAATATCCTTCTGTCAGT AAAGTTCTCTCTTTTCAGTTTAATTACCTGACAAAATTGGATGAATTGAAATGCTTGTTTGTCTTCCTAAAAAACCAGAA ATTTGTCTTGATTGGGATATAAAATGTCTCATTAGGTGTTATTATGACTCACCCTAACATATTAATTTAACATGCCTAGC TATTACCAAGTTGGGATATGGACAACATTAGACATGGCTTACAAAATCTTTGTTGGAATCAGTGAATGGTTACACCTTTA CACTAATTTGCTACTTTAGTTTGTAATGGAAGAAAGTGTCACAATGAGGGATCCACTGCCACAAATCCCATCTTCTCTAA TCATCACTTATCTTTACATTGGTCACTTCTTAACTAGATGGGGCAACAGGTTGTTCTTTCCTTTCTCACCATTGCTTTAA ACTAATAAATCAAAATGTGGATATATCACTATCTGCTCCTTGGTTCGTTTGATTTCACTGTCAAAATTTTTTGAGATCCC CCCCTCCCCCTTTTTGTGTCTTTTGTTTCTTGATCGGACAAATCCAGTCAATCACTCATGGGAGTGTTGATTGAAGAGGA ACAATGAAACTCCAGTGAGGAAGAACGGTGAAAAGGTGACTTCCATGGTGCTCCGTTGTTTGCTACGCTCGGGAGGGGAC CCTACGGAAACACTCTGACGCTCAAGTGAGAACATGGGGATAAAAGGGGAAGTGAGATGATGGAGTAGATAGTGTGTACC TTGTGTTCTCTTTAAACTTTGTCTTTATAGAGGTTGACTCGCGTGGTTTGAGGTAGTCATGAGTGCTTAGTACATTTTTT TAGCTTCGTGCCCTTGTCTTGGTTGCCGGTCCATAGTTACTTGATGTGATGTGGTGAAGTGACATAAACATCCTCGGTTT GGTGATTGACCGTGCGACAGTGAGGACATCGTCGCCTATACGAGGGTGGTGATGGTCATGATCGGTGACGGGTTTGATTG GTATGAGGCGATCAAGTTATGGATTGGACATCGTCTGACATTTAGTTATGGATGCCGAGAGGTATGAAAGTGATTGAATC TGGCTATCGGAACAGTAGCCATCTAGCTCTGGTGCGCAGTGAGCTGCGCACTGAGAGGTATATGTGTTCAGGGCAATCAC GCTCAAAGGACCTGGGATCACCATCAGAACTATAGTGACCGGGGATCACCGTCAGAACATTTCTAAAACCCTCCTTCTGC CAATAAATTTTTTCTTTTCAGTTTAATTTCTTCACAAAAAGGAATGAATTGAAATGCATGATTGTCTTCCTGTGAGCTCA GAACTTTGTCATCACTGGAATATAAAATATGACCCACCCTGACATAATAATTTAACACATCTATTACCAAGTTGATATAT TGACCACAGTAGATATGATTTACTTGCACAGCAGGTAAGGTGGTTAGGATCAGTGTTTTGGGTTGAGATTTTCAAAATCA TTGTTGAACCAGTGAAGGGTAACACTATTTAGTATTTACTGCTTTAATTTGTTTTTTTCTTGTGAAATTAAATGAGGACT CTCTGTTTGCAGAATGTGGGAATTCTCTGTTGGTTTATATATGATCCATATCTGGCCAGACTCATTGCTCTATGCAGCAA TATATGGTGCTGTTGAATCTGCCTCCACCGCAGTGTTTGGTCCTATAATTGGAACATGGGTTGATAAGTTAACGTATGTG AAGGTGATTCCTAGTCTTATTGCTAGCACTTCCATTTTATCAGCTGTAAAACTATGTAACACATTTGCTATTTGTTATTG TCATATTAACAGTTACTTAGGAACAATATACAGAGTTATCTTTGGACTGATTATCTTTTTCTTGTGCACAGTGATGGTTA ACTAACTGAAATAAAAAGTTAAAGGTAGATAATGAAACCAGAAATTTCCATTGTGTCTGATACAACAACAAAATTAAAAG ATAAGAGACATTTTCTATTCTACAGGCCTGAAGTTAGGTCTGGAATAGACAGGCTATTGGCAATTTGATTGACAGTGATG AGAAAATGGAGAAACATATAAGTGGAAAGACTTAACGGACCTAGATATTAGGTCAGAACATGGTCTTGCTTCATGCCTAA CCCATTAGTTGCAAATCTCACTGTTAGCTAAAATCCTAATTGATTCTTGTTACTAGAATTTATTTGCTAGGATTCTATCA TAATGTGCTGCTAGAAGTGCCAAAATCTTTCCATTTACTATTTAAAGAATTAGACATCTACAAAATTTAAAGATAACAAA ATGTAGTCTGACAGAAGTGTCTTTAGTTGTTTCAATTTCCTTCATAATTATTTGATTACAAAGTTGCCAATTATGAAGCA ATCCTATCTTCATGTTTAACTGGCAGGTTTTGAAACTGTGGTTGGTGATACAGAATCTCTCTTTCATTATTGCCGGGGCC ACTGTGTTTACCTTACTTGTCTACTCATCTTTGAAGTTTACTTGTTTCTCAGCTTTCATATTGCTGGTTTCTATAACCAA TGTCTGTGGTGGCATTGGGGTGCTTTCAAATCTTGCCGGTACCATCTTGATTGAAAGAGAATGGTAATATTCTTGAGGCT TTAGTGAAAAAAGATTTATATTTGATTAAGCAAGTATAGTGAATATTCTATTGCTTGTATGAAATAGATACCAAAGATTT AGTTTTCACTTTTCACCATCATGTCGTCTCTACAATCTCTCAAGGTTTATAAGTCAGGTAAATACTAGCTGTGTCTATCT ATAAGTTTTGCTTTGTTTCTAGTAGTTCAATTATGGACGATGAGGGGAAAATAGCATTTCACAGTAAGCTTAATGCTTTT ACTGCCTCTCTTCAAAATGTAATGACCCTGGTGATGTTTTATAGCATCACTTGTTGAAGAAAGCTGAATTAAGTGAAATG TCTAGATGAATGATAGCATGAAAAAAATGTATTTATATAGTTTATTTGTACAGGTTGTTAGTTATATCCGAAGGTCAACC CCCGGAATTGCTGACAAAGATGAATTCAGTTACCAGACGCATTGATCTGAGCTGCAAACTTCTTGCTCCTGTTATAACTG GGTTTATAATAAGCTTTGTATCCCTAGAAGCATCTGCTATAACTCTAGCACTCTGGAATACTGTCTCTGTTTGGGTAGAG TATTGGCTTTTTATCTCGGTGTATAAGGGGATTCCAGCTTTGGGCCAAAGTAGCCTGAGGAGGATGACAAGATTTCCACG AAGGGATCTAGAAATGAAGAATTCAACTTCAGAGGGAGATAGCTTGCTTTCTGTTACTGATAGTAACACTGAATTGGCAG ATAGAGAAAGCTGGAACAAAATTTCTGAGTGGATTTCAAGGATCCCTTATATTGATGCATGGAGAGTTTATTTACAGCAA CAAGTTGTGCTACCTGGACTAGCTCTGGCTTTGCTATATTTCACTGTACTCAGGTGAAATATTACAAACATCCATAGAAT TTCACTAGTTACACAGGCACTAGTGTGAACAAAAGGGGCCAAAAATGATGTCAGACATGTCATATTTATAAAGGAGTTTC TTTGATATTTTCAGTTTTACCTCTTTAGAAGCTGTATCAGTATTATTCTATGTGATATGTCAAGGAATTGCACTAGTTAC ACGGGCACACTAGGACCAGCATATCCTTTTCTTTAAGAATAACTATTCTTAGCAAGCTGGTCATTTGTTACAATTGTGCA TCCATTTTTTTGTGAAATTCGCTCTTAGTTTATAAACAAATTGGAAATCCAAGTTAGCAAGGTCTATTGATTATACTGTA TTGGACAAGGTCATTCAGAAAATTTGGTTTCAAACACCCCTTTACTCCTTTAGAAAAATGTATTTGCTTTCAGTCGGGGA TGAAGCCTCACCATTGAAATTCCAATTGCTTGCTTCAGCTTTGGAACTCTAATGACAGCCACATTAGAATGGAAAGGCAT ATCTGCATATGTTATTGGAATGGCACGAGGAATAAGTGCTGTAGTTGGAATCGCTGCAACAGTTCTATATCCTTTGCTGC AGTCTCGCATACCGACAATTAGAACTGGACTTTGGTCGATCGGGTCTCAGGTATAAACCAAAAAATGGCTTAATGACTGC TAGTCAAATTTTAATCTCCTTTCTTTGTGACCTGTTACAGATAATACTTAATCATGTCGGTTGTTCTCCTATGAATCTTT GTCTTGTTCATGTATGTTTTGCATGCAGTGGGCTTGCCTTCTCCCCTGTGTAGCTGCAATAGGGATAAAAAATGGCCTTC TATCATCTTATATTTTGATGGGAAGTGTATCTATATCTCGGCTTGGACTGTGGATGTTTGACTTGTCTGTACTTCAACAA ATGCAGGCAAGAAATAGCCCTTGTTGTCTGAAATCATTTCAGTTGTTTCCTAAAGATTTTTTTTAACTAATGTGAAATTT AGATTTAAATGTCTGATCAATCATAAAAGTTCTCTTTCTTCATAATCATCTTGGTCTGATCTTTTTCAATTTTTTGAAAC AGAACCTTGTGCCAGAATCTGATCGTTTGATTGTTGGAGGTGTTCAGAATTCTCTGCAGTCCTTGATGGATTTATTGGCC TATGTTATGGGAATCATAATATCTGATCCACGGGTGAGTTTTAAAACTATACTTTTATCTGATGCTTTAATGGACTTCAC TACTGATAAGACTTCCTTTTCAACTTTTGAAAGAGAATTCTCTAATTTCACCACCACTAAGTTTGATCTAACAAAGGCGT CTCTAACCACAGAGAAACAGAGTTTTTACATTTCCTTAGTGACCCTATTAAAAAGTTCTAACCTCAGTGAATTATTGCTT ATTCATTGATAGGTGTTCCATAAATACATGTATGCTTAGGTACGGCAAAAGGATAAAACGACCTATATCTCCCTCTTCAT TGGCCTTAGTGCTTGAGGTTAAAAATTCATACCATGTTGCATTTAGTAGCCCATTTCCATTAGTTTCTCTACACCACTAA CTCTGGCCTAAGATTTATTTCTTTATAGTTTCTGTATTACTGATTAAAAGATTATGAACTACTTTAAAAAACTGGTTATT GCTATGCATCTAATGCTTAACAAAATCAGTATATAATTGTGTTGATCCTGTTTTGTGGTCTGTTCAGGACTTTTGGAAGT TGATTCTGTTATCGTTTCTGGCAGTCACATTAGCTGCATTCCTTTACTGCATTCATGTATACCGCGCGGGGAGGCTTATC TTTCACTTTGACAGACTTCTTAAGGGTAAGTTGTTTGTAAGAGCATCTGAAGATGTGAATGTTAGAATTTTACGAATTTT CCTTTATTTAGACATAAGTTGTGTACGCATTTTCATGTTATTAAAATATGAGTTGAATGTACGACATGATATATTTTTCT CTTTGAGCCTATTTTTCTAATGTGGCCTATTTTGGGTTTTGGAAATCATGATGTAATATAGGGAGTTAGATTTTTGCACC TCCCTAAGCTCCTATTTACACACCCCATTTAAAAAAAAAATTAATTACAAAAATCTCTTTTAGTTAAAAATACACACACA CACACACCCTTTAGCAAACCCTAAACCATTCTTTTTCTGGTTCTCACTCCATGTCTTCTATCTTTTCGGTGATCTTGGCA CTCTATCCACCATAGGTGAGATTTCTATTGAGAATTTAACATATGTGAAATTGAAGCTTTGGGAGTAAAATTTTACAATT TTTGTTACACTTTAGGAAGTTGAAGTTTTGGGAGCAAAATTTTAAATTTCCAGCACTTGAAGTTCCAGAAGTGTATTTAT GTCAATATAAGTTCAGAATAGAAATTTTTTAAGATTTTGGAAGTGTAATTTTCATTTCCGAAATCTTGAATTCCATAAGT AAATCCACTTTCACTTCTGGAAGTGAATTTATCTCTTGAAGCTAAAAGACTTTTCTACTATGGAACTTCAAGTTTTTAAG ATTGAAAATTCAGCTTCCAGAACTGGAACTTGTAATTTTCTCTTATGGAAGCTGGAGCTCCTAATGGAAAAAACTTACTC TTTCAAGTTTCAGAAGCTAAGAAATTTCAATTTTGGAACTCGATATTCTGAATTGCATTTAACTTGGTATAATTAACTCA AGTTTCAAAATTGAATTTTTTTCTTCCGGAACTTGAACTTTTTAAAGAAGAAAACTTTAATATGATGTGTTTTTTACTAC ACAATATACTGTGATCTGTTTTTGTCTTTTCTTTTTGAGTTATTTCATCATCCCCAGGAGCAAATGTGGAAGAATATTCA AGTTCAAATTACAATCCATCGGAAGAAGAGGACATACCAAGAAATACTTGTAACAATGACGAGGTAATAGTAACACTTCA TATATGCATTAACACTCTTTATCATTCAACTGAGGTATAGCTAAGGGTTTCTACAATCATGTTACTTTTCTATATTTATT TATTTTCCCCTTTAAACACGTGATCATTCTTTTTCATGGATTTCAATTTTGTTCTTAGGTTAATGTCAAGGTTCTTCAAT TTTTTGTGTTCTTGATGGAACTTTAATTTTTCAATTGCAAAACTCCTTAATTAACAGTCATCAAGTTTATATTGAAATTT CTGTGACATTCCGGACTGACACAGTAACATTATGTTCTGTTCAATTTATAGAATCCAGCTTAATGCAAGTCAAGCTACAA GCCTATCAGCCTATGGGTCTTAAGGTTTGTTGAGGCTTTTCCAAAAACAATGTGTTAAAGCATAATTTTGTAATCTTACA TGTTGTGTAGGTTCTGATTTGCGTGGATAAATCTAGCAGGTTGAAAGGGTGTTTTGGGGATGGTTGCTTACAATGAAAGA TAAGCAAGCCACGAGCCCAGTGAGTGTTTTGCTTGTTGGTACATGTCTAATTCTCATTATAAGTAAAATCTCGAATTCGA GCATTGCAAAACTCTTCTAGGAGAGTTAGCCCTACCATAATGTAAATGTTTCCGATTAGAACAAGATTGTCTCCCAAGAA GGATATATATATATATTTTCTGAAATGAGTGTCTACACATACTTTGTGGTGTCTATGAATAATCTTCCAGAAAGAGTACA AACTTACTATACAGTTTATGGCTACATTTACTCAACCTAGTGGGTGCATCCAATATATCCTCTTTGATGCATTCGGTTGG AGCTAGTGAAAAAGAAATGGATCTCTCACGCAGCAGCCAATTCACAGCAAAGCATATTTATGAGCTATTTCAACTATTGG ATTTTACCGAGTTGCACAATTATTTGGTGCAAGAGTTAAAGTGTAAAACCCTCTTCTCTCCCAAAATTTCTGTTCCTTTT TACTTTCTAAATCAGCATATACTAAGTTGCATAATGTTTTGGATCCATTATTGAGGATTAGAGTAAAATAGATTTTTTTT TTT
CDS sequence (LotjaGi3g1v0202200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTGGGAATTCTCTGTTGGTTTATATATGATCCATATCTGGCCAGACTCATTGCTCTATGCAGCAATATATGGTGCTGT TGAATCTGCCTCCACCGCAGTGTTTGGTCCTATAATTGGAACATGGGTTGATAAGTTAACGTATGTGAAGGTTTTGAAAC TGTGGTTGGTGATACAGAATCTCTCTTTCATTATTGCCGGGGCCACTGTGTTTACCTTACTTGTCTACTCATCTTTGAAG TTTACTTGTTTCTCAGCTTTCATATTGCTGGTTTCTATAACCAATGTCTGTGGTGGCATTGGGGTGCTTTCAAATCTTGC CGGTACCATCTTGATTGAAAGAGAATGGTTGTTAGTTATATCCGAAGGTCAACCCCCGGAATTGCTGACAAAGATGAATT CAGTTACCAGACGCATTGATCTGAGCTGCAAACTTCTTGCTCCTGTTATAACTGGGTTTATAATAAGCTTTGTATCCCTA GAAGCATCTGCTATAACTCTAGCACTCTGGAATACTGTCTCTGTTTGGGTAGAGTATTGGCTTTTTATCTCGGTGTATAA GGGGATTCCAGCTTTGGGCCAAAGTAGCCTGAGGAGGATGACAAGATTTCCACGAAGGGATCTAGAAATGAAGAATTCAA CTTCAGAGGGAGATAGCTTGCTTTCTGTTACTGATAGTAACACTGAATTGGCAGATAGAGAAAGCTGGAACAAAATTTCT GAGTGGATTTCAAGGATCCCTTATATTGATGCATGGAGAGTTTATTTACAGCAACAAGTTGTGCTACCTGGACTAGCTCT GGCTTTGCTATATTTCACTGTACTCAGCTTTGGAACTCTAATGACAGCCACATTAGAATGGAAAGGCATATCTGCATATG TTATTGGAATGGCACGAGGAATAAGTGCTGTAGTTGGAATCGCTGCAACAGTTCTATATCCTTTGCTGCAGTCTCGCATA CCGACAATTAGAACTGGACTTTGGTCGATCGGGTCTCAGTGGGCTTGCCTTCTCCCCTGTGTAGCTGCAATAGGGATAAA AAATGGCCTTCTATCATCTTATATTTTGATGGGAAGTGTATCTATATCTCGGCTTGGACTGTGGATGTTTGACTTGTCTG TACTTCAACAAATGCAGAACCTTGTGCCAGAATCTGATCGTTTGATTGTTGGAGGTGTTCAGAATTCTCTGCAGTCCTTG ATGGATTTATTGGCCTATGTTATGGGAATCATAATATCTGATCCACGGGACTTTTGGAAGTTGATTCTGTTATCGTTTCT GGCAGTCACATTAGCTGCATTCCTTTACTGCATTCATGTATACCGCGCGGGGAGGCTTATCTTTCACTTTGACAGACTTC TTAAGGGAGCAAATGTGGAAGAATATTCAAGTTCAAATTACAATCCATCGGAAGAAGAGGACATACCAAGAAATACTTGT AACAATGACGAGAATCCAGCTTAA
Protein sequence (LotjaGi3g1v0202200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MWEFSVGLYMIHIWPDSLLYAAIYGAVESASTAVFGPIIGTWVDKLTYVKVLKLWLVIQNLSFIIAGATVFTLLVYSSLK FTCFSAFILLVSITNVCGGIGVLSNLAGTILIEREWLLVISEGQPPELLTKMNSVTRRIDLSCKLLAPVITGFIISFVSL EASAITLALWNTVSVWVEYWLFISVYKGIPALGQSSLRRMTRFPRRDLEMKNSTSEGDSLLSVTDSNTELADRESWNKIS EWISRIPYIDAWRVYLQQQVVLPGLALALLYFTVLSFGTLMTATLEWKGISAYVIGMARGISAVVGIAATVLYPLLQSRI PTIRTGLWSIGSQWACLLPCVAAIGIKNGLLSSYILMGSVSISRLGLWMFDLSVLQQMQNLVPESDRLIVGGVQNSLQSL MDLLAYVMGIIISDPRDFWKLILLSFLAVTLAAFLYCIHVYRAGRLIFHFDRLLKGANVEEYSSSNYNPSEEEDIPRNTC NNDENPA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 451 | 451 | 5.3E-186 | – | |
| Pfam | 1 | 429 | 429 | 1.1E-145 | ||
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 451 | 451 | 5.3E-186 | ||
| CDD | 1 | 439 | 439 | 4.35313E-124 | – | |
| SUPERFAMILY | 6 | 442 | 437 | 6.8E-15 | ||
| TMHMM | 20 | 42 | 23 | - | – | |
| Phobius | 20 | 42 | 23 | - | – | |
| Phobius | 43 | 53 | 11 | - | – | |
| TMHMM | 54 | 76 | 23 | - | – | |
| Phobius | 54 | 78 | 25 | - | – | |
| Phobius | 79 | 83 | 5 | - | – | |
| Phobius | 84 | 107 | 24 | - | – | |
| TMHMM | 86 | 108 | 23 | - | – | |
| Phobius | 108 | 144 | 37 | - | – | |
| TMHMM | 141 | 160 | 20 | - | – | |
| Phobius | 145 | 170 | 26 | - | – | |
| Phobius | 171 | 175 | 5 | - | – | |
| TMHMM | 175 | 197 | 23 | - | – | |
| Phobius | 176 | 197 | 22 | - | – | |
| Phobius | 198 | 259 | 62 | - | – | |
| Phobius | 260 | 284 | 25 | - | – | |
| TMHMM | 261 | 283 | 23 | - | – | |
| Phobius | 285 | 289 | 5 | - | – | |
| Phobius | 290 | 315 | 26 | - | – | |
| TMHMM | 293 | 315 | 23 | - | – | |
| Phobius | 316 | 326 | 11 | - | – | |
| Phobius | 327 | 346 | 20 | - | – | |
| Phobius | 347 | 351 | 5 | - | – | |
| Phobius | 352 | 375 | 24 | - | – | |
| Phobius | 376 | 386 | 11 | - | – | |
| Phobius | 387 | 412 | 26 | - | – | |
| Phobius | 413 | 417 | 5 | - | – | |
| Phobius | 418 | 438 | 21 | - | – | |
| TMHMM | 421 | 443 | 23 | - | – | |
| Phobius | 439 | 487 | 49 | - | – | |
| MobiDBLite | 465 | 487 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Iron ion transmembrane transporter activity | Enables the transfer of iron (Fe) ions from one side of a membrane to the other. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Biological process | Iron ion transmembrane transport | A process in which an iron ion is transported from one side of a membrane to the other by means of some agent such as a transporter or pore. |
Expression pattern of LotjaGi3g1v0202200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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