Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi3g1v0244100.2

Overview

Field Value
Gene ID LotjaGi3g1v0244100
Transcript ID LotjaGi3g1v0244100.2
Related isoforms 7
Lotus japonicus genome version Gifu v1.2
Description sucrose synthase 3; TAIR: AT1G78800.1 UDP-Glycosyltransferase superfamily protein; Swiss-Prot: sp|Q9H553|ALG2_HUMAN Alpha-1,3/1,6-mannosyltransferase ALG2; TrEMBL-Plants: tr|C6TI07|C6TI07_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi3g1v0244100
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr3:39799378..39803619) extracted from Lotus japonicus Gifu genome v1.2.

GTTTTTCAACTTTCAACTAATTTATCAGTTAAACTCGTCAAAGATAGCCATAATATAGGAGGGAATAGCCTGAGCTACAA TTTTAATTAAAATATTTTGCGATCATGCTATTAATGTTTGCCCAAAGACCATGAGGTAAAACAAAACATGACATTCCATG TATGTTTTCTCGCCGTACGCATTGACCACCAACCCTACTCCGCCGCCGCCAACGTTATCACCGCCGATCTCTGTTGCTGC CAACAGTATCATTCCGATCTCCGCCCTATTACGCCATGGTTCGCCACTCAAACCATTGGAATCGCACTCTCTGGTTCTGA TGTAAGCCTAAACGTTTCCTCTTTGCTTCGATTTAGAATTCAATTTTAGCTAAATCTTCGTTTTCTACCTCATTCATTTC TGTTTCTCACATTTCTTTCATTCAACCCACTGGTTTCTTAAATTCTTCTTCGATTTCTTCTTCGTTTTCACGGCAATTTC ATTTTTGATTTCTCACTCGCACTATATTTTCGCGATCTGCAATCAGAATCGGTTATCTTGAAGTTGATCACTCTCGTGCT TATTGCTTCCGTGAGGCTGAAAGTATTTGATCCACTAATTTGATATTTGATCATTGCGGTGCTTATTGTTTGTTACAGCT CAACCTGCATTTTCTCTTTCACCTTGGCATCTTAGATTGAAATCAAGGTCAGTGCATCAAATTCAATTGTATGTTATACT AAGTCTTTAGCTTGTGTTTTTGTGACTGGATATGCTTGGGAAACTACATTGACATGATTATAGCTGTGTGCTGCTGATGG CCCGCCACCGTCACAACCTCAGAATCTCTGGCAGTGATTGATTTCTGATTTGCTATTTTCATCTTCAATTTCCCACTCAA CATGGCAAAGGGCACAAGCTCAGAGATGAACATTGCCATTATCCACCCTGATCTTGGCATAGGCAATAATTAACTGCCCT TTATTCTATTCGAATCAAAATCAAAAAAAATTCTGTGCCCATTAATTTTTTTCTTCCCTATACTTACAGTTGATTCTTAT TACCTTGTGATTGTTTTGCAGGTGGAGCTGAAAGATTGATCGTTGATGCAGCTGTTGAGCTTGCATCCCATGGTCATAAT GTTCATGTTTTTACTGCTCATCATGATCGAAATCGATGTTTTGAGGAAACTGTTGCTGGTGAATCTCTGTCTTTGTATAT ATATGTGTCTGTGATTGCCACATTTTGTGTTCTTTATAAGGAAATGCATTGTGTTAAGATATAGTTTGACTTGTAATTGT TTCAGGTACATTTCCTGTTACTGTCTATGGTTCCTTTCTTCCGCGGCATATATTCTACCGTCTTCATGCATTGTGTGCTT ACCTTCGATGCCTATTTGTTGCTTTCTGTGTGCTTTTCATGTGGCCATCATTTGATGTTATACTGGCTGATCAGGTCTCT GTAGTCATTCCCATTTTGAAGCTTAAAAGGTCAACAAAGGTAGCTAGCAATAAGAATCATGTGTTGTAAATTCAAGTTTT GGCATTCACGGTTCGTCTTAGTTGCTTATTTTTCTTGCTAGGTTGTGTTCTACTGTCATTTTCCTGACTTGTTGCTGGCT CAGCATACAACTTTTGTTCGGAGGATGTATAGGAAACCCATAGACTATGTAGAAGAAATAACAACTGGTTGGACTTTGTA TTCTTGCTTTATGTTTATTTATTTATTTCTGAACAAGGTTTTAAATTGTGGTCACATCACGGTTGCGTTGCGGTCCTTCA TATTGTGATTAAACATGGCTGTTGCGTCCAAATCGCGGTCGGGCTCCAAAACCTTGATGTTGCGGACCTTGATTTAAAAC CATGTTTCTGAACTTCTTTTCTCACTTGTAATCAAGCATCTTATTAAGCATTGCTAAATTGCAGGAATGGCTGATTTGGT ACTTGTCAACAGCAACTTCACTAAATCTACTTTTGCAAATACGTTTAAGCAACTAGATGCTAAAGGAATTCGACCAGCTG TTCTATACCCAGCAGTCAATGTGGATCAGTTCAATGAACCCACTTCCTTTAGGTAAATGACATGTTTGTAGATGTATGGT CAATACAAGATTATGCATGTAGCTTATTCTTATAACCAATTTTATTATAATTATGCTTCTGCTGTATTTTTTTTCCTGTT GTAGGCTGAATTTTCTTTCCATTAACCGCTTTGAGAGGAAGAAGAACATAGAGTTAGCAATTTCAGCTTTTTCTATGCTT TGCTCACCTAATGGACTTCTTAAAAATCAAGATACTACCGATGCTTCTTTGATTGTTGCAGGTCAGTATGTTTTTCTTAT GACTTCACATTTCTTAAGACAGATTGATAGATATTAGATGGTATGCTCATTATTAACTGTTCTGGGGATGTCTGTCATGA CTCATGATGTATGTGCCTTAGACTGGAGTTTGGTAAAGCAGTGTCTTAGTTATGTTTGGTTCTTAGTAATGTTTTAAATT CTTGTATTATTTTTCAATCATTTCAAAAGACTTGTTTGTTCTGCGGAATCTTCTCAATAACACAGCTTGTTGGTAAATTA TCTTTGTGAAGCTTTCTTGGTTCAATCATTTCAATCAGATGCATTAGCTTGGATTTGTTGTTGTGTTTTACTTCGAACCT TTATATAACTGACGTGGAAACTGCATGAAGTTTATTTTCTTATGTATTAAAAATGAGTTGTTAATTTTTATAAACCGTTA TTTGGTGACAGAAAGTTCATTTATTGATCTTGTAAGTATAATGCTATATAGCCCATAGTATGAGGTGTTTAGTACATAGT TATATCTATATTGCCAATGTTATCATGAAGAAACTGATTGAGATGATGATGTTTTGTATCATGATAAGTTTTTGGTGCCA GTCAATTCATTAATCTAAAAATTAAAATATGAATGAGAAATTTATCTATCTCTACCATTTTGGTGTGTTAGTTTAGTTAT ATTTAAAGGCCTTCTTGTTGCACTCAGCTTTGATTTATATATACATTTTCTTGGCAGTATAACTGGGTCCTAAGTTTGAA GTTTAACCAGCCATACTTATTATTTCAATTGAAGCATTAGGCGCAATTTGAGAGTATAAAATCTATTTTCATAAATTGTT CCAGGTGGTTTTGATAAGCGGTTGAAGGAGAGTGTGGAGTACTTGGAAGAGCTTAAAAATTTAGCTGAAAGGGAAGGGGT CTCTAACCAAATAAGATTCATCACATCTTGCACTACAGCTGAAAGGAACACTCTTCTTTCAGAATGCCTATGTGTACTTT ACACGCCAAAGGTATGTGAAACCTTATTATGATTCCTGAAAATTGGTAGAAGTTGACTTAAGAGTTTTACATTAAGATCT TCGATACAGGATGAACACTTTGGCATTGTTCCTATAGAGGCAATGGCAGCTTATAAACCTGTTATTGCGTGCAATAGTGG TGGCCCGGTGGAGTCAATCAAGAATGGTGAAACAGGATTCCTTTGCGATCCTACACCACAGAAGTTTGCTTCAGCAATGG CTAGCCTCATAAATGATCCTCAGGGAGCAGAAAGAATGGGCAGAGAAGCTAGGAGGCATGTTGTTGAGTCATTCTCTACA AAGACATTTGGCGAACGTTTAAATAGATATTTAGTTGACATTCACCGGGAGAAGGAGGATTGAGTTTAAGATATTTTTCC CTCAAATTGTTAACTGCAATTGCTGACCATTGAAGGCACTGTAGTTAACATTTTTGCCAAAATTTCTATTTAAGATGATT TTTATTTTATACCATGTAAATTTTTACCTGAGAGGATCACATGTTCAATGTTGAGGCTTGCACTTTTGGATATTTGCAGA CATTATAAATGCATTGCAAAGTTTATAGAGAAATTTTCTGTGCTATATTAGAACCCTAGTGCTGATCCAATTTTGATTTC AAAGTGAAAAAAGGACCGAGCCAGGATCATGATAGTTGTGGTTTGCTTAGGGGACCAGTATCAGTTCAATTTTGCAAAAG AAACTGAACACCCAGTGAAGGCATAGTGGCCTCCTATGTTGTTAACAAACTCTTAGCAAAAAGCAGAACTAAGTTGGTAC ATTGAAGCTCAAAATCTTTCACCAATACTTGTCCCTCTCTTTTCTTGCATGTTGTGAATGTTAACCAAAAACTGTGTTTT GCGTCTAAGCTTTATTTCAGTAAAAGCTAAACTTGGGACAATTTGTTAATGGTCCAACTCTCCTATATGAGAACTGGGAA GG
Download Genomic Sequence

CDS sequence (LotjaGi3g1v0244100.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTGGCCATCATTTGATGTTATACTGGCTGATCAGGTCTCTGTAGTCATTCCCATTTTGAAGCTTAAAAGGTCAACAAA GGTTGTGTTCTACTGTCATTTTCCTGACTTGTTGCTGGCTCAGCATACAACTTTTGTTCGGAGGATGTATAGGAAACCCA TAGACTATGTAGAAGAAATAACAACTGGAATGGCTGATTTGGTACTTGTCAACAGCAACTTCACTAAATCTACTTTTGCA AATACGTTTAAGCAACTAGATGCTAAAGGAATTCGACCAGCTGTTCTATACCCAGCAGTCAATGTGGATCAGTTCAATGA ACCCACTTCCTTTAGGCTGAATTTTCTTTCCATTAACCGCTTTGAGAGGAAGAAGAACATAGAGTTAGCAATTTCAGCTT TTTCTATGCTTTGCTCACCTAATGGACTTCTTAAAAATCAAGATACTACCGATGCTTCTTTGATTGTTGCAGGTGGTTTT GATAAGCGGTTGAAGGAGAGTGTGGAGTACTTGGAAGAGCTTAAAAATTTAGCTGAAAGGGAAGGGGTCTCTAACCAAAT AAGATTCATCACATCTTGCACTACAGCTGAAAGGAACACTCTTCTTTCAGAATGCCTATGTGTACTTTACACGCCAAAGG ATGAACACTTTGGCATTGTTCCTATAGAGGCAATGGCAGCTTATAAACCTGTTATTGCGTGCAATAGTGGTGGCCCGGTG GAGTCAATCAAGAATGGTGAAACAGGATTCCTTTGCGATCCTACACCACAGAAGTTTGCTTCAGCAATGGCTAGCCTCAT AAATGATCCTCAGGGAGCAGAAAGAATGGGCAGAGAAGCTAGGAGGCATGTTGTTGAGTCATTCTCTACAAAGACATTTG GCGAACGTTTAAATAGATATTTAGTTGACATTCACCGGGAGAAGGAGGATTGA
Download CDS Sequence

Protein sequence (LotjaGi3g1v0244100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MWPSFDVILADQVSVVIPILKLKRSTKVVFYCHFPDLLLAQHTTFVRRMYRKPIDYVEEITTGMADLVLVNSNFTKSTFA NTFKQLDAKGIRPAVLYPAVNVDQFNEPTSFRLNFLSINRFERKKNIELAISAFSMLCSPNGLLKNQDTTDASLIVAGGF DKRLKESVEYLEELKNLAEREGVSNQIRFITSCTTAERNTLLSECLCVLYTPKDEHFGIVPIEAMAAYKPVIACNSGGPV ESIKNGETGFLCDPTPQKFASAMASLINDPQGAERMGREARRHVVESFSTKTFGERLNRYLVDIHREKED
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45918:SF1
1 308 308 1.5E-137 –
CDD
cd03805
1 297 297 4.66915E-159 –
PANTHER
PTHR45918
1 308 308 1.5E-137
IPR027054
SUPERFAMILY
SSF53756
6 300 295 1.44E-54 –
Gene3D
G3DSA:3.40.50.2000
81 289 209 7.5E-46 –
Pfam
PF00534
115 282 168 3.0E-37
IPR001296

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0004378
Molecular function GDP-Man:Man1GlcNAc2-PP-Dol alpha-1,3-mannosyltransferase activity Catalysis of the reaction: beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP-alpha-D-mannose = alpha-D-Man-(1->3)-beta-D-Man-(1->4)-beta-D-GlcNAc-(1->4)-D-GlcNAc-diphosphodolichol + GDP + H+. This reaction is the transfer of an alpha-D-mannosyl residue from GDP-mannose into lipid-linked oligosaccharide, forming an alpha-(1->3)-D-mannosyl-D-mannose linkage.
Subterm of
GO:0006486
Biological process Protein glycosylation A protein modification process that results in the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid, e.g. the addition of glycan chains to proteins.
Subterm of
Part of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi3g1v0244100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…